Search Results - Zuo‐Fei Yuan

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  1. 1
    Proteome-wide acetylation dynamics in human cells

    Proteome-wide acetylation dynamics in human cells by Yekaterina Kori, Simone Sidoli, Zuo‐Fei Yuan, Peder J. Lund, Xiaolu Zhao, Benjamin A. Garcia

    Published 2017
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  2. 2
    Analysis of Histones H3 and H4 Reveals Novel and Conserved Post-Translational Modifications in Sugarcane

    Analysis of Histones H3 and H4 Reveals Novel and Conserved Post-Translational Modifications in Sugarcane by Izabel Cristina Freitas Moraes, Zuo‐Fei Yuan, Shichong Liu, Gláucia Mendes Souza, Benjamin A. García, J. Armando Casas-Mollano

    Published 2015
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  3. 3
    A Novel Quantitative Mass Spectrometry Platform for Determining Protein O-GlcNAcylation Dynamics

    A Novel Quantitative Mass Spectrometry Platform for Determining Protein O-GlcNAcylation Dynamics by Xiaoshi Wang, Zuo‐Fei Yuan, Jing Fan, Kelly R. Karch, Lauren E. Ball, John M. Denu, Benjamin A. Garcia

    Published 2016
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  4. 4
    EpiProfile 2.0: A Computational Platform for Processing Epi-Proteomics Mass Spectrometry Data

    EpiProfile 2.0: A Computational Platform for Processing Epi-Proteomics Mass Spectrometry Data by Zuo‐Fei Yuan, Simone Sidoli, Dylan M. Marchione, Johayra Simithy, Kevin A. Janssen, Mary R. Szurgot, Benjamin A. García

    Published 2018
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  5. 5
    Integrated genomic and proteomic analyses identify stimulus-dependent molecular changes associated with distinct modes of skeletal muscle atrophy

    Integrated genomic and proteomic analyses identify stimulus-dependent molecular changes associated with distinct modes of skeletal muscle atrophy by Liam C. Hunt, Flávia A. Graça, Vishwajeeth Pagala, Yong‐Dong Wang, Yuxin Li, Zuo‐Fei Yuan, Yiping Fan, Myriam Labelle, Junmin Peng, Fabio Demontis

    Published 2021
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  6. 6
    One minute analysis of 200 histone posttranslational modifications by direct injection mass spectrometry

    One minute analysis of 200 histone posttranslational modifications by direct injection mass spectrometry by Simone Sidoli, Yekaterina Kori, Mariana Lopes, Zuo‐Fei Yuan, Hee Jong Kim, Katarzyna Kulej, Kevin A. Janssen, Laura M. Agosto, Júlia Pinheiro Chagas da Cunha, Andrew J. Andrews, Benjamin A. García

    Published 2019
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  7. 7
    Stable-isotope-labeled Histone Peptide Library for Histone Post-translational Modification and Variant Quantification by Mass Spectrometry

    Stable-isotope-labeled Histone Peptide Library for Histone Post-translational Modification and Variant Quantification by Mass Spectrometry by Shu Lin, Samuel Wein, Michelle Gonzales-Cope, Gabriel Otte, Zuo‐Fei Yuan, Leila Afjehi‐Sadat, Tobias M Maile, Shelley L. Berger, A. John Rush, Jennie R. Lill, David Arnott, Benjamin A. García

    Published 2014
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  8. 8
    Naked Mole Rat Cells Have a Stable Epigenome that Resists iPSC Reprogramming

    Naked Mole Rat Cells Have a Stable Epigenome that Resists iPSC Reprogramming by Li Tan, Zhonghe Ke, Gregory Tombline, Nicholas Macoretta, Kevin Hayes, Xiao Tian, Ruitu Lv, Julia Ablaeva, Michael Gilbert, Natarajan V. Bhanu, Zuo‐Fei Yuan, Benjamin A. Garcia, Yujiang Geno Shi, Yang Shi, Andrei Seluanov, Vera Gorbunova

