Suchergebnisse - Timothy D. Read

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  1. 1
    Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae

    Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae von Timothy D. Read

    Veröffentlicht 2003
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  2. 2
    Characterizing the genetic basis of bacterial phenotypes using genome-wide association studies: a new direction for bacteriology

    Characterizing the genetic basis of bacterial phenotypes using genome-wide association studies: a new direction for bacteriology von Timothy D. Read, Ruth C. Massey

    Veröffentlicht 2014
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  3. 3
    <i>Staphylococcus aureus</i> viewed from the perspective of 40,000+ genomes

    <i>Staphylococcus aureus</i> viewed from the perspective of 40,000+ genomes von Robert A. Petit, Timothy D. Read

    Veröffentlicht 2018
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  4. 4
    Bactopia: a Flexible Pipeline for Complete Analysis of Bacterial Genomes

    Bactopia: a Flexible Pipeline for Complete Analysis of Bacterial Genomes von Robert A. Petit, Timothy D. Read

    Veröffentlicht 2020
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  5. 5
    Scaffolding and validation of bacterial genome assemblies using optical restriction maps

    Scaffolding and validation of bacterial genome assemblies using optical restriction maps von Niranjan Nagarajan, Timothy D. Read, Mihai Pop

    Veröffentlicht 2008
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  6. 6
    Genome-Based Prediction of Bacterial Antibiotic Resistance

    Genome-Based Prediction of Bacterial Antibiotic Resistance von Michelle Su, Sarah W. Satola, Timothy D. Read

    Veröffentlicht 2018
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  7. 7
    DIYA: a bacterial annotation pipeline for any genomics lab

    DIYA: a bacterial annotation pipeline for any genomics lab von Andrew C. Stewart, Brian I. Osborne, Timothy D. Read

    Veröffentlicht 2009
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  8. 8
    Incomplete immunity in a natural animal-microbiota interaction selects for higher pathogen virulence

    Incomplete immunity in a natural animal-microbiota interaction selects for higher pathogen virulence von Kim L. Hoang, Timothy D. Read, Kayla C. King

    Veröffentlicht 2024
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  9. 9
    The role of hypermutation and collateral sensitivity in antimicrobial resistance diversity of <i>Pseudomonas aeruginosa</i> populations in cystic fibrosis lung infection

    The role of hypermutation and collateral sensitivity in antimicrobial resistance diversity of <i>Pseudomonas aeruginosa</i> populations in cystic fibrosis lung infection von Jelly Vanderwoude, Sheyda Azimi, Timothy D. Read, Stephen P. Diggle

    Veröffentlicht 2024
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  10. 10
    Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample

    Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample von Chengwei Luo, Despina Tsementzi, Nikos C. Kyrpides, Timothy D. Read, Konstantinos T. Konstantinidis

    Veröffentlicht 2012
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  11. 11
    A Mutation in the PP2C Phosphatase Gene in a Staphylococcus aureus USA300 Clinical Isolate with Reduced Susceptibility to Vancomycin and Daptomycin

    A Mutation in the PP2C Phosphatase Gene in a Staphylococcus aureus USA300 Clinical Isolate with Reduced Susceptibility to Vancomycin and Daptomycin von Karla D. Passalacqua, Sarah W. Satola, Emily K. Crispell, Timothy D. Read

    Veröffentlicht 2012
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  12. 12
    Interplay of recombination and selection in the genomes of Chlamydia trachomatis

    Interplay of recombination and selection in the genomes of Chlamydia trachomatis von Sandeep J. Joseph, Xavier Didelot, Khanjan Gandhi, Deborah Dean, Timothy D. Read

    Veröffentlicht 2011
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  13. 13
    Comparative Analysis of Chlamydia psittaci Genomes Reveals the Recent Emergence of a Pathogenic Lineage with a Broad Host Range

    Comparative Analysis of Chlamydia psittaci Genomes Reveals the Recent Emergence of a Pathogenic Lineage with a Broad Host Range von Timothy D. Read, Sandeep J. Joseph, Xavier Didelot, Brooke Liang, Lisa Patel, Deborah Dean

    Veröffentlicht 2013
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  14. 14
    Genotypic and Phenotypic Diversity of Staphylococcus aureus Isolates from Cystic Fibrosis Patient Lung Infections and Their Interactions with Pseudomonas aeruginosa

    Genotypic and Phenotypic Diversity of Staphylococcus aureus Isolates from Cystic Fibrosis Patient Lung Infections and Their Interactions with Pseudomonas aeruginosa von Eryn E. Bernardy, Robert A. Petit, Vishnu Raghuram, Ashley M. Alexander, Timothy D. Read, Joanna B. Goldberg

    Veröffentlicht 2020
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  15. 15
    Species-Wide Phylogenomics of the Staphylococcus aureus <i>Agr</i> Operon Revealed Convergent Evolution of Frameshift Mutations

    Species-Wide Phylogenomics of the Staphylococcus aureus <i>Agr</i> Operon Revealed Convergent Evolution of Frameshift Mutations von Vishnu Raghuram, Ashley M. Alexander, Hui Qi Loo, Robert A. Petit, Joanna B. Goldberg, Timothy D. Read

    Veröffentlicht 2022
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  16. 16
    Population Genomics of Chlamydia trachomatis: Insights on Drift, Selection, Recombination, and Population Structure

    Population Genomics of Chlamydia trachomatis: Insights on Drift, Selection, Recombination, and Population Structure von Sandeep J. Joseph, Xavier Didelot, James Rothschild, Henry J.C. de Vries, Servaas A. Morré, Timothy D. Read, Deborah Dean

    Veröffentlicht 2012
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  17. 17
    Transmission and Microevolution of USA300 MRSA in U.S. Households: Evidence from Whole-Genome Sequencing

    Transmission and Microevolution of USA300 MRSA in U.S. Households: Evidence from Whole-Genome Sequencing von Tauqeer Alam, Timothy D. Read, Robert A. Petit, Susan Boyle‐Vavra, Loren G. Miller, Samantha J. Eells, Robert S. Daum, Michael David

    Veröffentlicht 2015
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  18. 18
    Protocol for the Emory University African American Vaginal, Oral, and Gut Microbiome in Pregnancy Cohort Study

    Protocol for the Emory University African American Vaginal, Oral, and Gut Microbiome in Pregnancy Cohort Study von Elizabeth J. Corwin, Carol J. Hogue, Bradley D. Pearce, Cherie C. Hill, Timothy D. Read, Jennifer G. Mullé, Anne L. Dunlop

    Veröffentlicht 2017
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  19. 19
    Hypervirulent Chlamydia trachomatis Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L <sub>2</sub> ) and D Lineages

    Hypervirulent Chlamydia trachomatis Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L <sub>2</sub> ) and D Lineages von Naraporn Somboonna, Raymond Wan, David M. Ojcius, Matthew A. Pettengill, Sandeep J. Joseph, Alexander Chang, Ray T. Hsu, Timothy D. Read, Deborah Dean

    Veröffentlicht 2011
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  20. 20
    IsdB-dependent Hemoglobin Binding Is Required for Acquisition of Heme by Staphylococcus aureus

    IsdB-dependent Hemoglobin Binding Is Required for Acquisition of Heme by Staphylococcus aureus von Gleb Pishchany, Jessica R. Sheldon, Claire F. Dickson, Md Tauqeer Alam, Timothy D. Read, David A. Gell, David E. Heinrichs, Eric P. Skaar

    Veröffentlicht 2013
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