Výsledky vyhledávání - Kristian Cibulskis

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  1. 1
    Calling Somatic SNVs and Indels with Mutect2

    Calling Somatic SNVs and Indels with Mutect2 Autor David Benjamin, Takuto Sato, Kristian Cibulskis, Gad Getz, Chip Stewart, Lee Lichtenstein

    Vydáno 2019
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  2. 2
    ContEst: estimating cross-contamination of human samples in next-generation sequencing data

    ContEst: estimating cross-contamination of human samples in next-generation sequencing data Autor Kristian Cibulskis, Aaron McKenna, Tim Fennell, Eric Banks, Mark A. DePristo, Gad Getz

    Vydáno 2011
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  3. 3
    Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples

    Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples Autor Kristian Cibulskis, Michael S. Lawrence, Scott L. Carter, Andrey Sivachenko, David M. Jaffe, Carrie Sougnez, Stacey Gabriel, Matthew Meyerson, Eric S. Lander, Gad Getz

    Vydáno 2013
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  4. 4
    A remarkably simple genome underlies highly malignant pediatric rhabdoid cancers

    A remarkably simple genome underlies highly malignant pediatric rhabdoid cancers Autor Ryan S. Lee, Chip Stewart, Scott L. Carter, Lauren Ambrogio, Kristian Cibulskis, Carrie Sougnez, Michael S. Lawrence, Daniel Auclair, Jaume Mora, Todd R. Golub, Jaclyn A. Biegel, Gad Getz, Charles W.M. Roberts

    Vydáno 2012
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  5. 5
    FireCloud, a scalable cloud-based platform for collaborative genome analysis: Strategies for reducing and controlling costs

    FireCloud, a scalable cloud-based platform for collaborative genome analysis: Strategies for reducing and controlling costs Autor Chet Birger, Megan Hanna, Edward A. Salinas, Jason C. Neff, Gordon Saksena, Dimitri Livitz, Daniel Rosebrock, Chip Stewart, Ignaty Leshchiner, Alexander Baumann, Douglas Voet, Kristian Cibulskis, Eric Banks, Anthony Philippakis, Gad Getz

    Vydáno 2017
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  6. 6
    A homozygous missense mutation in<i>HERC2</i>associated with global developmental delay and autism spectrum disorder

    A homozygous missense mutation in<i>HERC2</i>associated with global developmental delay and autism spectrum disorder Autor Erik G. Puffenberger, Robert N. Jinks, Heng Wang, Baozhong Xin, Christopher J. Fiorentini, Eric A. Sherman, Dominick Degrazio, Calvin B. Shaw, Carrie Sougnez, Kristian Cibulskis, Stacey Gabriel, Richard I. Kelley, D. Holmes Morton, Kevin A. Strauss

    Vydáno 2012
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  7. 7
    Absolute quantification of somatic DNA alterations in human cancer

    Absolute quantification of somatic DNA alterations in human cancer Autor Scott L. Carter, Kristian Cibulskis, Elena Helman, Aaron McKenna, Hui Shen, Travis Zack, Peter W. Laird, Robert C. Onofrio, Wendy Winckler, Barbara A. Weir, Rameen Beroukhim, David Pellman, Douglas A. Levine, Eric S. Lander, Matthew Meyerson, Gad Getz

    Vydáno 2012
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  8. 8
    Comprehensive analysis of cancer-associated somatic mutations in class I HLA genes

    Comprehensive analysis of cancer-associated somatic mutations in class I HLA genes Autor Sachet A. Shukla, Michael S. Rooney, Mohini Rajasagi, Grace Tiao, Philip M. Dixon, Michael S. Lawrence, Jonathan Stevens, William J. Lane, Jamie L. DellaGatta, Scott Steelman, Carrie Sougnez, Kristian Cibulskis, Adam Kieżun, Nir Hacohen, Vladimir Brusić, Catherine J. Wu, Gad Getz

    Vydáno 2015
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  9. 9
    RNF43 is frequently mutated in colorectal and endometrial cancers

    RNF43 is frequently mutated in colorectal and endometrial cancers Autor Marios Giannakis, Eran Hodis, Xinmeng Jasmine Mu, Mai Yamauchi, Joseph Rosenbluh, Kristian Cibulskis, Gordon Saksena, Michael S. Lawrence, Zhi Rong Qian, Reiko Nishihara, Eliezer M. Van Allen, William C. Hahn, Stacey Gabriel, Eric S. Lander, Gad Getz, Shuji Ogino, Charles S. Fuchs, Levi A. Garraway

    Vydáno 2014
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  10. 10
    A framework for variation discovery and genotyping using next-generation DNA sequencing data

