Search Results - Matteo Cagiada

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  1. 1
    Predicting absolute protein folding stability using generative models

    Predicting absolute protein folding stability using generative models by Matteo Cagiada, Sergey Ovchinnikov, Kresten Lindorff‐Larsen

    Published 2024
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  2. 2
    Decoding molecular mechanisms for loss of function variants in the human proteome

    Decoding molecular mechanisms for loss of function variants in the human proteome by Matteo Cagiada, Nicolas Jonsson, Kresten Lindorff‐Larsen

    Published 2024
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  3. 3
    Predicting absolute protein folding stability using generative models

    Predicting absolute protein folding stability using generative models by Matteo Cagiada, Sergey Ovchinnikov, Kresten Lindorff‐Larsen

    Published 2024
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  4. 4
    Challenges and compromises: Predicting unbound antibody structures with deep learning

    Challenges and compromises: Predicting unbound antibody structures with deep learning by Alexander Greenshields‐Watson, Odysseas Vavourakis, Fabian C. Spoendlin, Matteo Cagiada, Charlotte M. Deane

    Published 2025
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  5. 5
    AF2χ: Predicting protein side-chain rotamer distributions with AlphaFold2

    AF2χ: Predicting protein side-chain rotamer distributions with AlphaFold2 by Matteo Cagiada, F. Emil Thomasen, Sergey Ovchinnikov, Charlotte M. Deane, Kresten Lindorff‐Larsen

    Published 2025
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  6. 6
    Predicting and interpreting large-scale mutagenesis data using analyses of protein stability and conservation

    Predicting and interpreting large-scale mutagenesis data using analyses of protein stability and conservation by Magnus Haraldson Høie, Matteo Cagiada, Anders Haagen Beck Frederiksen, Amelie Stein, Kresten Lindorff‐Larsen

    Published 2022
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  7. 7
    Discovering functionally important sites in proteins

    Discovering functionally important sites in proteins by Matteo Cagiada, Sandro Bottaro, Søren Lindemose, Signe M. Schenstrøm, Amelie Stein, Rasmus Hartmann‐Petersen, Kresten Lindorff‐Larsen

    Published 2023
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  8. 8
    Characterizing glucokinase variant mechanisms using a multiplexed abundance assay

    Characterizing glucokinase variant mechanisms using a multiplexed abundance assay by Sarah Gersing, Thea K. Schulze, Matteo Cagiada, Amelie Stein, Frederick P. Roth, Kresten Lindorff‐Larsen, Rasmus Hartmann‐Petersen

    Published 2024
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  9. 9
    Rapid protein stability prediction using deep learning representations

    Rapid protein stability prediction using deep learning representations by Lasse M. Blaabjerg, Maher M. Kassem, Lydia L. Good, Nicolas Jonsson, Matteo Cagiada, Kristoffer E. Johansson, Wouter Boomsma, Amelie Stein, Kresten Lindorff‐Larsen

    Published 2023
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  10. 10
    Understanding the Origins of Loss of Protein Function by Analyzing the Effects of Thousands of Variants on Activity and Abundance

    Understanding the Origins of Loss of Protein Function by Analyzing the Effects of Thousands of Variants on Activity and Abundance by Matteo Cagiada, Kristoffer E. Johansson, Audronė Valančiūtė, Sofie V. Nielsen, Rasmus Hartmann‐Petersen, Jun J. Yang, Douglas M. Fowler, Amelie Stein, Kresten Lindorff‐Larsen

    Published 2021
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  11. 11
    Deep mutational scanning reveals a correlation between degradation and toxicity of thousands of aspartoacylase variants

    Deep mutational scanning reveals a correlation between degradation and toxicity of thousands of aspartoacylase variants by Martin Grønbæk-Thygesen, Vasileios Voutsinos, Kristoffer E. Johansson, Thea K. Schulze, Matteo Cagiada, Line Pedersen, Lene Clausen, Snehal Nariya, Rachel Powell, Amelie Stein, Douglas M. Fowler, Kresten Lindorff‐Larsen, Rasmus Hartmann‐Petersen

    Published 2024
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  12. 12
    A mutational atlas for Parkin proteostasis

    A mutational atlas for Parkin proteostasis by Lene Clausen, Vasileios Voutsinos, Matteo Cagiada, Kristoffer E. Johansson, Martin Grønbæk-Thygesen, Snehal Nariya, Rachel Powell, Magnus K. N. Have, Vibe H. Oestergaard, Amelie Stein, Douglas M. Fowler, Kresten Lindorff‐Larsen, Rasmus Hartmann‐Petersen

    Published 2024
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  13. 13
    A comprehensive map of human glucokinase variant activity

    A comprehensive map of human glucokinase variant activity by Sarah Gersing, Matteo Cagiada, Marinella Gebbia, Anette P. Gjesing, Atina G. Coté, Gireesh Seesankar, Roujia Li, Daniel Tabet, Jochen Weile, Amelie Stein, Anna L. Gloyn, Torben Hansen, Frederick P. Roth, Kresten Lindorff‐Larsen, Rasmus Hartmann‐Petersen

    Published 2023
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