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Proposed methods for testing and selecting the ERCC external RNA controls 著者: Laura Reid

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Using ANOVA to Analyze Microarray Data 著者: Gary A. Churchill

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Normalizing DNA Microarray Data 著者: Martin Bilban, Lukas K. Buehler, Steven R. Head, Gernot Desoyé, Vito Quaranta

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Hybridization Cross-Reactivity within Homologous Gene Families on Glass cDNA Microarrays 著者: Elizabeth Evertsz, Janice Au-Young, Michael Ruvolo, Abelyn Lim, Mark A. Reynolds

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De novo assembly of the Carcinus maenas transcriptome and characterization of innate immune system pathways 著者: Bas Verbruggen, Lisa K. Bickley, Eduarda M. Santos, Charles R. Tyler, Grant D. Stentiford, Kelly S. Bateman, Ronny van Aerle

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Discovering biomarkers from gene expression data for predicting cancer subgroups using neural networks and relational fuzzy clustering 著者: Nikhil R. Pal, Kripamoy Aguan, Animesh Sharma, S. Amari

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SMART amplification combined with cDNA size fractionation in order to obtain large full-length clones 著者: Ruth Wellenreuther, Ingo Schupp, Annemarie Poustka, Stefan Wiemann

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Genome BLAST distance phylogenies inferred from whole plastid and whole mitochondrion genome sequences 著者: Alexander F. Auch, Stefan R. Henz, Barbara R. Holland, Markus Göker

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Fast and sensitive multiple alignment of large genomic sequences 著者: Michael Brudno, Michael A. Chapman, Berthold Göttgens, Serafim Batzoglou, Burkhard Morgenstern

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A new non-linear normalization method for reducing variability in DNA microarray experiments 著者: Christopher T. Workman, Lars Juhl Jensen, Hanne Jarmer, Randy M. Berka, Laurent Gautier, Henrik Bjørn Nielser, Hans-Henrik Saxild, Claus Henrik Nielsen, Søren Brunak, Steen Knudsen

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Understanding the pathogenesis of Alzheimer’s disease: will RNA‐Seq realize the promise of transcriptomics? 著者: Greg T. Sutherland, Michael Janitz, Jillian J. Kril

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Gene finding in novel genomes 著者: Ian Korf

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Performance evaluation of commercial short-oligonucleotide microarrays and the impact of noise in making cross-platform correlations 著者: Richard Shippy, Timothy J. Sendera, Randall Lockner, Chockalingam Palaniappan, Tamma Kaysser-Kranich, George S. Watts, John P. Alsobrook

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Alternative mapping of probes to genes for Affymetrix chips 著者: Laurent Gautier, Morten Hylander Møller, Lennart Friis‐Hansen, Steen Knudsen

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Optimized LOWESS normalization parameter selection for DNA microarray data 著者: John A Berger, Sampsa Hautaniemi, Anna‐Kaarina Järvinen, Henrik Edgren, S.K. Mitra, Jaakko Astola

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The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacte... 著者: Iris Brune, Karina Brinkrolf, Jörn Kalinowski, Alfred Pühler, Andreas Tauch

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Core oxidative stress response in Aspergillus nidulans 著者: Tamás Emri, Vera Etelka Szarvas, Erzsébet Orosz, Károly Antal, Hee-Soo Park, Kap‐Hoon Han, Jae‐Hyuk Yu, István Pócsi

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Design and implementation of microarray gene expression markup language (MAGE-ML) 著者: Paul T. Spellman, Michael Miller, Jason Stewart, Charles Troup, Uğis Sarkans, Steve Chervitz, Derek Bernhart, Gavin Sherlock, Catherine A. Ball, Marc Lepage, Marcin Świątek, W.L. Marks, Jason Gonçalves, Scott Markel, Daniel Iordan, Mohammadreza Shojatalab, Angel Pizarro, Joe White, Robert Hubley, Eric W. Deutsch, Martin Senger, Bruce J. Aronow, Alan J. Robinson, Doug Bassett, Christian J. Stoeckert, Alvis Brāzma

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Ribosome profiling reveals translation control as a key mechanism generating differential gene expression in Trypanosoma cruzi 著者: Pablo Smircich, Guillermo Eastman, Saloê Bispo, Marı́a Ana Duhagon, Eloise Pavão Guerra-Slompo, Beatríz Garat, Samuel Goldenberg, David J. Munroe, Bruno Dallagiovanna, Fabíola Holetz, José Sotelo‐Silveira

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Predicting DNA-binding sites of proteins from amino acid sequence 著者: Changhui Yan, Michael Terribilini, Feihong Wu, Robert L. Jernigan, Drena Dobbs, Vasant Honavar

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