Resultats de la cerca - Yi-Chieh Wu

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  1. 1
    TreeFix: Statistically Informed Gene Tree Error Correction Using Species Trees

    TreeFix: Statistically Informed Gene Tree Error Correction Using Species Trees per Yi-Chieh Wu, Matthew D. Rasmussen, Mukul S. Bansal, Manolis Kellis

    Publicat 2012
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  2. 2
    Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees

    Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees per Yi-Chieh Wu, Matthew D. Rasmussen, Mukul S. Bansal, Manolis Kellis

    Publicat 2013
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  3. 3
    Pareto-optimal phylogenetic tree reconciliation

    Pareto-optimal phylogenetic tree reconciliation per Ran Libeskind-Hadas, Yi-Chieh Wu, Mukul S. Bansal, Manolis Kellis

    Publicat 2014
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  4. 4
    Improved gene tree error correction in the presence of horizontal gene transfer

    Improved gene tree error correction in the presence of horizontal gene transfer per Mukul S. Bansal, Yi-Chieh Wu, Eric J. Alm, Manolis Kellis

    Publicat 2014
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  5. 5
    Highly Conserved Residues in the Helical Domain of Dengue Virus Type 1 Precursor Membrane Protein Are Involved in Assembly, Precursor Membrane (prM) Protein Cleavage, and Entry

    Highly Conserved Residues in the Helical Domain of Dengue Virus Type 1 Precursor Membrane Protein Are Involved in Assembly, Precursor Membrane (prM) Protein Cleavage, and Entry per Szu-Chia Hsieh, Yi-Chieh Wu, Gang Zou, Vivek R. Nerurkar, Pei‐Yong Shi, Wei‐Kung Wang

    Publicat 2014
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  6. 6
    Analysis of Cross-Reactive Antibodies Recognizing the Fusion Loop of Envelope Protein and Correlation with Neutralizing Antibody Titers in Nicaraguan Dengue Cases

    Analysis of Cross-Reactive Antibodies Recognizing the Fusion Loop of Envelope Protein and Correlation with Neutralizing Antibody Titers in Nicaraguan Dengue Cases per Chih-Yun Lai, Katherine L. Williams, Yi-Chieh Wu, Sarah Knight, Ángel Balmaseda, Eva Harris, Wei‐Kung Wang

    Publicat 2013
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  7. 7
    eMPRess: a systematic cophylogeny reconciliation tool

    eMPRess: a systematic cophylogeny reconciliation tool per Santi Santichaivekin, Qing Yang, Jingyi Liu, Ross Mawhorter, Justin Jiang, Trenton Wesley, Yi-Chieh Wu, Ran Libeskind-Hadas

    Publicat 2020
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  8. 8
    High-Avidity and Potently Neutralizing Cross-Reactive Human Monoclonal Antibodies Derived from Secondary Dengue Virus Infection

    High-Avidity and Potently Neutralizing Cross-Reactive Human Monoclonal Antibodies Derived from Secondary Dengue Virus Infection per Wen-Yang Tsai, Chih-Yun Lai, Yi-Chieh Wu, Hong-En Lin, Carolyn Edwards, Amonrat Jumnainsong, Srisakul Kliks, Scott B. Halstead, Juthathip Mongkolsapaya, Gavin Screaton, Wei‐Kung Wang

    Publicat 2013
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  9. 9
    Analysis of Epitopes on Dengue Virus Envelope Protein Recognized by Monoclonal Antibodies and Polyclonal Human Sera by a High Throughput Assay

    Analysis of Epitopes on Dengue Virus Envelope Protein Recognized by Monoclonal Antibodies and Polyclonal Human Sera by a High Throughput Assay per Hong-En Lin, Wen-Yang Tsai, I-Ju Liu, Pi‐Chun Li, Mei‐Ying Liao, Jih‐Jin Tsai, Yi-Chieh Wu, Chih-Yun Lai, Chih‐Hsuan Lu, Jyh-Hsiung Huang, Gwong‐Jen J. Chang, Han‐Chung Wu, Wei‐Kung Wang

    Publicat 2012
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  10. 10
    Extensive introgression in a malaria vector species complex revealed by phylogenomics

    Extensive introgression in a malaria vector species complex revealed by phylogenomics per Michaël C. Fontaine, James B. Pease, Aaron Steele, Robert M. Waterhouse, Daniel E. Neafsey, Igor V. Sharakhov, Xiaofang Jiang, A. Brantley Hall, Flaminia Catteruccia, Evdoxia G. Kakani, Sara N. Mitchell, Yi-Chieh Wu, Hilary A. Smith, R. Rebecca Love, Mara Lawniczak, Michel A Slotman, Scott Emrich, Matthew W. Hahn, Nora J. Besansky

