Search Results - Violeta Beleva‐Guthrie

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  1. 1
    SubClonal Hierarchy Inference from Somatic Mutations: Automatic Reconstruction of Cancer Evolutionary Trees from Multi-region Next Generation Sequencing

    SubClonal Hierarchy Inference from Somatic Mutations: Automatic Reconstruction of Cancer Evolutionary Trees from Multi-region Next Generation Sequencing by Noushin Niknafs, Violeta Beleva‐Guthrie, Daniel Q. Naiman, Rachel Karchin

    Published 2015
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  2. 2
    Evaluation of machine learning methods to predict peptide binding to MHC Class I proteins

    Evaluation of machine learning methods to predict peptide binding to MHC Class I proteins by Rohit Bhattacharya, Ashok Sivakumar, Collin Tokheim, Violeta Beleva Guthrie, Valsamo Anagnostou, Victor E. Velculescu, Rachel Karchin

    Published 2017
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  3. 3
    A Probabilistic Model to Predict Clinical Phenotypic Traits from Genome Sequencing

    A Probabilistic Model to Predict Clinical Phenotypic Traits from Genome Sequencing by Yunching Chen, Christopher Douville, Cheng Wang, Noushin Niknafs, Grace Yeo, Violeta Beleva‐Guthrie, Hannah Carter, Peter D. Stenson, D.N. Cooper, Biao Li, Sean D. Mooney, Rachel Karchin

    Published 2014
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  4. 4
    Prognostic implication of methylation-based circulating tumor DNA detection prior to surgery in stage I non-small cell lung cancer

    Prognostic implication of methylation-based circulating tumor DNA detection prior to surgery in stage I non-small cell lung cancer by Yohan Bossé, Abhijit Dasgupta, Michael Abadier, Violeta Beleva Guthrie, Florian Song, Victoria Saavedra Armero, Nathalie Gaudreault, Michèle Orain, Fabien C. Lamaze, Collin Melton, Tracy Nance, Tiffany Hung, Darren Hodgson, Chris Abbosh, Philippe Joubert

    Published 2024
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  5. 5
    Genomic alterations in head and neck squamous cell carcinoma determined by cancer gene-targeted sequencing

    Genomic alterations in head and neck squamous cell carcinoma determined by cancer gene-targeted sequencing by Christine H. Chung, Violeta Beleva Guthrie, David L. Masica, Collin Tokheim, Hyunseok Kang, Jeremy D. Richmon, Nishant Agrawal, Carole Fakhry, Harry Quon, Rathan M. Subramaniam, Zhixiang Zuo, T. Seiwert, Zachary R. Chalmers, Garrett M. Frampton, Siraj M. Ali, Roman Yelensky, Philip J. Stephens, V.A. Miller, Rachel Karchin, Justin A. Bishop

    Published 2015
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  6. 6
    Single‐cell sequencing defines genetic heterogeneity in pancreatic cancer precursor lesions

    Single‐cell sequencing defines genetic heterogeneity in pancreatic cancer precursor lesions by Yuko Kuboki, Catherine G. Fischer, Violeta Beleva Guthrie, Wenjie Huang, Jun Yu, Peter Chianchiano, Waki Hosoda, Hao Zhang, Lily Zheng, Xiaoshan M. Shao, Elizabeth D. Thompson, Kevin Waters, Justin Poling, Jin He, Matthew J. Weiss, Christopher L. Wolfgang, Michael Goggins, Ralph H. Hruban, Nicholas J. Roberts, Rachel Karchin, Laura D. Wood

    Published 2018
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  7. 7
    Intraductal Papillary Mucinous Neoplasms Arise From Multiple Independent Clones, Each With Distinct Mutations

    Intraductal Papillary Mucinous Neoplasms Arise From Multiple Independent Clones, Each With Distinct Mutations by Catherine G. Fischer, Violeta Beleva Guthrie, Alicia M. Braxton, Lily Zheng, Pei Wang, Qianqian Song, James F. Griffin, Peter Chianchiano, Waki Hosoda, Noushin Niknafs, Simeon Springer, Marco Dal Molin, David L. Masica, Robert B. Scharpf, Elizabeth D. Thompson, Jin He, Christopher L. Wolfgang, Ralph H. Hruban, Nicholas J. Roberts, Anne Marie Lennon, Yuchen Jiao, Rachel Karchin, Laura D. Wood

    Published 2019
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  8. 8
    Evolution of Neoantigen Landscape during Immune Checkpoint Blockade in Non–Small Cell Lung Cancer

