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1

Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae od Timothy D. Read

Wydane 2003

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2

Characterizing the genetic basis of bacterial phenotypes using genome-wide association studies: a new direction for bacteriology od Timothy D. Read, Ruth C. Massey

Wydane 2014

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3

Staphylococcus aureus viewed from the perspective of 40,000+ genomes od Robert A. Petit, Timothy D. Read

Wydane 2018

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Artigo

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4

Bactopia: a Flexible Pipeline for Complete Analysis of Bacterial Genomes od Robert A. Petit, Timothy D. Read

Wydane 2020

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Artigo

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5

Scaffolding and validation of bacterial genome assemblies using optical restriction maps od Niranjan Nagarajan, Timothy D. Read, Mihai Pop

Wydane 2008

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Artigo

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6

Genome-Based Prediction of Bacterial Antibiotic Resistance od Michelle Su, Sarah W. Satola, Timothy D. Read

Wydane 2018

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Revisão

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7

DIYA: a bacterial annotation pipeline for any genomics lab od Andrew C. Stewart, Brian I. Osborne, Timothy D. Read

Wydane 2009

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Artigo

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8

Incomplete immunity in a natural animal-microbiota interaction selects for higher pathogen virulence od Kim L. Hoang, Timothy D. Read, Kayla C. King

Wydane 2024

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Artigo

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9

The role of hypermutation and collateral sensitivity in antimicrobial resistance diversity of Pseudomonas aeruginosa populations in cystic fibrosis lung infection od Jelly Vanderwoude, Sheyda Azimi, Timothy D. Read, Stephen P. Diggle

Wydane 2024

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Artigo

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10

Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample od Chengwei Luo, Despina Tsementzi, Nikos C. Kyrpides, Timothy D. Read, Konstantinos T. Konstantinidis

Wydane 2012

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Artigo

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11

A Mutation in the PP2C Phosphatase Gene in a Staphylococcus aureus USA300 Clinical Isolate with Reduced Susceptibility to Vancomycin and Daptomycin od Karla D. Passalacqua, Sarah W. Satola, Emily K. Crispell, Timothy D. Read

Wydane 2012

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Artigo

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12

Interplay of recombination and selection in the genomes of Chlamydia trachomatis od Sandeep J. Joseph, Xavier Didelot, Khanjan Gandhi, Deborah Dean, Timothy D. Read

Wydane 2011

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Artigo

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13

Comparative Analysis of Chlamydia psittaci Genomes Reveals the Recent Emergence of a Pathogenic Lineage with a Broad Host Range od Timothy D. Read, Sandeep J. Joseph, Xavier Didelot, Brooke Liang, Lisa Patel, Deborah Dean

Wydane 2013

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Artigo

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14

Genotypic and Phenotypic Diversity of Staphylococcus aureus Isolates from Cystic Fibrosis Patient Lung Infections and Their Interactions with Pseudomonas aeruginosa od Eryn E. Bernardy, Robert A. Petit, Vishnu Raghuram, Ashley M. Alexander, Timothy D. Read, Joanna B. Goldberg

Wydane 2020

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Artigo

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15

Species-Wide Phylogenomics of the Staphylococcus aureus Agr Operon Revealed Convergent Evolution of Frameshift Mutations od Vishnu Raghuram, Ashley M. Alexander, Hui Qi Loo, Robert A. Petit, Joanna B. Goldberg, Timothy D. Read

Wydane 2022

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Artigo

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16

Population Genomics of Chlamydia trachomatis: Insights on Drift, Selection, Recombination, and Population Structure od Sandeep J. Joseph, Xavier Didelot, James Rothschild, Henry J.C. de Vries, Servaas A. Morré, Timothy D. Read, Deborah Dean

Wydane 2012

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Artigo

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17

Transmission and Microevolution of USA300 MRSA in U.S. Households: Evidence from Whole-Genome Sequencing od Tauqeer Alam, Timothy D. Read, Robert A. Petit, Susan Boyle‐Vavra, Loren G. Miller, Samantha J. Eells, Robert S. Daum, Michael David

Wydane 2015

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Artigo

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18

Protocol for the Emory University African American Vaginal, Oral, and Gut Microbiome in Pregnancy Cohort Study od Elizabeth J. Corwin, Carol J. Hogue, Bradley D. Pearce, Cherie C. Hill, Timothy D. Read, Jennifer G. Mullé, Anne L. Dunlop

Wydane 2017

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Artigo

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19

Hypervirulent Chlamydia trachomatis Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L 2 ) and D Lineages od Naraporn Somboonna, Raymond Wan, David M. Ojcius, Matthew A. Pettengill, Sandeep J. Joseph, Alexander Chang, Ray T. Hsu, Timothy D. Read, Deborah Dean

