CIDANE: comprehensive isoform discovery and abundance estimation
We present CIDANE, a novel framework for genome-based transcript reconstruction and quantification from RNA-seq reads. CIDANE assembles transcripts efficiently with significantly higher sensitivity and precision than existing tools. Its algorithmic core not only reconstructs transcripts ab initio, b...
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| Main Authors: | , , , , |
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| 格式: | Artigo |
| 语言: | 英语 |
| 出版: |
2016
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| 在线阅读: | https://doi.org/10.1186/s13059-015-0865-0 https://genomebiology.biomedcentral.com/track/pdf/10.1186/s13059-015-0865-0 |
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