SURGE: uncovering context-specific genetic-regulation of gene expression from single-cell RNA sequencing using latent-factor models

Abstract Genetic regulation of gene expression is a complex process, with genetic effects known to vary across cellular contexts such as cell types and environmental conditions. We developed SURGE, a method for unsupervised discovery of context-specific expression quantitative trait loci (eQTLs) fro...

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Main Authors: Benjamin J. Strober, Karl Tayeb, Joshua M Popp, Guanghao Qi, M. Grace Gordon, Richard K. Perez, Chun Ye, Alexis Battle
格式: Artigo
语言:英语
出版: 2024
在线阅读:https://doi.org/10.1186/s13059-023-03152-z
https://genomebiology.biomedcentral.com/counter/pdf/10.1186/s13059-023-03152-z
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