Wydane 2011

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Artigo

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20

IsdB-dependent Hemoglobin Binding Is Required for Acquisition of Heme by Staphylococcus aureus od Gleb Pishchany, Jessica R. Sheldon, Claire F. Dickson, Md Tauqeer Alam, Timothy D. Read, David A. Gell, David E. Heinrichs, Eric P. Skaar

Wydane 2013

Dokumenty pełnotekstowe Dokumenty pełnotekstowe
Artigo

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Zapisane w:

Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae od Timothy D. Read

Characterizing the genetic basis of bacterial phenotypes using genome-wide association studies: a new direction for bacteriology od Timothy D. Read, Ruth C. Massey

<i>Staphylococcus aureus</i> viewed from the perspective of 40,000+ genomes od Robert A. Petit, Timothy D. Read

Bactopia: a Flexible Pipeline for Complete Analysis of Bacterial Genomes od Robert A. Petit, Timothy D. Read

Scaffolding and validation of bacterial genome assemblies using optical restriction maps od Niranjan Nagarajan, Timothy D. Read, Mihai Pop

Genome-Based Prediction of Bacterial Antibiotic Resistance od Michelle Su, Sarah W. Satola, Timothy D. Read

DIYA: a bacterial annotation pipeline for any genomics lab od Andrew C. Stewart, Brian I. Osborne, Timothy D. Read

Incomplete immunity in a natural animal-microbiota interaction selects for higher pathogen virulence od Kim L. Hoang, Timothy D. Read, Kayla C. King

The role of hypermutation and collateral sensitivity in antimicrobial resistance diversity of <i>Pseudomonas aeruginosa</i> populations in cystic fibrosis lung infection od Jelly Vanderwoude, Sheyda Azimi, Timothy D. Read, Stephen P. Diggle

Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample od Chengwei Luo, Despina Tsementzi, Nikos C. Kyrpides, Timothy D. Read, Konstantinos T. Konstantinidis

A Mutation in the PP2C Phosphatase Gene in a Staphylococcus aureus USA300 Clinical Isolate with Reduced Susceptibility to Vancomycin and Daptomycin od Karla D. Passalacqua, Sarah W. Satola, Emily K. Crispell, Timothy D. Read

Interplay of recombination and selection in the genomes of Chlamydia trachomatis od Sandeep J. Joseph, Xavier Didelot, Khanjan Gandhi, Deborah Dean, Timothy D. Read

Comparative Analysis of Chlamydia psittaci Genomes Reveals the Recent Emergence of a Pathogenic Lineage with a Broad Host Range od Timothy D. Read, Sandeep J. Joseph, Xavier Didelot, Brooke Liang, Lisa Patel, Deborah Dean

Genotypic and Phenotypic Diversity of Staphylococcus aureus Isolates from Cystic Fibrosis Patient Lung Infections and Their Interactions with Pseudomonas aeruginosa od Eryn E. Bernardy, Robert A. Petit, Vishnu Raghuram, Ashley M. Alexander, Timothy D. Read, Joanna B. Goldberg

Species-Wide Phylogenomics of the Staphylococcus aureus <i>Agr</i> Operon Revealed Convergent Evolution of Frameshift Mutations od Vishnu Raghuram, Ashley M. Alexander, Hui Qi Loo, Robert A. Petit, Joanna B. Goldberg, Timothy D. Read

Population Genomics of Chlamydia trachomatis: Insights on Drift, Selection, Recombination, and Population Structure od Sandeep J. Joseph, Xavier Didelot, James Rothschild, Henry J.C. de Vries, Servaas A. Morré, Timothy D. Read, Deborah Dean

Transmission and Microevolution of USA300 MRSA in U.S. Households: Evidence from Whole-Genome Sequencing od Tauqeer Alam, Timothy D. Read, Robert A. Petit, Susan Boyle‐Vavra, Loren G. Miller, Samantha J. Eells, Robert S. Daum, Michael David

Protocol for the Emory University African American Vaginal, Oral, and Gut Microbiome in Pregnancy Cohort Study od Elizabeth J. Corwin, Carol J. Hogue, Bradley D. Pearce, Cherie C. Hill, Timothy D. Read, Jennifer G. Mullé, Anne L. Dunlop

Hypervirulent Chlamydia trachomatis Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L <sub>2</sub> ) and D Lineages od Naraporn Somboonna, Raymond Wan, David M. Ojcius, Matthew A. Pettengill, Sandeep J. Joseph, Alexander Chang, Ray T. Hsu, Timothy D. Read, Deborah Dean

