Suchergebnisse

Second-generation PLINK: rising to the challenge of larger and richer datasets von Christopher Chang, Carson C. Chow, Laurent CAM Tellier, Shashaank Vattikuti, Shaun Purcell, James J. Lee

Volltext

DeepBlue epigenomic data server: programmatic data retrieval and analysis of epigenome region sets von Felipe Albrecht, Markus List, Christoph Bock, Thomas Lengauer

Volltext Volltext

CaFE: a tool for binding affinity prediction using end-point free energy methods von Hui Liu, Tingjun Hou

Volltext Volltext

Clinical records anonymisation and text extraction (CRATE): an open-source software system von Rudolf N. Cardinal

Volltext Volltext

The €100 lab: A 3D-printable open-source platform for fluorescence microscopy, optogenetics, and accurate temperature control during behaviour of zebrafish, Drosophila, and Caenorh... von André Maia Chagas, Lucia L. Prieto-Godino, Aristides B. Arrenberg, Tom Baden

Volltext Volltext

Datamonkey 2.0: A Modern Web Application for Characterizing Selective and Other Evolutionary Processes von Steven Weaver, Stephen D. Shank, Stephanie J. Spielman, Michael Li, Spencer V. Muse, Sergei L. Kosakovsky Pond

Volltext Volltext

Implementation and applications of EMOD, an individual-based multi-disease modeling platform von Anna Bershteyn, Jaline Gerardin, Daniel Bridenbecker, Christopher Lorton, Jonathan Bloedow, Robert S. Baker, Guillaume Chabot‐Couture, Ye Chen, Thomas Fischle, Kurt Frey, Jillian Gauld, Hao Hu, Amanda S Izzo, Daniel J. Klein, Dejan Lukacevic, Kevin McCarthy, Joel C. Miller, André Lin Ouédraogo, T. Alex Perkins, Jeffrey Steinkraus, Quirine A. ten Bosch, Hung-Fu Ting, Svetlana Titova, Bradley G. Wagner, Philip A. Welkhoff, Edward A. Wenger, Christian N Wiswell

Volltext Volltext

ipyrad: Interactive assembly and analysis of RADseq datasets von Deren A. R. Eaton, Isaac Overcast

Volltext Volltext

Homology modeling in the time of collective and artificial intelligence von Tareq Hameduh, Yazan Haddad, Vojtěch Adam, Zbyněk Heger

Volltext

SpikeInterface, a unified framework for spike sorting von Alessio Paolo Buccino, Cole Hurwitz, Samuel Garcia, Jeremy F. Magland, Joshua H. Siegle, Roger Hurwitz, Matthias H. Hennig

Volltext

The <scp>ImageJ</scp> ecosystem: Open‐source software for image visualization, processing, and analysis von Alexandra B. Schroeder, Ellen T. A. Dobson, Curtis Rueden, Pavel Tomančák, Florian Jug, Kevin W. Eliceiri

Volltext

LocusZoom.js: interactive and embeddable visualization of genetic association study results von Andrew P. Boughton, Ryan Welch, Matthew Flickinger, Peter VandeHaar, Daniel Taliun, Gonçalo R. Abecasis, Michael Boehnke

Volltext Volltext

cellxgene: a performant, scalable exploration platform for high dimensional sparse matrices von Colin Megill, Bruce Martin, Charlotte A. Weaver, Sidney M. Bell, L.M. Prins, Seve Badajoz, Brian McCandless, Angela Oliveira Pisco, Marcus Kinsella, Fiona Griffin, Justin Kiggins, Genevieve Haliburton, Arathi Mani, Matthew Weiden, Madison I. Dunitz, Maximilian Lombardo, Timmy Huang, Trent M. Smith, Signe Chambers, Jeremy Freeman, Jonah Cool, Ambrose Carr

Volltext

Reproducible Analysis Pipeline for Data Streams: Open-Source Software to Process Data Collected With Mobile Devices von Julio Vega, Meng Li, Kwesi Aguillera, Nikunj Goel, Echhit Joshi, Kirtiraj Khandekar, Krina C Durica, Abhineeth Reddy Kunta, Carissa A. Low

Volltext Volltext

MMDetection: Open MMLab Detection Toolbox and Benchmark von Kai Chen, Jiaqi Wang, Jiangmiao Pang, Yuhang Cao, Yu Xiong, Xiaoxiao Li, Shuyang Sun, Wansen Feng, Ziwei Liu, Jiarui Xu, Zheng Zhang, Dazhi Cheng, Chenchen Zhu, Tianheng Cheng, Qijie Zhao, Buyu Li, Xin Lü, Rui Zhu, Yue Wu, Jifeng Dai, Jingdong Wang, Jianping Shi, Wanli Ouyang, Chen Change Loy, Dahua Lin

Volltext

YaHS: yet another Hi-C scaffolding tool von Chenxi Zhou, Shane McCarthy, Richard Durbin

Volltext Volltext

scGPT: Towards Building a Foundation Model for Single-Cell Multi-omics Using Generative AI von Haotian Cui, Xiaoming Wang, Hassaan Maan, Kuan Pang, Fengning Luo, Bo Wang

Volltext Volltext

ProteinGym: Large-Scale Benchmarks for Protein Design and Fitness Prediction von Pascal Notin, Aaron W. Kollasch, Daniel P. Ritter, Lood van Niekerk, Steffan B. Paul, Hansen Spinner, Nathan Rollins, Ada Y. Shaw, Ruben Weitzman, Jonathan Frazer, Mafalda Dias, Dinko Franceschi, Rose Orenbuch, Yarin Gal, Debora S. Marks

Volltext Volltext

WashU Epigenome Browser update 2025 von Chanrung Seng, Shane Liu, Wenjin Zhang, Xiaoyu Zhuo, Daofeng Li, Ting Wang

Volltext