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Normalizing DNA Microarray Data Dahkki Martin Bilban, Lukas K. Buehler, Steven R. Head, Gernot Desoyé, Vito Quaranta

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High‐throughput flow cytometry data normalization for clinical trials Dahkki Greg Finak, Wenxin Jiang, Kevin Krouse, Chungwen Wei, Igñacio Sanz, Deborah Phippard, Adam L. Asare, Stephen C. De Rosa, Steve Self, Raphaël Gottardo

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The Impact of Normalization Methods on RNA-Seq Data Analysis Dahkki Joanna Zyprych-Walczak, Alicja Szabelska‐Beręsewicz, Luiza Handschuh, Katarzyna Górczak, Kamila Klamecka, Marek Figlerowicz, Idzi Siatkowski

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Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes Dahkki Jo Vandesompele, Katleen De Preter, Filip Pattyn, Bruce Poppe, Nadine Van Roy, Anne De Paepe, Frank Speleman

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A systematic study of normalization methods for Infinium 450K methylation data using whole-genome bisulfite sequencing data Dahkki Ting Wang, Weihua Guan, Jerome Lin, Nadia Boutaoui, Glorisa Canino, Jianhua Luo, Juan C. Celedón, Wei Chen

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Microarray Meta-Analysis and Cross-Platform Normalization: Integrative Genomics for Robust Biomarker Discovery Dahkki Christopher J. Walsh, Pingzhao Hu, Jane Batt, Claúdia C. dos Santos

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Identifying Relationships between Physiological Measures and Evaluation Metrics for 3D Interaction Techniques Dahkki Rafael Rieder, Christian Haag Kristensen, Márcio Sarroglia Pinho

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How data analysis affects power, reproducibility and biological insight of RNA-seq studies in complex datasets Dahkki Lucı́a Peixoto, Davide Risso, Shane G. Poplawski, Mathieu E. Wimmer, Terence P. Speed, Marcelo A. Wood, Ted Abel

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A Reference-Free Algorithm for Computational Normalization of Shotgun Sequencing Data Dahkki C. Titus Brown, Adina Howe, Qingpeng Zhang, Alexis Black Pyrkosz, Timothy H. Brom

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The effects of normalization on the correlation structure of microarray data Dahkki Xing Qiu, Andrew I. Brooks, Lev B. Klebanov, Andrei Yakovlev

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Identification of Suitable Reference Genes for Gene Expression Studies of Shoulder Instability Dahkki Mariana Ferreira Leal, Paulo Santoro Belangero, Carina Cohen, Eduardo Antônio de Figueiredo, Leonor Casilla Loyola, Alberto Castro Pochini, Marı́lia de Arruda Cardoso Smith, Carlos Vicente Andreoli, Síntia Belangero, Benno Ejnisman, Moisés Cohen

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Robust RT-qPCR Data Normalization: Validation and Selection of Internal Reference Genes during Post-Experimental Data Analysis Dahkki Daijun Ling, Paul M. Salvaterra

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Evaluation of New Reference Genes in Papaya for Accurate Transcript Normalization under Different Experimental Conditions Dahkki Xiaoyang Zhu, Xueping Li, Weixin Chen, Jianye Chen, Wang‐jin Lu, Lei Chen, Danwen Fu

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Evaluation of Normalization Methods to Pave the Way Towards Large-Scale LC-MS-Based Metabolomics Profiling Experiments Dahkki Bedilu Alamirie Ejigu, Dirk Valkenborg, Geert Baggerman, Manu Vanaerschot, Erwin Witters, Jean‐Claude Dujardin, Tomasz Burzykowski, Maya Berg

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MetaboAnalyst: a web server for metabolomic data analysis and interpretation Dahkki Jianguo Xia, Nikolaos Psychogios, N. Young, David S. Wishart

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NormaCurve: A SuperCurve-Based Method That Simultaneously Quantifies and Normalizes Reverse Phase Protein Array Data Dahkki Sylvie Troncale, Aurélie Barbet, Lamine Coulibaly, Émilie Henry, Beilei He, Emmanuel Barillot, Thierry Dubois, Philippe Hupé, Leanne de Koning

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ArrayPipe: a flexible processing pipeline for microarray data Dahkki Karsten Hokamp, Fiona Roche, M. Acab, Marc-Étienne Rousseau, Braden Kuo, David L. Goode, D.P. Aeschliman, Jennifer Bryan, Lorne A. Babiuk, Robert E. W. Hancock, Fiona S. L. Brinkman

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Affinity purification–mass spectrometry and network analysis to understand protein-protein interactions Dahkki John H. Morris, Giselle M. Knudsen, Erik Verschueren, Jeffrey R. Johnson, Peter Cimermančič, Alexander L. Greninger, Alexander R. Pico

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Subset Quantile Normalization Using Negative Control Features Dahkki Zhijin Wu, Martin J. Aryee

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Rank Ordering Plate Data Facilitates Data Visualization and Normalization in High-Throughput Screening Dahkki Chand S. Mangat, Amrita Bharat, Sebastian S. Gehrke, Eric D. Brown

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