    A framework for variation discovery and genotyping using next-generation DNA sequencing data Autor Mark A. DePristo, Eric Banks, Ryan Poplin, Kiran Garimella, Jared Maguire, Christopher Hartl, Anthony Philippakis, Guillermo del Angel, Manuel A. Rivas, Matt Hanna, Aaron McKenna, Tim Fennell, Andrew Kernytsky, Andrey Sivachenko, Kristian Cibulskis, Stacey Gabriel, David Altshuler, Mark J. Daly

    Vydáno 2011
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  11. 11
    Systematic identification of personal tumor-specific neoantigens in chronic lymphocytic leukemia

    Systematic identification of personal tumor-specific neoantigens in chronic lymphocytic leukemia Autor Mohini Rajasagi, Sachet A. Shukla, Edward F. Fritsch, Derin B. Keskin, David S. DeLuca, Ellese M. Carmona, Wandi Zhang, Carrie Sougnez, Kristian Cibulskis, John Sidney, Kristen E. Stevenson, Jerome Ritz, Donna Neuberg, Vladimir Brusić, Stacey Gabriel, Eric S. Lander, Gad Getz, Nir Hacohen, Catherine J. Wu

    Vydáno 2014
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  12. 12
    Genetic and Clonal Dissection of Murine Small Cell Lung Carcinoma Progression by Genome Sequencing

    Genetic and Clonal Dissection of Murine Small Cell Lung Carcinoma Progression by Genome Sequencing Autor David G. McFadden, Thales Papagiannakopoulos, Amaro Taylor‐Weiner, Chip Stewart, Scott L. Carter, Kristian Cibulskis, Arjun Bhutkar, Aaron McKenna, Alison L. Dooley, Amanda Vernon, Carrie Sougnez, Scott Malstrom, Megan Heimann, Jennifer Park, Frances S. Chen, Anna F. Farago, Talya L. Dayton, Erica Shefler, Stacey Gabriel, Gad Getz, Tyler Jacks

    Vydáno 2014
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  13. 13
    Exome sequencing of pleuropulmonary blastoma reveals frequent biallelic loss of TP53 and two hits in DICER1 resulting in retention of 5p-derived miRNA hairpin loop sequences

    Exome sequencing of pleuropulmonary blastoma reveals frequent biallelic loss of TP53 and two hits in DICER1 resulting in retention of 5p-derived miRNA hairpin loop sequences Autor Trevor J. Pugh, Yu Wang, Jian Yang, Amanda L. Field, Lauren Ambrogio, S L Carter, Kristian Cibulskis, Petros Giannikopoulos, Adam Kieżun, J Kim, Aaron McKenna, Elizabeth Nickerson, Gad Getz, S Hoffher, Yoav H. Messinger, Louis P. Dehner, Charles W.M. Roberts, Carlos Rodríguez‐Galindo, Gretchen M. Williams, Christopher Rossi, Matthew Meyerson, D. Ashley Hill

    Vydáno 2014
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  14. 14
    Evolution and Impact of Subclonal Mutations in Chronic Lymphocytic Leukemia

    Evolution and Impact of Subclonal Mutations in Chronic Lymphocytic Leukemia Autor Dan A. Landau, Scott L. Carter, Petar Stojanov, Aaron McKenna, Kristen E. Stevenson, Michael S. Lawrence, Carrie Sougnez, Chip Stewart, Andrey Sivachenko, Lili Wang, Youzhong Wan, Wandi Zhang, Sachet A. Shukla, Alexander R. Vartanov, Stacey M. Fernandes, Gordon Saksena, Kristian Cibulskis, Bethany Tesar, Stacey Gabriel, Nir Hacohen, Matthew Meyerson, Eric S. Lander, Donna Neuberg, Jennifer R. Brown, Gad Getz, Catherine J. Wu

    Vydáno 2013
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  15. 15
    Exome Sequencing,<i>ANGPTL3</i>Mutations, and Familial Combined Hypolipidemia

    Exome Sequencing,<i>ANGPTL3</i>Mutations, and Familial Combined Hypolipidemia Autor Kiran Musunuru, James P. Pirruccello, Ron Do, Gina M. Peloso, Candace Guiducci, Carrie Sougnez, Kiran Garimella, Sheila Fisher, Justin Abreu, Andrew J. Barry, Tim Fennell, Eric Banks, Lauren Ambrogio, Kristian Cibulskis, Andrew Kernytsky, Elena González, Nicholas Rudzicz, James C. Engert, Mark A. DePristo, Mark J. Daly, Jonathan C. Cohen, Helen H. Hobbs, David Altshuler, Gustav Schonfeld, Stacey Gabriel, Pin Yue, Sekar Kathiresan

