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  1. 1
    IDBA – A Practical Iterative de Bruijn Graph De Novo Assembler

    IDBA – A Practical Iterative de Bruijn Graph De Novo Assembler mā Yu Peng, Henry C. M. Leung, Siu‐Ming Yiu, Francis Y. L. Chin

    I whakaputaina 2010
    Whiwhi kuputuhi katoa
    Capítulo de Livro
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  2. 2
    Read mapping on de Bruijn graphs

    Read mapping on de Bruijn graphs mā Antoine Limasset, Bastien Cazaux, Éric Rivals, Pierre Peterlongo

    I whakaputaina 2016
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  3. 3
    Variable-Order de Bruijn Graphs

    Variable-Order de Bruijn Graphs mā Christina Boucher, Alex Bowe, Travis Gagie, Simon J. Puglisi, Kunihiko Sadakane

    I whakaputaina 2015
    Whiwhi kuputuhi katoa
    Artigo
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  4. 4
    Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph

    Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph mā Gaëtan Benoit, Claire Lemaitre, Dominique Lavenier, Erwan Drézen, Thibault Dayris, Raluca Uricaru, Guillaume Rizk

    I whakaputaina 2015
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  5. 5
    The khmer software package: enabling efficient nucleotide sequence analysis

    The khmer software package: enabling efficient nucleotide sequence analysis mā Michael R. Crusoe, Hussien F. Alameldin, Sherine Awad, Elmar Boucher, Adam Caldwell, Reed A. Cartwright, Amanda Charbonneau, Bede Constantinides, Greg Edvenson, Scott Fay, Jacob Fenton, Thomas Fenzl, Jordan Fish, Leonor García-Gutierrez, Phillip Garland, Jonathan Gluck, Iván González, Sarah Guermond, Jiarong Guo, Aditi Gupta, Joshua R. Herr, Adina Howe, Alex Hyer, Andreas Härpfer, Luiz Irber, Rhys Kidd, David Lin, Justin Lippi, Tamer Mansour, Pamela McA'Nulty, Eric McDonald, Jessica E. Mizzi, Kevin Murray, Joshua Nahum, Kaben Nanlohy, Alexander J. Nederbragt, Humberto Ortiz‐Zuazaga, Jeramia Ory, Jason Pell, Charles Pepe‐Ranney, Zachary N. Russ, Erich M. Schwarz, Camille Scott, Josiah Seaman, Scott Sievert, Jared T. Simpson, Connor T. Skennerton, James S. Spencer, S. Ramakrishnan, Daniel Standage, James A. Stapleton, Susan R. Steinman, J.J. Stein, Benjamin Taylor, Will Trimble, Heather L. Wiencko, Michael Wright, Brian Wyss, Qingpeng Zhang, en zyme, C. Titus Brown

    I whakaputaina 2015
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Pré-impressão
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  6. 6
    On the Representation of de Bruijn Graphs

    On the Representation of de Bruijn Graphs mā Rayan Chikhi, Antoine Limasset, Shaun D. Jackman, Jared T. Simpson, Paul Medvedev

    I whakaputaina 2014
    Whiwhi kuputuhi katoa
    Capítulo de Livro
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  7. 7
    SEQuel: improving the accuracy of genome assemblies

    SEQuel: improving the accuracy of genome assemblies mā Roy Ronen, Christina Boucher, Hamidreza Chitsaz, Pavel A. Pevzner

    I whakaputaina 2012
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  8. 8
    Assembly algorithms for next-generation sequencing data

    Assembly algorithms for next-generation sequencing data mā Jason Miller, Sergey Koren, Granger Sutton

    I whakaputaina 2010
    Whiwhi kuputuhi katoa
    Revisão
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  9. 9
    Parallel De Bruijn Graph Construction and Traversal for De Novo Genome Assembly

    Parallel De Bruijn Graph Construction and Traversal for De Novo Genome Assembly mā Evangelos Georganas, Aydın Buluç, Jarrod Chapman, Leonid Oliker, Daniel S. Rokhsar, Katherine Yelick

