Resultats de la cerca - Sumit Middha

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  1. 1
    Characterizing genetic variation of adrenergic signalling pathways in Takotsubo (stress) cardiomyopathy exomes

    Characterizing genetic variation of adrenergic signalling pathways in Takotsubo (stress) cardiomyopathy exomes per Adele H. Goodloe, Jared M. Evans, Sumit Middha, Abhiram Prasad, Timothy M. Olson

    Publicat 2014
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  2. 2
    CAP-miRSeq: a comprehensive analysis pipeline for microRNA sequencing data

    CAP-miRSeq: a comprehensive analysis pipeline for microRNA sequencing data per Zhifu Sun, Jared M. Evans, Aditya Bhagwate, Sumit Middha, Matthew A. Bockol, Huihuang Yan, Jean-Pierre Kocher

    Publicat 2014
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  3. 3
    Optimizing Workflows and Processing of Cytologic Samples for Comprehensive Analysis by Next-Generation Sequencing: Memorial Sloan Kettering Cancer Center Experience

    Optimizing Workflows and Processing of Cytologic Samples for Comprehensive Analysis by Next-Generation Sequencing: Memorial Sloan Kettering Cancer Center Experience per Shaozhou K. Tian, Jonathan Keith Killian, Natasha Rekhtman, Ryma Benayed, Sumit Middha, Marc Ladanyi, Oscar Lin, Maria E. Arcila

    Publicat 2016
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  4. 4
    Identification of prognostic molecular biomarkers in 157 HPV‐positive and HPV‐negative squamous cell carcinomas of the oropharynx

    Identification of prognostic molecular biomarkers in 157 HPV‐positive and HPV‐negative squamous cell carcinomas of the oropharynx per Snjezana Doğan, Bin Xu, Sumit Middha, Chad Vanderbilt, Anita S. Bowman, Jocelyn Migliacci, Luc G.T. Morris, Venkatraman Seshan, Ian Ganly

    Publicat 2019
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  5. 5
    Histone Deacetylase Inhibition Promotes Osteoblast Maturation by Altering the Histone H4 Epigenome and Reduces Akt Phosphorylation

    Histone Deacetylase Inhibition Promotes Osteoblast Maturation by Altering the Histone H4 Epigenome and Reduces Akt Phosphorylation per Amel Dudakovic, Jared M. Evans, Ying Li, Sumit Middha, Meghan E. McGee‐Lawrence, André J. van Wijnen, Jennifer J. Westendorf

    Publicat 2013
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  6. 6
    Exome Sequencing and Systems Biology Converge to Identify Novel Mutations in the L-Type Calcium Channel, <i>CACNA1C</i> , Linked to Autosomal Dominant Long QT Syndrome

    Exome Sequencing and Systems Biology Converge to Identify Novel Mutations in the L-Type Calcium Channel, <i>CACNA1C</i> , Linked to Autosomal Dominant Long QT Syndrome per Nicole J. Boczek, Jabe M. Best, David J. Tester, John R. Giudicessi, Sumit Middha, Jared M. Evans, Timothy J. Kamp, Michael J. Ackerman

    Publicat 2013
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  7. 7
    Retained mismatch repair protein expression occurs in approximately 6% of microsatellite instability-high cancers and is associated with missense mutations in mismatch repair genes

    Retained mismatch repair protein expression occurs in approximately 6% of microsatellite instability-high cancers and is associated with missense mutations in mismatch repair genes per Jaclyn F. Hechtman, Satshil Rana, Sumit Middha, Zsofia K. Stadler, Alicia Latham, Ryma Benayed, Robert A. Soslow, Marc Ladanyi, Rona Yaeger, Ahmet Zehir, Jinru Shia

    Publicat 2019
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  8. 8
    SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing

    SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing per Zhifu Sun, Saurabh Baheti, Sumit Middha, Rahul Kanwar, Yuji Zhang, Xing Li, Andreas S. Beutler, Eric W. Klee, Yan W. Asmann, E. Aubrey Thompson, Jean‐Pierre Kocher

    Publicat 2012
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  9. 9
    Novel <i>TRAF1‐ALK</i> fusion identified by deep RNA sequencing of anaplastic large cell lymphoma

    Novel <i>TRAF1‐ALK</i> fusion identified by deep RNA sequencing of anaplastic large cell lymphoma per Andrew L. Feldman, George Vasmatzis, Yan W. Asmann, Jaime Davila, Sumit Middha, Bruce W. Eckloff, Sarah H. Johnson, Julie C. Porcher, Stephen M. Ansell, Ariel J. Caride

    Publicat 2013
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  10. 10
    HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

    HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data per Huihuang Yan, Jared M. Evans, Mike Kalmbach, Raymond M. Moore, Sumit Middha, Stanislav Luban, Liguo Wang, Aditya Bhagwate, Ying Li, Zhifu Sun, Xianfeng Chen, Jean-Pierre A. Kocher

    Publicat 2014
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  11. 11
    The genetic landscape of endometrial clear cell carcinomas

