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How many DNA markers are needed to reveal cryptic fungal species? Autor Sudhagar V. Balasundaram, Ingeborg Bjorvand Engh, Inger Skrede, Håvard Kauserud

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Reassortment and distinct evolutionary dynamics of Rift Valley Fever virus genomic segments Autor Caio C. M. Freire, Atila Iamarino, Peinda O. Ly Soumaré, Ousmane Faye, Amadou A. Sall, Paolo M. A. Zanotto

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Taxonomy, phylogeny and molecular epidemiology of Echinococcus multilocularis: From fundamental knowledge to health ecology Autor Jenny Knapp, Bruno Gottstein, Urmas Saarma, Laurence Millon

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Circadian systems biology: When time matters Autor Luise Fuhr, Mónica Abreu, J. Patrick Pett, Angela Relógio

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Multiple origins of Heliozoa from flagellate ancestors: New cryptist subphylum Corbihelia, superclass Corbistoma, and monophyly of Haptista, Cryptista, Hacrobia and Chromista Autor Thomas Cavalier‐Smith, Ema E. Chao, Rhodri Lewis

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Phylogenetic characterization of Central/Southern European lineage 2 West Nile virus: analysis of human outbreaks in Italy and Greece, 2013–2014 Autor Luisa Barzon, Anna Papa, Enrico Lavezzo, Elisa Franchin, Monia Pacenti, Alessandro Sinigaglia, Giulia Masi, Marta Trevisan, Laura Squarzon, Stefano Toppo, E. Papadopoulou, Norbert Nowotny, Sebastian Ulbert, Antonio Piralla, Francesca Rovida, Fausto Baldanti, Elena Percivalle, Giorgio Palù

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Estimating Maximum Likelihood Phylogenies with PhyML Autor Stéphane Guindon, Frédéric Delsuc, Jean-François Dufayard, Olivier Gascuel

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Psychrophilic fungi from the world's roof Autor M. Wang, Xianzhi Jiang, Wenping Wu, Yan Hao, Yue Su, Lei Cai, Meichun Xiang, X. Liu

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ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses Autor Jennifer Fouquier, Jai Ram Rideout, Evan Bolyen, John Chase, Arron Shiffer, Daniel McDonald, Rob Knight, J. Gregory Caporaso, Scott T. Kelley

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Ancient Neotropical origin and recent recolonisation: Phylogeny, biogeography and diversification of the Riodinidae (Lepidoptera: Papilionoidea) Autor Marianne Espeland, Jason P. W.‏ Hall, Philip J. DeVries, David C. Lees, Mark Cornwall, Yu‐Feng Hsu, Li-Wei Wu, Dana L. M. Campbell, Gerard Talavera, Roger Vila, Shayla Salzman, Sophie Ruehr, David J. Lohman, Naomi E. Pierce

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Taxonomic Resolutions Based on 18S rRNA Genes: A Case Study of Subclass Copepoda Autor Shu Wu, Jie Xiong, Yuhe Yu

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Refining the phylum Chlorobi by resolving the phylogeny and metabolic potential of the representative of a deeply branching, uncultivated lineage Autor Jennifer Hiras, Yu‐Wei Wu, Stephanie A. Eichorst, Blake A. Simmons, Steven W. Singer

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Localization of the ribosomal genes in Caenorhabditis elegans chromosomes by in situ hybridization using biotin-labeled probes. Autor Donna G. Albertson

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DNA barcode reference library for Iberian butterflies enables a continental-scale preview of potential cryptic diversity Autor Vlad Dincă, Sergio Montagud Alario, Gerard Talavera, Juan L. Hernández‐Roldán, Miguel L. Munguira, Enrique García‐Barros, Paul D. N. Hebert, Roger Vila

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ddRAD-seq phylogenetics based on nucleotide, indel, and presence–absence polymorphisms: Analyses of two avian genera with contrasting histories Autor Jeffrey M. DaCosta, Michael D. Sorenson

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An Orthology-Based Analysis of Pathogenic Protozoa Impacting Global Health: An Improved Comparative Genomics Approach with Prokaryotes and Model Eukaryote Orthologs Autor Rafael R. C. Cuadrat, Sérgio Manuel da Serra Cruz, Diogo A. Tschoeke, Edno Silva, Frederico Tosta, Henrique Jucá, Rodrigo Jardim, María Luiza Machado Campos, Marta Mattoso, Alberto M. R. Dávila

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ConStrains identifies microbial strains in metagenomic datasets Autor Chengwei Luo, Rob Knight, Heli Siljander, Mikael Knip, Ramnik J. Xavier, Dirk Gevers

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Morphogenetic characterisation, date of divergence, and evolutionary relationships of malaria vectors Anopheles cruzii and Anopheles homunculus Autor Camila Lorenz, José Salvatore Leister Patané, Lincoln Suesdek

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Rearrangement and evolution of mitochondrial genomes in parrots Autor Jessica R. Eberhard, Timothy F. Wright

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Sequence variation of the glycoprotein gene identifies three distinct lineages within field isolates of viral haemorrhagic septicaemia virus, a fish rhabdovirus. Autor Abdenour Benmansour, P. de Kinkelin, Bernardo Basurco, Annabelle Monnier, James R. Winton, P Vende

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