Search Results - Gad Getz

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  1. 1
    Coupled two-way clustering analysis of gene microarray data

    Coupled two-way clustering analysis of gene microarray data by Gad Getz, Erel Levine, Eytan Domany

    Published 2000
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  2. 2
    Making sense of cancer genomic data

    Making sense of cancer genomic data by Lynda Chin, William C. Hahn, Gad Getz, Matthew Meyerson

    Published 2011
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  3. 3
    High order chromatin architecture shapes the landscape of chromosomal alterations in cancer

    High order chromatin architecture shapes the landscape of chromosomal alterations in cancer by Geoffrey Fudenberg, Gad Getz, Matthew Meyerson, Leonid A. Mirny

    Published 2011
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  4. 4
    RNA-SeQC 2: efficient RNA-seq quality control and quantification for large cohorts

    RNA-SeQC 2: efficient RNA-seq quality control and quantification for large cohorts by Aaron Graubert, François Aguet, Arvind Ravi, Kristin Ardlie, Gad Getz

    Published 2021
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  5. 5
    A Deep Dive into Single-Cell RNA Sequencing Foundation Models

    A Deep Dive into Single-Cell RNA Sequencing Foundation Models by Rebecca Boiarsky, Nalini Singh, Alejandro Buendia, Gad Getz, David Sontag

    Published 2023
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  6. 6
    Outcome signature genes in breast cancer: is there a unique set?

    Outcome signature genes in breast cancer: is there a unique set? by Liat Ein‐Dor, Itai Kela, Gad Getz, David Givol, Eytan Domany

    Published 2004
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  7. 7
    Comparative gene marker selection suite

    Comparative gene marker selection suite by Joshua Gould, Gad Getz, Stefano Monti, Michael Reich, Jill P. Mesirov

    Published 2006
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  8. 8
    Molecular and Genetic Properties of Tumors Associated with Local Immune Cytolytic Activity

    Molecular and Genetic Properties of Tumors Associated with Local Immune Cytolytic Activity by Michael S. Rooney, Sachet A. Shukla, Catherine J. Wu, Gad Getz, Nir Hacohen

    Published 2015
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  9. 9
    Calling Somatic SNVs and Indels with Mutect2

    Calling Somatic SNVs and Indels with Mutect2 by David Benjamin, Takuto Sato, Kristian Cibulskis, Gad Getz, Chip Stewart, Lee Lichtenstein

    Published 2019
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  10. 10
    Data analysis: Create a cloud commons

    Data analysis: Create a cloud commons by Lincoln Stein, Bartha Maria Knoppers, Peter J. Campbell, Gad Getz, Jan O. Korbel

    Published 2015
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  11. 11
    GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers

    GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers by Craig H. Mermel, Steven E. Schumacher, Barbara Hill, Matthew Meyerson, Rameen Beroukhim, Gad Getz

    Published 2011
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  12. 12
    Integrative genomics viewer

    Integrative genomics viewer by James Robinson, Helga Thorvaldsdóttir, Wendy Winckler, Mitchell Guttman, Eric S. Lander, Gad Getz, Jill P. Mesirov

    Published 2011
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  13. 13
    ContEst: estimating cross-contamination of human samples in next-generation sequencing data

    ContEst: estimating cross-contamination of human samples in next-generation sequencing data by Kristian Cibulskis, Aaron McKenna, Tim Fennell, Eric Banks, Mark A. DePristo, Gad Getz

    Published 2011
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  14. 14
    Comprehensive assessment of cancer missense mutation clustering in protein structures

    Comprehensive assessment of cancer missense mutation clustering in protein structures by Atanas Kamburov, Michael S. Lawrence, Paz Polak, Ignaty Leshchiner, Kasper Lage, Todd R. Golub, Eric S. Lander, Gad Getz

    Published 2015
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  15. 15
    Oncotator: Cancer Variant Annotation Tool

    Oncotator: Cancer Variant Annotation Tool by Alex H. Ramos, Lee Lichtenstein, Manaswi Gupta, Michael S. Lawrence, Trevor J. Pugh, Gordon Saksena, Matthew Meyerson, Gad Getz

    Published 2015
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  16. 16
    Gene expression analysis reveals a strong signature of an interferon-induced pathway in childhood lymphoblastic leukemia as well as in breast and ovarian cancer

    Gene expression analysis reveals a strong signature of an interferon-induced pathway in childhood lymphoblastic leukemia as well as in breast and ovarian cancer by Uri Einav, Yuval Tabach, Gad Getz, Assif Yitzhaky, Uğur Özbek, Ninette Amariglio, Shai Izraeli, Gideon Rechavi, Eytan Domany

    Published 2005
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  17. 17
    Invasive Bladder Cancer: Genomic Insights and Therapeutic Promise

    Invasive Bladder Cancer: Genomic Insights and Therapeutic Promise by Jaegil Kim, Rehan Akbani, Chad J. Creighton, Seth P. Lerner, John N. Weinstein, Gad Getz, David J. Kwiatkowski

    Published 2015
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  18. 18
    PathSeq: software to identify or discover microbes by deep sequencing of human tissue

    PathSeq: software to identify or discover microbes by deep sequencing of human tissue by Aleksandar D. Kostic, Akinyemi I. Ojesina, Chandra Sekhar Pedamallu, Joonil Jung, Roel G.W. Verhaak, Gad Getz, Matthew Meyerson

    Published 2011
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  19. 19
    Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability

    Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability by Yotam Drier, Michael S. Lawrence, Scott L. Carter, Chip Stewart, Stacey Gabriel, Eric S. Lander, Matthew Meyerson, Rameen Beroukhim, Gad Getz

    Published 2012
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  20. 20
    Passenger Hotspot Mutations in Cancer

    Passenger Hotspot Mutations in Cancer by Julian M. Hess, André Bernards, Jaegil Kim, Mendy Miller, Amaro Taylor‐Weiner, Nicholas J. Haradhvala, Michael S. Lawrence, Gad Getz

    Published 2019
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