نتائج البحث - Chip Stewart

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  1. 1
    Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression

    Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression حسب Michele Busby, Chip Stewart, Chase Miller, Krzysztof R. Grzȩda, Gábor Marth

    منشور في 2013
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  2. 2
    Calling Somatic SNVs and Indels with Mutect2

    Calling Somatic SNVs and Indels with Mutect2 حسب David Benjamin, Takuto Sato, Kristian Cibulskis, Gad Getz, Chip Stewart, Lee Lichtenstein

    منشور في 2019
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  3. 3
    Interobserver Agreement Among Sleep Scorers From Different Centers in a Large Dataset

    Interobserver Agreement Among Sleep Scorers From Different Centers in a Large Dataset حسب Robert G. Norman, Ivan Pal, Chip Stewart, Joyce A. Walsleben, David M. Rapoport

    منشور في 2000
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  4. 4
    MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping

    MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping حسب Wan-Ping Lee, Michael P. Strömberg, Alistair Ward, Chip Stewart, Erik Garrison, Gábor Marth

    منشور في 2014
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  5. 5
    Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability

    Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability حسب Yotam Drier, Michael S. Lawrence, Scott L. Carter, Chip Stewart, Stacey Gabriel, Eric S. Lander, Matthew Meyerson, Rameen Beroukhim, Gad Getz

    منشور في 2012
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  6. 6
    SVelfie: A method for discovering cancer drivers based on enrichment of likely functional structural variants

    SVelfie: A method for discovering cancer drivers based on enrichment of likely functional structural variants حسب Xavi Loinaz, Judith Dagan, Jean-Baptiste Alberge, Antonia Kowalewski, Mendy Miller, Julian M. Hess, Esther Rheinbay, Chip Stewart, Gad Getz

    منشور في 2025
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  7. 7
    DeTiN: overcoming tumor-in-normal contamination

    DeTiN: overcoming tumor-in-normal contamination حسب Amaro Taylor‐Weiner, Chip Stewart, Thomas J. Giordano, Mendy Miller, Mara Rosenberg, Alyssa Macbeth, Niall J. Lennon, Esther Rheinbay, Dan‐Avi Landau, Catherine J. Wu, Gad Getz

    منشور في 2018
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  8. 8
    A remarkably simple genome underlies highly malignant pediatric rhabdoid cancers

    A remarkably simple genome underlies highly malignant pediatric rhabdoid cancers حسب Ryan S. Lee, Chip Stewart, Scott L. Carter, Lauren Ambrogio, Kristian Cibulskis, Carrie Sougnez, Michael S. Lawrence, Daniel Auclair, Jaume Mora, Todd R. Golub, Jaclyn A. Biegel, Gad Getz, Charles W.M. Roberts

    منشور في 2012
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  9. 9
    FireCloud, a scalable cloud-based platform for collaborative genome analysis: Strategies for reducing and controlling costs

    FireCloud, a scalable cloud-based platform for collaborative genome analysis: Strategies for reducing and controlling costs حسب Chet Birger, Megan Hanna, Edward A. Salinas, Jason C. Neff, Gordon Saksena, Dimitri Livitz, Daniel Rosebrock, Chip Stewart, Ignaty Leshchiner, Alexander Baumann, Douglas Voet, Kristian Cibulskis, Eric Banks, Anthony Philippakis, Gad Getz

    منشور في 2017
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  10. 10
    Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation

    Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation حسب Maura Costello, Trevor J. Pugh, Timothy J. Fennell, Chip Stewart, Lee Lichtenstein, James C. Meldrim, Jennifer Fostel, Dennis C. Friedrich, Danielle Perrin, Danielle Dionne, Sharon Kim, Stacey Gabriel, Eric S. Lander, Sheila Fisher, Gad Getz

    منشور في 2013
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  11. 11
    SvABA: genome-wide detection of structural variants and indels by local assembly

    SvABA: genome-wide detection of structural variants and indels by local assembly حسب Jeremiah A. Wala, Pratiti Bandopadhayay, Noah F. Greenwald, Ryan O’Rourke, Ted Sharpe, Chip Stewart, Steve Schumacher, Yilong Li, Joachim Weischenfeldt, Xiaotong Yao, Chad Nusbaum, Peter J. Campbell, Gad Getz, Matthew Meyerson, Cheng‐Zhong Zhang, Marcin Imieliński, Rameen Beroukhim

    منشور في 2018
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  12. 12
    Genomic analyses of PMBL reveal new drivers and mechanisms of sensitivity to PD-1 blockade

    Genomic analyses of PMBL reveal new drivers and mechanisms of sensitivity to PD-1 blockade حسب Bjoern Chapuy, Chip Stewart, Andrew Dunford, Jaegil Kim, Kirsty Wienand, Atanas Kamburov, Gabriel K. Griffin, Pei-Hsuan Chen, Ana Lako, Robert Redd, Claire McEwen Cote, Matthew D. Ducar, Aaron R. Thorner, Scott J. Rodig, Gad Getz, Margaret A. Shipp

    منشور في 2019
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  13. 13
    Exome sequencing of lymphomas from three dog breeds reveals somatic mutation patterns reflecting genetic background

