CIDANE: comprehensive isoform discovery and abundance estimation
We present CIDANE, a novel framework for genome-based transcript reconstruction and quantification from RNA-seq reads. CIDANE assembles transcripts efficiently with significantly higher sensitivity and precision than existing tools. Its algorithmic core not only reconstructs transcripts ab initio, b...
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| Autores principales: | , , , , |
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| Formato: | Artigo |
| Lenguaje: | inglés |
| Publicado: |
2016
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| Acceso en línea: | https://doi.org/10.1186/s13059-015-0865-0 https://genomebiology.biomedcentral.com/track/pdf/10.1186/s13059-015-0865-0 |
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