    Publicat 2014
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  11. 11
    Comparative analysis of regulatory information and circuits across distant species

    Comparative analysis of regulatory information and circuits across distant species per Alan P. Boyle, Carlos L. Araya, Cathleen Brdlik, Philip Cayting, Chao Cheng, Yong Cheng, Kathryn E. Gardner, LaDeana Hillier, J. Janette, Lixia Jiang, Dionna M. Kasper, Trupti Kawli, Pouya Kheradpour, Anshul Kundaje, Jingyi Jessica Li, Lijia Ma, Wei Niu, E. Jay Rehm, Joel Rozowsky, Matthew Slattery, Rebecca Spokony, Robert Terrell, Dionne Vafeados, Daifeng Wang, Peter Weisdepp, Yi-Chieh Wu, Dan Xie, Koon-Kiu Yan, Elise A. Feingold, Peter J. Good, Michael J. Pazin, Haiyan Huang, Peter J. Bickel, Steven E. Brenner, V Reinke, R Waterston, Mark Gerstein, Kevin P. White, Manolis Kellis, M Snyder

    Publicat 2014
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  12. 12
    A comparative encyclopedia of DNA elements in the mouse genome

    A comparative encyclopedia of DNA elements in the mouse genome per Feng Yue, Yong Cheng, Alessandra Breschi, Jeff Vierstra, Wei-Sheng Wu, Tyrone Ryba, Richard Sandstrom, Zhihai Ma, Carrie Davis, Benjamin D. Pope, Yin Shen, Dmitri D. Pervouchine, Sarah Djebali, Robert E. Thurman, Rajinder Kaul, Eric Rynes, Anthony Kirilusha, Georgi K. Marinov, Brian A. Williams, Diane Trout, Henry Amrhein, Katherine Fisher-Aylor, Igor Antoshechkin, Gilberto DeSalvo, Lei-Hoon See, Meagan Fastuca, Jörg Drenkow, Chris Zaleski, Alexander Dobin, Pablo Prieto, Julien Lagarde, Giovanni Bussotti, Andrea Tanzer, Olgert Denas, Kanwei Li, M. A. Bender, Miaohua Zhang, Rachel Byron, Mark Groudine, David McCleary, Long Pham, Zhen Ye, Samantha Kuan, Lee Edsall, Yi-Chieh Wu, Matthew D. Rasmussen, Mukul S. Bansal, Manolis Kellis, Cheryl A. Keller, Christapher S. Morrissey, Tejaswini Mishra, Deepti Jain, Nergiz Doğan, Robert S. Harris, Philip Cayting, Trupti Kawli, Alan P. Boyle, Ghia Euskirchen, Anshul Kundaje, Shin Lin, Yiing Lin, Camden Jansen, Venkat S. Malladi, Melissa Cline, Drew T. Erickson, Vanessa M. Kirkup, Katrina Learned, Cricket A. Sloan, Kate R. Rosenbloom, Beatriz Lacerda de Sousa, Kathryn Beal, Miguel Pignatelli, Paul Flicek, Lian Jin, Tamer Kahveci, Dongwon Lee, W. James Kent, Miguel Ramalho Santos, Javier Herrero, Cédric Notredame, Audra Johnson, Shinny Vong, Kristen Lee, Daniel Bates, Fidencio Neri, Morgan Diegel, Theresa K. Canfield, Peter J. Sabo, Matthew S. Wilken, Thomas A. Reh, Erika Giste, Anthony Shafer, Tanya Kutyavin, Eric Haugen, Douglas Dunn, Alex Reynolds, Shane Neph, Richard Humbert, R. Scott Hansen, Marella de Bruijn

    Publicat 2014
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  13. 13
    Integrative analysis of 111 reference human epigenomes

