Search Results - Igor V. Grigoriev

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  1. 1
    FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation

    FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation by Byoungnam Min, Igor V. Grigoriev, In‐Geol Choi

    Published 2017
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  2. 2
    The Fungal Tree of Life: From Molecular Systematics to Genome-Scale Phylogenies

    The Fungal Tree of Life: From Molecular Systematics to Genome-Scale Phylogenies by Joseph W. Spatafora, M. Catherine Aime, Igor V. Grigoriev, Francis Martin, Jason Stajich, Meredith Blackwell

    Published 2017
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  3. 3
    Rediscovery by Whole Genome Sequencing: Classical Mutations and Genome Polymorphisms in<i>Neurospora crassa</i>

    Rediscovery by Whole Genome Sequencing: Classical Mutations and Genome Polymorphisms in<i>Neurospora crassa</i> by Kevin McCluskey, Aric Wiest, Igor V. Grigoriev, Anna Lipzen, Joel Martin, Wendy Schackwitz, Scott Baker

    Published 2011
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  4. 4
    ContScout: sensitive detection and removal of contamination from annotated genomes

    ContScout: sensitive detection and removal of contamination from annotated genomes by Balázs Bálint, Zsolt Merényi, Botond Hegedüs, Igor V. Grigoriev, Zhihao Hou, Csenge Földi, László G. Nagy

    Published 2024
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  5. 5
    Comparative and transcriptional analysis of the predicted secretome in the lignocellulose‐degrading basidiomycete fungus <i>Pleurotus ostreatus</i>

    Comparative and transcriptional analysis of the predicted secretome in the lignocellulose‐degrading basidiomycete fungus <i>Pleurotus ostreatus</i> by Manuel Alfaro, Raúl Castanera, José Luis Lavín, Igor V. Grigoriev, José A. Oguiza, Lucı́a Ramı́rez, Antonio G. Pisabarro

    Published 2016
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  6. 6
    The GC-Rich Mitochondrial and Plastid Genomes of the Green Alga Coccomyxa Give Insight into the Evolution of Organelle DNA Nucleotide Landscape

    The GC-Rich Mitochondrial and Plastid Genomes of the Green Alga Coccomyxa Give Insight into the Evolution of Organelle DNA Nucleotide Landscape by David Roy Smith, Fabien Burki, Takashi Yamada, Jane Grimwood, Igor V. Grigoriev, James L. Van Etten, Patrick J. Keeling

    Published 2011
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  7. 7
    Genome-wide role of codon usage on transcription and identification of potential regulators

    Genome-wide role of codon usage on transcription and identification of potential regulators by Fangzhou Zhao, Zhipeng Zhou, Yunkun Dang, Hyunsoo Na, Catherine Adam, Anna Lipzen, Vivian Ng, Igor V. Grigoriev, Yi Liu

    Published 2021
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  8. 8
    Genetic dissection of interspecific differences in yeast thermotolerance

    Genetic dissection of interspecific differences in yeast thermotolerance by Carly Weiss, Jeremy I. Roop, Rylee K. Hackley, Julie N. Chuong, Igor V. Grigoriev, Adam P. Arkin, Jeffrey M. Skerker, Rachel B. Brem

    Published 2018
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  9. 9
    Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi

    Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi by Ying Chang, D’Ann Rochon, Satoshi Sekimoto, Yan Wang, Mansi Chovatia, Laura Sandor, Asaf Salamov, Igor V. Grigoriev, Jason Stajich, Joseph W. Spatafora

    Published 2021
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  10. 10
    Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides

    Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides by Francisco E. Nicolás, Simon Moxon, Juan P. de Haro, Silvia Calo, Igor V. Grigoriev, Santiago Torres‐Martínez, Vincent Moulton, Rosa M. Ruiz‐Vázquez, Tamás Dalmay

    Published 2010
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  11. 11
    Duplications and losses in gene families of rust pathogens highlight putative effectors

    Duplications and losses in gene families of rust pathogens highlight putative effectors by Amanda L. Pendleton, Katherine E. Smith, Nicolas Feau, Francis Martin, Igor V. Grigoriev, Richard C. Hamelin, C. Dana Nelson, J. Gordon Burleigh, John M. Davis

    Published 2014
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  12. 12
    Resolving the Mortierellaceae phylogeny through synthesis of multi-gene phylogenetics and phylogenomics

