Search Results - Aditya Deshpande

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  1. 1
    Uroplakin 3a+ Cells Are a Distinctive Population of Epithelial Progenitors that Contribute to Airway Maintenance and Post-injury Repair

    Uroplakin 3a+ Cells Are a Distinctive Population of Epithelial Progenitors that Contribute to Airway Maintenance and Post-injury Repair by Arjun Guha, Aditya Deshpande, Aradhya Jain, Paola Sebastiani, Wellington V. Cardoso

    Published 2017
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  2. 2
    Recurrent somatic mutations as predictors of immunotherapy response

    Recurrent somatic mutations as predictors of immunotherapy response by Zoran Gajic, Aditya Deshpande, Mateusz Legut, Marcin Imieliński, Neville E. Sanjana

    Published 2022
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  3. 3
    Guided Tissue Regeneration Membranes: Review of Innovations and Applications in Immunocompromised Patients

    Guided Tissue Regeneration Membranes: Review of Innovations and Applications in Immunocompromised Patients by Man Hung, Katherine Sanders, Aditya Deshpande, Roshni Trivedi, Connor Schwartz, Amir Mohajeri

    Published 2025
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  4. 4
    Machine learning for cognitive behavioral analysis: datasets, methods, paradigms, and research directions

    Machine learning for cognitive behavioral analysis: datasets, methods, paradigms, and research directions by Priya Bhatt, Amanrose Sethi, Vaibhav Tasgaonkar, Jugal Shroff, Isha Pendharkar, Aditya Desai, Pratyush Sinha, Aditya Deshpande, Gargi Joshi, Anil Rahate, Priyanka Jain, Rahee Walambe, Ketan Kotecha, N. K. Jain

    Published 2023
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  5. 5
    Nanopore sequencing of DNA concatemers reveals higher-order features of chromatin structure

    Nanopore sequencing of DNA concatemers reveals higher-order features of chromatin structure by Netha Ulahannan, Matthew Pendleton, Aditya Deshpande, Stefan Schwenk, Julie M. Behr, Xiaoguang Dai, Carly Tyer, Priyesh Rughani, Sarah Kudman, Emily M. Adney, Huasong Tian, David Wilkes, Juan Miguel Mosquera, David Stoddart, Daniel J. Turner, Sissel Juul, Eoghan Harrington, Marcin Imieliński

    Published 2019
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  6. 6
    Long-molecule scars of backup DNA repair in BRCA1- and BRCA2-deficient cancers

    Long-molecule scars of backup DNA repair in BRCA1- and BRCA2-deficient cancers by Jeremy Setton, Kevin Hadi, Zi-Ning Choo, Katherine S. Kuchin, Huasong Tian, Arnaud Da Cruz Paula, Joel Rosiene, Pier Selenica, Julie M. Behr, Xiaotong Yao, Aditya Deshpande, Michael Sigouros, Jyothi Manohar, Jones T. Nauseef, Juan Miguel Mosquera, Olivier Elemento, Britta Weigelt, Nadeem Riaz, Jorge S. Reis‐Filho, Simon N. Powell, Marcin Imieliński

    Published 2023
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  7. 7
    Most large structural variants in cancer genomes can be detected without long reads

    Most large structural variants in cancer genomes can be detected without long reads by Zi-Ning Choo, Julie M. Behr, Aditya Deshpande, Kevin Hadi, Xiaotong Yao, Huasong Tian, Kaori Takai, George Zakusilo, Joel Rosiene, Arnaud Da Cruz Paula, Britta Weigelt, Jeremy Setton, Nadeem Riaz, Simon N. Powell, Klaus J. Busam, Alexander N. Shoushtari, Charlotte E. Ariyan, Jorge S. Reis‐Filho, Titia de Lange, Marcin Imieliński

    Published 2023
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  8. 8
    Integrated mutational landscape analysis of uterine leiomyosarcomas

    Integrated mutational landscape analysis of uterine leiomyosarcomas by Jungmin Choi, Aránzazu Manzano, Weilai Dong, Stefania Bellone, Elena Bonazzoli, Luca Zammataro, Xiaotong Yao, Aditya Deshpande, Samir Zaidi, Adele Guglielmi, Barbara Gnutti, Nupur Nagarkatti, Joan Tymon‐Rosario, Justin Harold, Dennis Mauricio, Burak Zeybek, Gulden Menderes, Gary Altwerger, Kyungjo Jeong, Siming Zhao, Natália Buza, Pei Hui, Antonella Ravaggi, Eliana Bignotti, Chiara Romani, Paola Todeschini, Laura Zanotti, Franco Odicino, Sërgio Pecorelli, Laura Ardighieri, Kaya Bilgüvar, Charles M. Quick, Dan-Arin Silasi, Gloria S. Huang, Vaagn Andikyan, Mitchell Clark, Elena Ratner, Masoud Azodi, Marcin Imieliński, Peter E. Schwartz, Ludmil B. Alexandrov, Richard P. Lifton, Joseph Schlessinger, Alessandro D. Santin

    Published 2021
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  9. 9
    Distinct Classes of Complex Structural Variation Uncovered across Thousands of Cancer Genome Graphs