    The genetic landscape of endometrial clear cell carcinomas per Deborah F. DeLair, Kathleen A. Burke, Pier Selenica, Raymond S. Lim, Sasinya N. Scott, Sumit Middha, Abhinita Mohanty, Donavan T. Cheng, Michael F. Berger, Robert A. Soslow, Britta Weigelt

    Publicat 2017
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  12. 12
    Mitochondrial Aging and Physical Decline: Insights From Three Generations of Women

    Mitochondrial Aging and Physical Decline: Insights From Three Generations of Women per Sadie L. Hebert, Perrine Marquet, Ian R. Lanza, Shelly McCrady-Spitzer, James Levine, Sumit Middha, Rickey E. Carter, Katherine A. Klaus, Terry M. Therneau, Edward W. Highsmith, K. Sreekumaran Nair

    Publicat 2015
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  13. 13
    3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer

    3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer per Yan W. Asmann, Eric W. Klee, E. Aubrey Thompson, Edith A. Perez, Sumit Middha, Ann L. Oberg, Terry M. Therneau, Jeremy C. Smith, Gregory A. Poland, Eric D. Wieben, Jean-Pierre Kocher

    Publicat 2009
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  14. 14
    TNNI3K mutation in familial syndrome of conduction system disease, atrial tachyarrhythmia and dilated cardiomyopathy

    TNNI3K mutation in familial syndrome of conduction system disease, atrial tachyarrhythmia and dilated cardiomyopathy per Jeanne L. Theis, Michael T. Zimmermann, Brandon T. Larsen, Inna N. Rybakova, Pamela A. Long, Jared M. Evans, Sumit Middha, Mariza de Andrade, Richard L. Moss, Eric D. Wieben, Virginia V. Michels, Timothy M. Olson

    Publicat 2014
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  15. 15
    Identification of Targetable Kinase Alterations in Patients with Colorectal Carcinoma That are Preferentially Associated with Wild-Type RAS/RAF

    Identification of Targetable Kinase Alterations in Patients with Colorectal Carcinoma That are Preferentially Associated with Wild-Type RAS/RAF per Jaclyn F. Hechtman, Ahmet Zehir, Rona Yaeger, Lu Wang, Sumit Middha, Tao Zheng, David M. Hyman, David B. Solit, Maria E. Arcila, Laetitia Borsu, Jinru Shia, Efsevia Vakiani, Leonard B. Saltz, Marc Ladanyi

    Publicat 2015
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  16. 16
    Novel High-grade Endometrial Stromal Sarcoma

    Novel High-grade Endometrial Stromal Sarcoma per Lien Hoang, Amandeep Aneja, Niamh Conlon, Deborah F. DeLair, Sumit Middha, Ryma Benayed, Martee L. Hensley, Kay J. Park, Travis J. Hollmann, Meera Hameed, Cristina R. Antonescu, Robert A. Soslow, Sarah Chiang

    Publicat 2016
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  17. 17
    New DNA Methylation Markers for Pancreatic Cancer: Discovery, Tissue Validation, and Pilot Testing in Pancreatic Juice

    New DNA Methylation Markers for Pancreatic Cancer: Discovery, Tissue Validation, and Pilot Testing in Pancreatic Juice per John B. Kisiel, Massimo Raimondo, William R. Taylor, Tracy C. Yab, Douglas W. Mahoney, Zhifu Sun, Sumit Middha, Saurabh Baheti, Hongzhi Zou, Thomas C. Smyrk, Lisa A. Boardman, Gloria M. Petersen, David A. Ahlquist

    Publicat 2015
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  18. 18
    TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data

    TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data per Yan W. Asmann, Sumit Middha, Asif Hossain, Saurabh Baheti, Ying Li, High-Seng Chai, Zhifu Sun, Patrick Duffy, Ahmed Hadad, Asha Nair, Xiaoyu Liu, Yuji Zhang, Eric W. Klee, Krishna R. Kalari, Jean‐Pierre Kocher

    Publicat 2011
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  19. 19
    A novel bioinformatics pipeline for identification and characterization of fusion transcripts in breast cancer and normal cell lines

    A novel bioinformatics pipeline for identification and characterization of fusion transcripts in breast cancer and normal cell lines per Yan W. Asmann, Asif Hossain, Brian M. Necela, Sumit Middha, Krishna R. Kalari, Zhifu Sun, High-Seng Chai, David Williamson, Derek C. Radisky, Gary P. Schroth, Jean‐Pierre Kocher, Edith A. Perez, E. Aubrey Thompson

    Publicat 2011
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  20. 20
    Morphological characterization of colorectal cancers in The Cancer Genome Atlas reveals distinct morphology–molecular associations: clinical and biological implications

    Morphological characterization of colorectal cancers in The Cancer Genome Atlas reveals distinct morphology–molecular associations: clinical and biological implications per Jinru Shia, Nikolaus Schultz, Deborah Kuk, Efsevia Vakiani, Sumit Middha, Neil H. Segal, Jaclyn F. Hechtman, Michael F. Berger, Zsofia K. Stadler, Martin R. Weiser, Jedd D. Wolchok, C. Richard Boland, Mithat Gönen, David S. Klimstra

    Publicat 2016
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