IsdB-dependent Hemoglobin Binding Is Required for Acquisition of Heme by Staphylococcus aureus od Gleb Pishchany, Jessica R. Sheldon, Claire F. Dickson, Md Tauqeer Alam, Timothy D. Read, David A. Gell, David E. Heinrichs, Eric P. Skaar

Rezultaty - Timothy D. Read

Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae od Timothy D. Read

Characterizing the genetic basis of bacterial phenotypes using genome-wide association studies: a new direction for bacteriology od Timothy D. Read, Ruth C. Massey

<i>Staphylococcus aureus</i> viewed from the perspective of 40,000+ genomes od Robert A. Petit, Timothy D. Read

Bactopia: a Flexible Pipeline for Complete Analysis of Bacterial Genomes od Robert A. Petit, Timothy D. Read

Scaffolding and validation of bacterial genome assemblies using optical restriction maps od Niranjan Nagarajan, Timothy D. Read, Mihai Pop

Genome-Based Prediction of Bacterial Antibiotic Resistance od Michelle Su, Sarah W. Satola, Timothy D. Read

DIYA: a bacterial annotation pipeline for any genomics lab od Andrew C. Stewart, Brian I. Osborne, Timothy D. Read

Incomplete immunity in a natural animal-microbiota interaction selects for higher pathogen virulence od Kim L. Hoang, Timothy D. Read, Kayla C. King

The role of hypermutation and collateral sensitivity in antimicrobial resistance diversity of <i>Pseudomonas aeruginosa</i> populations in cystic fibrosis lung infection od Jelly Vanderwoude, Sheyda Azimi, Timothy D. Read, Stephen P. Diggle

Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample od Chengwei Luo, Despina Tsementzi, Nikos C. Kyrpides, Timothy D. Read, Konstantinos T. Konstantinidis

A Mutation in the PP2C Phosphatase Gene in a Staphylococcus aureus USA300 Clinical Isolate with Reduced Susceptibility to Vancomycin and Daptomycin od Karla D. Passalacqua, Sarah W. Satola, Emily K. Crispell, Timothy D. Read

Interplay of recombination and selection in the genomes of Chlamydia trachomatis od Sandeep J. Joseph, Xavier Didelot, Khanjan Gandhi, Deborah Dean, Timothy D. Read

Comparative Analysis of Chlamydia psittaci Genomes Reveals the Recent Emergence of a Pathogenic Lineage with a Broad Host Range od Timothy D. Read, Sandeep J. Joseph, Xavier Didelot, Brooke Liang, Lisa Patel, Deborah Dean

Genotypic and Phenotypic Diversity of Staphylococcus aureus Isolates from Cystic Fibrosis Patient Lung Infections and Their Interactions with Pseudomonas aeruginosa od Eryn E. Bernardy, Robert A. Petit, Vishnu Raghuram, Ashley M. Alexander, Timothy D. Read, Joanna B. Goldberg

Species-Wide Phylogenomics of the Staphylococcus aureus <i>Agr</i> Operon Revealed Convergent Evolution of Frameshift Mutations od Vishnu Raghuram, Ashley M. Alexander, Hui Qi Loo, Robert A. Petit, Joanna B. Goldberg, Timothy D. Read

Population Genomics of Chlamydia trachomatis: Insights on Drift, Selection, Recombination, and Population Structure od Sandeep J. Joseph, Xavier Didelot, James Rothschild, Henry J.C. de Vries, Servaas A. Morré, Timothy D. Read, Deborah Dean

Transmission and Microevolution of USA300 MRSA in U.S. Households: Evidence from Whole-Genome Sequencing od Tauqeer Alam, Timothy D. Read, Robert A. Petit, Susan Boyle‐Vavra, Loren G. Miller, Samantha J. Eells, Robert S. Daum, Michael David

Protocol for the Emory University African American Vaginal, Oral, and Gut Microbiome in Pregnancy Cohort Study od Elizabeth J. Corwin, Carol J. Hogue, Bradley D. Pearce, Cherie C. Hill, Timothy D. Read, Jennifer G. Mullé, Anne L. Dunlop

Hypervirulent Chlamydia trachomatis Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L <sub>2</sub> ) and D Lineages od Naraporn Somboonna, Raymond Wan, David M. Ojcius, Matthew A. Pettengill, Sandeep J. Joseph, Alexander Chang, Ray T. Hsu, Timothy D. Read, Deborah Dean

IsdB-dependent Hemoglobin Binding Is Required for Acquisition of Heme by Staphylococcus aureus od Gleb Pishchany, Jessica R. Sheldon, Claire F. Dickson, Md Tauqeer Alam, Timothy D. Read, David A. Gell, David E. Heinrichs, Eric P. Skaar

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