    Evolution of Neoantigen Landscape during Immune Checkpoint Blockade in Non–Small Cell Lung Cancer by Valsamo Anagnostou, Kellie N. Smith, Patrick M. Forde, Noushin Niknafs, Rohit Bhattacharya, James R. White, Theresa Zhang, Vilmos Adleff, Jillian Phallen, Neha Wali, Carolyn Hruban, Violeta Beleva Guthrie, Kristen Rodgers, Jarushka Naidoo, Hyunseok Kang, William H. Sharfman, Christos Georgiades, Franco Verde, Peter B. Illei, Qing Kay Li, Edward Gabrielson, Malcolm V. Brock, Cynthia A. Zahnow, Stephen B. Baylin, Robert B. Scharpf, Julie R. Brahmer, Rachel Karchin, Drew M. Pardoll, Victor E. Velculescu

    Published 2016
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  9. 9
    Multiregion whole-exome sequencing of intraductal papillary mucinous neoplasms reveals frequent somatic <i>KLF4</i> mutations predominantly in low-grade regions

    Multiregion whole-exome sequencing of intraductal papillary mucinous neoplasms reveals frequent somatic <i>KLF4</i> mutations predominantly in low-grade regions by Kohei Fujikura, Waki Hosoda, Matthäus Felsenstein, Qianqian Song, Johannes G. Reiter, Lily Zheng, Violeta Beleva Guthrie, Natalia Rincon, Marco Dal Molin, Jonathan C. Dudley, Joshua D. Cohen, Pei Wang, Catherine G. Fischer, Alicia M. Braxton, Michaël Noë, Martine Jongepier, Carlos Fernández-del Castillo, Mari Mino‐Kenudson, C. Max Schmidt, Michele Yip-Schneider, Rita T. Lawlor, Roberto Salvia, Nicholas J. Roberts, Elizabeth D. Thompson, Rachel Karchin, Anne Marie Lennon, Yuchen Jiao, Laura D. Wood

    Published 2020
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  10. 10
    Exome sequencing identifies frequent inactivating mutations in BAP1, ARID1A and PBRM1 in intrahepatic cholangiocarcinomas

    Exome sequencing identifies frequent inactivating mutations in BAP1, ARID1A and PBRM1 in intrahepatic cholangiocarcinomas by Yuchen Jiao, Timothy M. Pawlik, Robert A. Anders, Florin M. Selaru, Mirte Mayke Streppel, Donald J. Lucas, Noushin Niknafs, Violeta Beleva Guthrie, Anirban Maitra, Pedram Argani, G. Johan A. Offerhaus, Juan Carlos Roa, Lewis R. Roberts, Gregory J. Gores, Irinel Popescu, Sorin Alexandrescu, Simona Dima, Matteo Fassan, Michele Simbolo, Andrea Mafficini, Paola Capelli, Rita T. Lawlor, Andrea Ruzzenente, Alfredo Guglielmi, Giampaolo Tortora, Filippo de Braud, Aldo Scarpa, William R. Jarnagin, David S. Klimstra, Rachel Karchin, Victor E. Velculescu, Ralph H. Hruban, Bert Vogelstein, Kenneth W. Kinzler, Nickolas Papadopoulos, Laura D. Wood

    Published 2013
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  11. 11
    Genomic characterization of malignant progression in neoplastic pancreatic cysts

    Genomic characterization of malignant progression in neoplastic pancreatic cysts by Michaël Noë, Noushin Niknafs, Catherine G. Fischer, Wenzel M. Hackeng, Violeta Beleva Guthrie, Waki Hosoda, Marija Debeljak, Eniko Papp, Vilmos Adleff, James R. White, Claudio Luchini, Antonio Pea, Aldo Scarpa, Giovanni Butturini, Giuseppe Zamboni, M. Paola Castelli, Seung‐Mo Hong, Shinichi Yachida, Nobuyoshi Hiraoka, Anthony J. Gill, Jaswinder S. Samra, G. Johan A. Offerhaus, Anne Hoorens, Joanne Verheij, Casper Jansen, Volkan Adsay, Wei Jiang, Jordan M. Winter, Jorge Albores‐Saavedra, Benoît Terris, Elizabeth D. Thompson, Nicholas J. Roberts, Ralph H. Hruban, Rachel Karchin, Robert B. Scharpf, Lodewijk A.A. Brosens, Victor E. Velculescu, Laura D. Wood

    Published 2020
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