    Vydáno 2010
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  16. 16
    Drug-sensitive<i>FGFR2</i>mutations in endometrial carcinoma

    Drug-sensitive<i>FGFR2</i>mutations in endometrial carcinoma Autor Amit Dutt, Helga B. Salvesen, Tzu-Hsiu Chen, Alex H. Ramos, Robert C. Onofrio, Charlie Hatton, Richard Nicoletti, Wendy Winckler, Rupinder Grewal, Megan Hanna, Nicolas Wyhs, Liuda Ziaugra, Daniel J. Richter, Jone Trovik, Ingeborg B. Engelsen, Ingunn M. Stefansson, Tim Fennell, Kristian Cibulskis, Michael C. Zody, Lars A. Akslen, Stacey B. Gabriel, Kwok‐Kin Wong, William R. Sellers, Matthew Meyerson, Heidi Greulich

    Vydáno 2008
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  17. 17
    Integrative analysis of the melanoma transcriptome

    Integrative analysis of the melanoma transcriptome Autor Michael F. Berger, Joshua Z. Levin, Krishna G. Vijayendran, Andrey Sivachenko, Xian Adiconis, Jared Maguire, Laura A. Johnson, James Robinson, Roel G.W. Verhaak, Carrie Sougnez, Robert C. Onofrio, Liuda Ziaugra, Kristian Cibulskis, Elisabeth Laine, Jordi Barretina, Wendy Winckler, David E. Fisher, Gad Getz, Matthew Meyerson, David B. Jaffe, Stacey Gabriel, Eric S. Lander, Reinhard Dummer, Andreas Gnirke, Chad Nusbaum, Levi A. Garraway

    Vydáno 2010
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  18. 18
    Mutations in isocitrate dehydrogenase 1 and 2 occur frequently in intrahepatic cholangiocarcinomas and share hypermethylation targets with glioblastomas

    Mutations in isocitrate dehydrogenase 1 and 2 occur frequently in intrahepatic cholangiocarcinomas and share hypermethylation targets with glioblastomas Autor Pu Wang, Qiongzhu Dong, C. Zhang, P.N. Kuan, Yali Liu, William R. Jeck, Jesper B. Andersen, Wenqing Jiang, Gleb L. Savich, Ting Xu Tan, J. Todd Auman, Janelle M. Hoskins, Anne Misher, Catherine D. Moser, Scott Yourstone, Johnny Kim, Kristian Cibulskis, Gad Getz, Heike Hunt, Snorri S. Thorgeirsson, Lewis R. Roberts, Dingwei Ye, K-L Guan, Yue Xiong, L-X Qin, Derek Y. Chiang

    Vydáno 2012
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  19. 19
    MAP Kinase Pathway Alterations in <i>BRAF</i>-Mutant Melanoma Patients with Acquired Resistance to Combined RAF/MEK Inhibition

    MAP Kinase Pathway Alterations in <i>BRAF</i>-Mutant Melanoma Patients with Acquired Resistance to Combined RAF/MEK Inhibition Autor Nikhil Wagle, Eliezer M. Van Allen, Daniel J. Treacy, Dennie T. Frederick, Zachary A. Cooper, Amaro Taylor‐Weiner, Mara Rosenberg, Eva M. Goetz, Ryan J. Sullivan, Deborah Farlow, Dennis C. Friedrich, Kristin Anderka, Danielle Perrin, Cory M. Johannessen, Aaron McKenna, Kristian Cibulskis, Gregory V. Kryukov, Eran Hodis, Donald P. Lawrence, Sheila Fisher, Gad Getz, Stacey Gabriel, Scott L. Carter, Keith T. Flaherty, Jennifer A. Wargo, Levi A. Garraway

    Vydáno 2013
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  20. 20
    A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries

    A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries Autor Sheila Fisher, Andrew J. Barry, Justin Abreu, Brian Minie, Jillian Nolan, Toni Delorey, Geneva Young, Timothy J. Fennell, Alexander G. Allen, Lauren Ambrogio, Aaron M. Berlin, Brendan Blumenstiel, Kristian Cibulskis, Dennis C. Friedrich, Ryan C. Johnson, Frank Juhn, Brian Reilly, Ramy Shammas, John Stalker, Sean M. Sykes, J. E. Thompson, John B. Walsh, Andrew Zimmer, Zac Zwirko, Stacey B. Gabriel, Robert Nicol, Chad Nusbaum

    Vydáno 2011
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