    Distinct Classes of Complex Structural Variation Uncovered across Thousands of Cancer Genome Graphs by Kevin Hadi, Xiaotong Yao, Julie M. Behr, Aditya Deshpande, Charalampos Xanthopoulakis, Huasong Tian, Sarah Kudman, Joel Rosiene, Madison Darmofal, Joseph DeRose, Rick Mortensen, Emily M. Adney, Alon Shaiber, Zoran Gajic, Michael Sigouros, Kenneth Eng, Jeremiah A. Wala, Kazimierz O. Wrzeszczyński, Kanika Arora, Minita Shah, Anne-Katrin Emde, Vanessa Felice, Mayu O. Frank, Robert B. Darnell, Mahmoud Ghandi, Franklin W. Huang, Sally M. Dewhurst, John Maciejowski, Titia de Lange, Jeremy Setton, Nadeem Riaz, Jorge S. Reis‐Filho, Simon N. Powell, David A. Knowles, Ed Reznik, Bud Mishra, Rameen Beroukhim, Michael C. Zody, Nicolas Robine, Kenji Oman, Carissa A. Sanchez, Mary K. Kuhner, Lucian P. Smith, Patricia C. Galipeau, Thomas G. Paulson, Brian J. Reid, Xiaohong Li, David Wilkes, Andrea Sboner, Juan Miguel Mosquera, Olivier Elemento, Marcin Imieliński

    Published 2020
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  10. 10
    Ultrasensitive plasma-based monitoring of tumor burden using machine-learning-guided signal enrichment

    Ultrasensitive plasma-based monitoring of tumor burden using machine-learning-guided signal enrichment by Adam J. Widman, Minita Shah, Amanda Frydendahl, Daniel Halmos, Cole C. Khamnei, Nadia Øgaard, Srinivas Rajagopalan, Anushri Arora, Aditya Deshpande, William F. Hooper, J. Quentin, Jake Bass, Mingxuan Zhang, Theophile Langanay, Laura Andersen, Zoe Steinsnyder, Will Liao, Mads H. Rasmussen, Tenna Vesterman Henriksen, Sarah Østrup Jensen, Jesper Nors, Christina Therkildsen, Jesús Alfonso López Sotélo, Ryan Brand, Joshua S. Schiffman, Ronak Shah, Alexandre Pellan Cheng, Colleen Maher, Lavinia Spain, Kate Krause, Dennie T. Frederick, Wendie Den Brok, Caroline Lohrisch, Tamara Shenkier, Christine Simmons, Diego Villa, Andrew J. Mungall, Richard A. Moore, Elena Zaikova, Viviana Cerda, Esther Kong, Daniel Lai, Murtaza Malbari, Melissa Marton, Dina Manaa, Lara Winterkorn, Karen A. Gelmon, Margaret K. Callahan, Genevieve M. Boland, Catherine Potenski, Jedd D. Wolchok, Ashish Saxena, Samra Turajlic, Marcin Imieliński, Michael F. Berger, Samuel Aparício, Nasser K. Altorki, Michael A. Postow, Nicolas Robine, Claus L. Andersen, Dan A. Landau

    Published 2024
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  11. 11
    Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway

    Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway by Jian Carrot‐Zhang, Xiaotong Yao, Siddhartha Devarakonda, Aditya Deshpande, Jeffrey S. Damrauer, Tiago C. Silva, Christopher K. Wong, Hyo Young Choi, Ina Felau, A. Gordon Robertson, Mauro A. A. Castro, Lisui Bao, Esther Rheinbay, Eric Minwei Liu, Tuan Trieu, David Haan, Christina Yau, Toshinori Hinoue, Yuexin Liu, Ofer Shapira, Kiran Kumar, Karen Mungall, Hailei Zhang, Jake June-Koo Lee, Ashton C. Berger, Galen F. Gao, Binyamin Zhitomirsky, Wen-Wei Liang, Meng Zhou, Sitapriya Moorthi, Alice H. Berger, Jun Li, Michael C. Zody, Li Ding, Andrew D. Cherniack, Gad Getz, Olivier Elemento, Christopher C. Benz, Joshua M. Stuart, Jean C. Zenklusen, Rameen Beroukhim, Jason C. Chang, Joshua D. Campbell, D. Neil Hayes, Lixing Yang, Peter W. Laird, John N. Weinstein, David J. Kwiatkowski, Ming‐Sound Tsao, William D. Travis, Ekta Khurana, Benjamin P. Berman, Katherine A. Hoadley, Nicolas Robine, Matthew Meyerson, Ramaswamy Govindan, Marcin Imieliński, Kanika Arora, Minita Shah, Jennifer M. G. Shelton, Reanne Bowlby, Verena Friedl, Mary J. Goldman, Brian Craft, David I. Heiman, Iman Hajirasouliha, Camir Ricketts, Pavana Anur, Kami Chiotti, Rory Johnson, John A. Demchok, Martin L. Ferguson, Anab Kemal, Roy Tarnuzzer, Linghua Wang, Liming Yang, Paul T. Spellman, Benjamin J. Raphael, Rehan Akbani, Jingchun Zhu, Steven J.M. Jones, Hui Shen

    Published 2021
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