    Resolving the Mortierellaceae phylogeny through synthesis of multi-gene phylogenetics and phylogenomics by Natalie Vandepol, Julian A. Liber, Alessandro Desirò, Hyunsoo Na, Megan Kennedy, Kerrie Barry, Igor V. Grigoriev, Andrew N. Miller, Kerry O’Donnell, Jason Stajich, Gregory Bonito

    Published 2020
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  13. 13
    Massive Changes in Genome Architecture Accompany the Transition to Self-Fertility in the Filamentous Fungus<i>Neurospora tetrasperma</i>

    Massive Changes in Genome Architecture Accompany the Transition to Self-Fertility in the Filamentous Fungus<i>Neurospora tetrasperma</i> by Christopher E. Ellison, Jason Stajich, David J. Jacobson, Donald O. Natvig, Alla Lapidus, Brian Foster, Andrea Aerts, Robert Riley, Erika Lindquist, Igor V. Grigoriev, John W. Taylor

    Published 2011
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  14. 14
    Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution

    Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution by Gang Tao, Steven Ahrendt, Shingo Miyauchi, Xia Zhu, Hao Peng, Kurt LaButti, Alicia Clum, Richard D. Hayes, Patrick Chain, Igor V. Grigoriev, Gregory Bonito, Francis Martin

    Published 2025
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  15. 15
    The central role of selenium in the biochemistry and ecology of the harmful pelagophyte, Aureococcus anophagefferens

    The central role of selenium in the biochemistry and ecology of the harmful pelagophyte, Aureococcus anophagefferens by Christopher J. Gobler, Alexei Lobanov, Ying Zhong Tang, Anton A. Turanov, Yan Zhang, Martina A. Doblin, Gordon T. Taylor, Sergio A. Sañudo‐Wilhelmy, Igor V. Grigoriev, Vadim N. Gladyshev

    Published 2013
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  16. 16
    Widespread Polycistronic Transcripts in Fungi Revealed by Single-Molecule mRNA Sequencing

    Widespread Polycistronic Transcripts in Fungi Revealed by Single-Molecule mRNA Sequencing by Sean P. Gordon, Elizabeth Tseng, Asaf Salamov, Jiwei Zhang, Xiandong Meng, Zhiying Zhao, Dongwan Kang, Jason G. Underwood, Igor V. Grigoriev, Melania Figueroa, Jonathan S. Schilling, Feng Chen, Zhong Wang

    Published 2015
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  17. 17
    Fueling the future with fungal genomics

    Fueling the future with fungal genomics by Igor V. Grigoriev, Daniel Cullen, Stephen B. Goodwin, David S. Hibbett, Thomas W. Jeffries, Christian P. Kubicek, Cheryl R. Kuske, Jon Magnuson, Francis Martin, Joseph W. Spatafora, Adrian Tsang, Scott Baker

    Published 2011
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  18. 18
    MycoCosm portal: gearing up for 1000 fungal genomes

    MycoCosm portal: gearing up for 1000 fungal genomes by Igor V. Grigoriev, Roman Nikitin, Sajeet Haridas, Alan Kuo, Robin A. Ohm, Robert Otillar, Robert Riley, Asaf Salamov, Xueling Zhao, Frank Korzeniewski, Tatyana I. Smirnova, Henrik Nordberg, Inna Dubchak, Igor Shabalov

    Published 2013
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  19. 19
    Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina

    Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina by Teeratas Kijpornyongpan, Stephen J. Mondo, Kerrie Barry, Laura Sandor, Juna Lee, Anna Lipzen, Jasmyn Pangilinan, Kurt LaButti, Matthieu Hainaut, Bernard Henrissat, Igor V. Grigoriev, Joseph W. Spatafora, M. Catherine Aime

    Published 2018
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  20. 20
    Genomic and Genetic Insights Into a Cosmopolitan Fungus, Paecilomyces variotii (Eurotiales)

    Genomic and Genetic Insights Into a Cosmopolitan Fungus, Paecilomyces variotii (Eurotiales) by Andrew S. Urquhart, Stephen J. Mondo, Miia Mäkelä, James K. Hane, Ad Wiebenga, Guifen He, Sirma Mihaltcheva, Jasmyn Pangilinan, Anna Lipzen, Kerrie Barry, Ronald P. de Vries, Igor V. Grigoriev, Alexander Idnurm

    Published 2018
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