    Exome sequencing of lymphomas from three dog breeds reveals somatic mutation patterns reflecting genetic background حسب Ingegerd Elvers, Jason Turner-Maier, Ross Swofford, Michele Koltookian, Jeremy Johnson, Chip Stewart, Cheng-Zhong Zhang, Steven E. Schumacher, Rameen Beroukhim, Mara Rosenberg, Rachael Thomas, Evan Mauceli, Gad Getz, Federica Di Palma, Jaime F. Modiano, Matthew Breen, Kerstin Lindblad‐Toh, Jessica Alföldi

    منشور في 2015
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  14. 14
    RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues

    RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues حسب Keren Yizhak, François Aguet, Jaegil Kim, Julian M. Hess, Kirsten Kübler, Jonna Grimsby, Ruslana Frazer, Hailei Zhang, Nicholas J. Haradhvala, Daniel Rosebrock, Dimitri Livitz, Xiao Li, Eila Arich-Landkof, Noam Shoresh, Chip Stewart, Ayellet V. Segrè, Philip A. Branton, Paz Polak, Kristin Ardlie, Gad Getz

    منشور في 2019
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  15. 15
    Genomic signatures of past and present chromosomal instability in Barrett’s esophagus and early esophageal adenocarcinoma

    Genomic signatures of past and present chromosomal instability in Barrett’s esophagus and early esophageal adenocarcinoma حسب Chunyang Bao, Richard W. Tourdot, Gregory J. Brunette, Chip Stewart, Lili Sun, Hideo Baba, Masayuki Watanabe, Agoston T. Agoston, Kunal Jajoo, Jon M. Davison, Katie S. Nason, Gad Getz, Kenneth K. Wang, Yu Imamura, Robert D. Odze, Adam J. Bass, Matthew D. Stachler, Cheng‐Zhong Zhang

    منشور في 2023
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  16. 16
    Genetic and Clonal Dissection of Murine Small Cell Lung Carcinoma Progression by Genome Sequencing

    Genetic and Clonal Dissection of Murine Small Cell Lung Carcinoma Progression by Genome Sequencing حسب David G. McFadden, Thales Papagiannakopoulos, Amaro Taylor‐Weiner, Chip Stewart, Scott L. Carter, Kristian Cibulskis, Arjun Bhutkar, Aaron McKenna, Alison L. Dooley, Amanda Vernon, Carrie Sougnez, Scott Malstrom, Megan Heimann, Jennifer Park, Frances S. Chen, Anna F. Farago, Talya L. Dayton, Erica Shefler, Stacey Gabriel, Gad Getz, Tyler Jacks

    منشور في 2014
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  17. 17
    Comprehensive analysis of tumour initiation, spatial and temporal progression under multiple lines of treatment

    Comprehensive analysis of tumour initiation, spatial and temporal progression under multiple lines of treatment حسب Ignaty Leshchiner, Dimitri Livitz, Justin F. Gainor, Daniel Rosebrock, Oliver Spiro, Aina Zurita Martinez, Edmund A. Mroz, W. Marston Linehan, Chip Stewart, Seungchan Kim, Liudmila Elagina, Ivana Božić, Mari Mino‐Kenudson, Marguerite Rooney, Sai‐Hong Ignatius Ou, Catherine J. Wu, James W. Rocco, Jeffrey A. Engelman, Alice T. Shaw, Gad Getz

    منشور في 2018
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  18. 18
    A Comprehensive Map of Mobile Element Insertion Polymorphisms in Humans

    A Comprehensive Map of Mobile Element Insertion Polymorphisms in Humans حسب Chip Stewart, Deniz Kural, Michael P. Strömberg, Jerilyn A. Walker, Miriam K. Konkel, Adrian M. Stütz, Alexander E. Urban, Fabian Grubert, Hugo Y. K. Lam, Wan-Ping Lee, Michele Busby, Amit Indap, Erik Garrison, Chad D. Huff, Jinchuan Xing, M Snyder, Lynn B. Jorde, Mark A. Batzer, Jan O. Korbel, Gábor Marth

    منشور في 2011
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  19. 19
    Genomic analyses of flow-sorted Hodgkin Reed-Sternberg cells reveal complementary mechanisms of immune evasion

    Genomic analyses of flow-sorted Hodgkin Reed-Sternberg cells reveal complementary mechanisms of immune evasion حسب Kirsty Wienand, Bjoern Chapuy, Chip Stewart, Andrew Dunford, David Wu, Jaegil Kim, Atanas Kamburov, Timothy R. Wood, Fathima Zumla Cader, Matthew D. Ducar, Aaron R. Thorner, Anwesha Nag, Alexander T. Heubeck, Michael Buonopane, Robert Redd, Kamil Bojarczuk, Lee N. Lawton, Philippe Armand, Scott J. Rodig, Jonathan R. Fromm, Gad Getz, Margaret A. Shipp

    منشور في 2019
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  20. 20
    Paired exome analysis of Barrett's esophagus and adenocarcinoma

    Paired exome analysis of Barrett's esophagus and adenocarcinoma حسب Matthew D. Stachler, Amaro Taylor‐Weiner, Shouyong Peng, Aaron McKenna, Agoston T. Agoston, Robert D. Odze, Jon M. Davison, Katie S. Nason, Massimo Loda, Ignaty Leshchiner, Chip Stewart, Petar Stojanov, Sara Seepo, Michael S. Lawrence, Daysha Ferrer-Torres, Jules Lin, Andrew C. Chang, Stacey Gabriel, Eric S. Lander, David G. Beer, Gad Getz, Scott L. Carter, Adam J. Bass

    منشور في 2015
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