Search Results - Marc A. Martı́-Renom

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  1. 1
    Bridging the Resolution Gap in Structural Modeling of 3D Genome Organization

    Bridging the Resolution Gap in Structural Modeling of 3D Genome Organization by Marc A. Martı́-Renom, Leonid A. Mirny

    Published 2011
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  2. 2
    Alignment of protein sequences by their profiles

    Alignment of protein sequences by their profiles by Marc A. Martı́-Renom, M. S. Madhusudhan, Andrej Šali

    Published 2004
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  3. 3
    Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data

    Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data by Job Dekker, Marc A. Martı́-Renom, Leonid A. Mirny

    Published 2013
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  4. 4
    Chromatin globules: a common motif of higher order chromosome structure?

    Chromatin globules: a common motif of higher order chromosome structure? by Amartya Sanyal, Davide Baù, Marc A. Martı́-Renom, Job Dekker

    Published 2011
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  5. 5
    4D nucleome modeling

    4D nucleome modeling by Marco Di Stefano, Jonas Paulsen, Daniel Jost, Marc A. Martı́-Renom

    Published 2020
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  6. 6
    Alignment of multiple protein structures based on sequence and structure features

    Alignment of multiple protein structures based on sequence and structure features by M. S. Madhusudhan, Benjamin Webb, Marc A. Martı́-Renom, Narayanan Eswar, Andrej Šali

    Published 2009
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  7. 7
    Reliability of Assessment of Protein Structure Prediction Methods

    Reliability of Assessment of Protein Structure Prediction Methods by Marc A. Martı́-Renom, M. S. Madhusudhan, András Fiser, Burkhard Rost, Andrej Šali

    Published 2002
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  8. 8
    Polymer modelling unveils the roles of heterochromatin and nucleolar organizing regions in shaping 3D genome organization in<i>Arabidopsis thaliana</i>

    Polymer modelling unveils the roles of heterochromatin and nucleolar organizing regions in shaping 3D genome organization in<i>Arabidopsis thaliana</i> by Marco Di Stefano, Hans‐Wilhelm Nützmann, Marc A. Martı́-Renom, Daniel Jost

    Published 2021
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  9. 9
    <i>N</i>‐glycosylation efficiency is determined by the distance to the C‐terminus and the amino acid preceding an Asn‐Ser‐Thr sequon

    <i>N</i>‐glycosylation efficiency is determined by the distance to the C‐terminus and the amino acid preceding an Asn‐Ser‐Thr sequon by Manuel Bañó‐Polo, Francesca Baldin, Silvia Tamborero, Marc A. Martí‐Renom, Ismael Mingarro

    Published 2010
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  10. 10
    Assessing the limits of restraint-based 3D modeling of genomes and genomic domains

    Assessing the limits of restraint-based 3D modeling of genomes and genomic domains by Marie Trussart, François Serra, Davide Baù, Ivan Junier, Luís Serrano, Marc A. Martı́-Renom

    Published 2015
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  11. 11
    Structure-Based Assessment of Missense Mutations in Human BRCA1

    Structure-Based Assessment of Missense Mutations in Human BRCA1 by Nebojša Mirković, Marc A. Martı́-Renom, Barbara L. Weber, Andrej Šali, Álvaro N.A. Monteiro

    Published 2004
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  12. 12
    Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors

    Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors by François Serra, Davide Baù, Mike Goodstadt, David Castillo, Guillaume J. Filion, Marc A. Martı́-Renom

    Published 2017
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  13. 13
    CHESS enables quantitative comparison of chromatin contact data and automatic feature extraction

    CHESS enables quantitative comparison of chromatin contact data and automatic feature extraction by Silvia Galan, Nick Machnik, Kai Kruse, Noèlia Díaz, Marc A. Martí‐Renom, Juan M. Vaquerizas

    Published 2020
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  14. 14
    A composite score for predicting errors in protein structure models

    A composite score for predicting errors in protein structure models by David Eramian, Min‐Yi Shen, Damien P. Devos, Francisco Melo, Andrej Šali, Marc A. Martı́-Renom

    Published 2006
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  15. 15
    Chromatin and RNA Maps Reveal Regulatory Long Noncoding RNAs in Mouse

    Chromatin and RNA Maps Reveal Regulatory Long Noncoding RNAs in Mouse by Gireesh K. Bogu, Pedro Vizán, Lawrence W. Stanton, Miguel Beato, Luciano Di Croce, Marc A. Martı́-Renom

    Published 2015
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  16. 16
    Transcriptional activation during cell reprogramming correlates with the formation of 3D open chromatin hubs

    Transcriptional activation during cell reprogramming correlates with the formation of 3D open chromatin hubs by Marco Di Stefano, Ralph Stadhouders, Irene Farabella, David Castillo, François Serra, Thomas Graf, Marc A. Martı́-Renom

    Published 2020
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  17. 17
    Coordinated changes in gene expression, H1 variant distribution and genome 3D conformation in response to H1 depletion

    Coordinated changes in gene expression, H1 variant distribution and genome 3D conformation in response to H1 depletion by Núria Serna‐Pujol, Mónica Salinas‐Pena, Francesca Mugianesi, François Le Dily, Marc A. Martí‐Renom, Albert Jordan

    Published 2022
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  18. 18
    Restraint‐based three‐dimensional modeling of genomes and genomic domains

    Restraint‐based three‐dimensional modeling of genomes and genomic domains by François Serra, Marco Di Stefano, Yannick G. Spill, Yasmina Cuartero, Mike Goodstadt, Davide Baù, Marc A. Martı́-Renom

    Published 2015
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  19. 19
    The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules

    The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules by Davide Baù, Amartya Sanyal, Bryan R. Lajoie, Emidio Capriotti, Meg Byron, Jeanne B. Lawrence, Job Dekker, Marc A. Martı́-Renom

    Published 2010
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  20. 20
    EVA: continuous automatic evaluation of protein structure prediction servers

    EVA: continuous automatic evaluation of protein structure prediction servers by Volker A. Eyrich, Marc A. Martı́-Renom, Dariusz Przybylski, M. S. Madhusudhan, András Fiser, Florencio Pazos, Alfonso Valencia, Andrej Šali, Burkhard Rost

    Published 2001
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