    Integrative analysis of 111 reference human epigenomes per Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi‐Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J. Ziller, Viren Amin, John W. Whitaker, Matthew D. Schultz, Lucas D. Ward, Abhishek Sarkar, Gerald Quon, Richard Sandstrom, Matthew L. Eaton, Yi-Chieh Wu, Andreas R. Pfenning, Xinchen Wang, Melina Claussnitzer, Yaping Liu, Cristian Coarfa, R. Alan Harris, Noam Shoresh, Charles B. Epstein, Elizabeta Gjoneska, Danny Leung, Wei Xie, R. David Hawkins, Ryan Lister, Chibo Hong, Philippe Gascard, Andrew J. Mungall, Richard A. Moore, Eric Chuah, Angela Tam, Theresa K. Canfield, R. Scott Hansen, Rajinder Kaul, Peter J. Sabo, Mukul S. Bansal, Annaïck Carles, Jesse R. Dixon, Kai-How Farh, Soheil Feizi, Rosa Karlić, Ah-Ram Kim, Ashwinikumar Kulkarni, Daofeng Li, Rebecca F. Lowdon, GiNell Elliott, Tim R. Mercer, Shane Neph, Vitor Onuchic, Paz Polak, Nisha Rajagopal, Pradipta Ray, Richard Sallari, Kyle Siebenthall, Nicholas A. Sinnott‐Armstrong, Michael Stevens, Robert E. Thurman, Jie Wu, Bo Zhang, Xin Zhou, Arthur E. Beaudet, Laurie A. Boyer, Philip L. De Jager, Peggy Farnham, Susan J. Fisher, David Haussler, Steven J.M. Jones, Wei Li, Marco A. Marra, Michael T. McManus, Shamil Sunyaev, James A. Thomson, Thea D. Tlsty, Linus Tsai, Wei Wang, Robert A. Waterland, Michael Q. Zhang, Lisa H. Chadwick, B Bernstein, J Costello, Joseph R. Ecker, Martin Hirst, Alexander Meissner, Aleksandar Milosavljević, Bing Ren, J Stamatoyannopoulos, Ting Wang, Manolis Kellis

    Publicat 2015
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  14. 14
    Highly evolvable malaria vectors: The genomes of 16 <i>Anopheles</i> mosquitoes

    Highly evolvable malaria vectors: The genomes of 16 <i>Anopheles</i> mosquitoes per Daniel E. Neafsey, Robert M. Waterhouse, Mohammad Reza Abai, Sergey Aganezov, Max A. Alekseyev, James E. Allen, James Amon, Bruno Arcà, Peter Arensburger, Gleb N. Artemov, Lauren A. Assour, Hamidreza Basseri, Aaron Berlin, Bruce W. Birren, Stéphanie Blandin, Andrew I. Brockman, Thomas R. Burkot, Austin Burt, Clara S. Chan, Cédric Chauve, Joanna C. Chiu, Mikkel Christensen, Carlo Costantini, Victoria L M Davidson, Elena Deligianni, Tania Dottorini, Vicky Dritsou, Stacey B. Gabriel, Wamdaogo M. Guelbéogo, A. Brantley Hall, Mira V. Han, Thaung Hlaing, Daniel Hughes, Adam M. Jenkins, Xiaofang Jiang, Irwin Jungreis, Evdoxia G. Kakani, Maryam Kamali, Petri Kemppainen, Ryan Kennedy, Ioannis Kirmitzoglou, Lizette L. Koekemoer, Njoroge Laban, Nicholas Langridge, Mara Lawniczak, Manolis Lirakis, Neil F. Lobo, Ernesto Lowy, Robert M. MacCallum, Chunhong Mao, G. Maslen, Charles Mbogo, Jennifer B. McCarthy, Kristin Michel, Sara N. Mitchell, Wendy Moore, Katherine A. Murphy, Anastasia N. Naumenko, Tony Nolan, Eva Maria Novoa, Samantha M. O’Loughlin, Chioma Oringanje, Mohammad Ali Oshaghi, Nazzy Pakpour, Philippos Aris Papathanos, Ashley Peery, Michael Povelones, Anil Prakash, David P. Price, Ashok Rajaraman, Lisa Reimer, David C. Rinker, Antonis Rokas, Tanya L. Russell, N’Falé Sagnon, Maria V. Sharakhova, Terrance Shea, Felipe A. Simão, Frédéric Simard, Michel A. Slotman, Pradya Somboon, V. N. Stegniy, Cláudio J. Struchiner, Gregg W.C. Thomas, Marta Tojo, Pantelis Topalis, José M. C. Tubío, Maria Unger, John Vontas, Catherine Walton, Craig S. Wilding, Judith H. Willis, Yi-Chieh Wu, Guiyun Yan, Evgeny M. Zdobnov, Xiaofan Zhou, Flaminia Catteruccia, George K. Christophides, Frank H. Collins, Robert S. Cornman

    Publicat 2014
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