    I whakaputaina 2014
    Whiwhi kuputuhi katoa
    Artigo
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  10. 10
    Comparison of the two major classes of assembly algorithms: overlap-layout-consensus and de-bruijn-graph

    Comparison of the two major classes of assembly algorithms: overlap-layout-consensus and de-bruijn-graph mā Zhenyu Li, Y. Chen, Dezhi Mu, Jianying Yuan, Yongyong Shi, Haiyang Zhang, Jinping Gan, Ning‐Zhe Li, Xuesong Hu, B. Liu, Bin Yang, Wei Fan

    I whakaputaina 2011
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Revisão
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  11. 11
    HipMer

    HipMer mā Evangelos Georganas, Aydın Buluç, Jarrod Chapman, Steven Hofmeyr, Chaitanya Aluru, Rob Egan, Leonid Oliker, Daniel S. Rokhsar, Katherine Yelick

    I whakaputaina 2015
    Whiwhi kuputuhi katoa
    Artigo
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  12. 12
    Exploiting sparseness in de novo genome assembly

    Exploiting sparseness in de novo genome assembly mā Chengxi Ye, Zhanshan Sam, Charles H. Cannon, Mihai Pop, Douglas W. Yu

    I whakaputaina 2012
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  13. 13
    De novo assembly and genotyping of variants using colored de Bruijn graphs

    De novo assembly and genotyping of variants using colored de Bruijn graphs mā Zamin Iqbal, Mario Cáccamo, Isaac Turner, Paul Flicek, Gil McVean

    I whakaputaina 2012
    Whiwhi kuputuhi katoa
    Artigo
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  14. 14
    Disk-based k-mer counting on a PC

    Disk-based k-mer counting on a PC mā Sebastian Deorowicz, Agnieszka Debudaj-Grabysz, Szymon Grabowski

    I whakaputaina 2013
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  15. 15
    Maximum Likelihood Genome Assembly

    Maximum Likelihood Genome Assembly mā Paul Medvedev, Michael Brudno

    I whakaputaina 2009
    Whiwhi kuputuhi katoa
    Artigo
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  16. 16
    Cactus Graphs for Genome Comparisons

    Cactus Graphs for Genome Comparisons mā Benedict Paten, Mark Diekhans, Dent Earl, John St. John, Jian Ma, Bernard Suh, David Haussler

    I whakaputaina 2011
    Whiwhi kuputuhi katoa
    Artigo
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  17. 17
    How to apply de Bruijn graphs to genome assembly

    How to apply de Bruijn graphs to genome assembly mā Phillip E. C. Compeau, Pavel A. Pevzner, Glenn Tesler

    I whakaputaina 2011
    Whiwhi kuputuhi katoa
    Artigo
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  18. 18
    Comparative analysis of de novo transcriptome assembly

    Comparative analysis of de novo transcriptome assembly mā Kaitlin Clarke, Yi Yang, Ronald Marsh, Linglin Xie, Zhang Ke K.

    I whakaputaina 2013
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  19. 19
    Readjoiner: a fast and memory efficient string graph-based sequence assembler

    Readjoiner: a fast and memory efficient string graph-based sequence assembler mā Giorgio Gonnella, Stefan Kurtz

    I whakaputaina 2012
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  20. 20
    Rapid hybrid de novo assembly of a microbial genome using only short reads: Corynebacterium pseudotuberculosis I19 as a case study

    Rapid hybrid de novo assembly of a microbial genome using only short reads: Corynebacterium pseudotuberculosis I19 as a case study mā Louise Cerdeira, Adriana Ribeiro Carneiro, Rommel Thiago Jucá Ramos, S. Almeida, Vivian D ́Afonseca, Maria Paula Cruz Schneider, Jan Baumbach, Andreas Tauch, John Anthony McCulloch, Vasco Azevedo, Artur Silva

    I whakaputaina 2011
    Whiwhi kuputuhi katoa
    Artigo
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