    Published 2017
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  9. 9
    Characterization of histone acylations links chromatin modifications with metabolism

    Characterization of histone acylations links chromatin modifications with metabolism by Johayra Simithy, Simone Sidoli, Zuo‐Fei Yuan, Mariel Coradin, Natarajan V. Bhanu, Dylan M. Marchione, Brianna J. Klein, Gleb A. Bazilevsky, Cheryl McCullough, Robert S. Magin, Tatiana G. Kutateladze, Nathaniel W. Snyder, Ronen Marmorstein, Benjamin A. García

    Published 2017
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  10. 10
    Interrogating Histone Acetylation and BRD4 as Mitotic Bookmarks of Transcription

    Interrogating Histone Acetylation and BRD4 as Mitotic Bookmarks of Transcription by Vivek Behera, Aaron J. Stonestrom, Nicole Hamagami, Chris C.‐S. Hsiung, Cheryl A. Keller, Belinda Giardine, Simone Sidoli, Zuo‐Fei Yuan, Natarajan V. Bhanu, Michael T. Werner, Hong‐Xin Wang, Benjamin A. García, Ross C. Hardison, Gerd A. Blobel

    Published 2019
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  11. 11
    A Strategy for Precise and Large Scale Identification of Core Fucosylated Glycoproteins

    A Strategy for Precise and Large Scale Identification of Core Fucosylated Glycoproteins by Wei Jia, Zhuang Lu, Yan Fu, Haipeng Wang, Leheng Wang, Hao Chi, Zuo‐Fei Yuan, Zhaobin Zheng, Lina Song, Huanhuan Han, Yimin Liang, Jinglan Wang, Yun Cai, Yukui Zhang, Yulin Deng, Wantao Ying, Si‐Min He, Xiaohong Qian

    Published 2009
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  12. 12
    Akt-Dependent Metabolic Reprogramming Regulates Tumor Cell Histone Acetylation

    Akt-Dependent Metabolic Reprogramming Regulates Tumor Cell Histone Acetylation by Joyce V. Lee, Alessandro Carrer, Supriya Shah, Nathaniel W. Snyder, Shuanzeng Wei, Sriram Venneti, Andrew J. Worth, Zuo‐Fei Yuan, Hee‐Woong Lim, Shichong Liu, Ellen Jackson, Nicole M. Aiello, Naomi B. Haas, Timothy R. Rebbeck, Alexander R. Judkins, Kyoung‐Jae Won, Lewis A. Chodosh, Benjamin A. García, Ben Z. Stanger, Michael D. Feldman, Ian A. Blair, Kathryn E. Wellen

    Published 2014
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  13. 13
    Critical Role of Histone Turnover in Neuronal Transcription and Plasticity

    Critical Role of Histone Turnover in Neuronal Transcription and Plasticity by Ian Maze, Wendy Wenderski, Kyung‐Min Noh, Rosemary C. Bagot, Nikos Tzavaras, Immanuel Purushothaman, Simon J. Elsässer, Yin Guo, Carolina Ionete, Yasmin L. Hurd, Carol A. Tamminga, Tobias Halene, Lorna A. Farrelly, Alexey A. Soshnev, Duancheng Wen, Shahin Rafii, Marc R. Birtwistle, Schahram Akbarian, Bruce A. Buchholz, Robert D. Blitzer, Eric J. Nestler, Zuo‐Fei Yuan, Benjamin A. Garcia, Li Shen, Henrik Molina, C. David Allis

    Published 2015
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  14. 14
    Human and mouse proteomics reveals the shared pathways in Alzheimer’s disease and delayed protein turnover in the amyloidome

    Human and mouse proteomics reveals the shared pathways in Alzheimer’s disease and delayed protein turnover in the amyloidome by Jay M. Yarbro, Xian Han, Abhijit Dasgupta, Ka Yang, Danting Liu, Him K. Shrestha, Masihuz Zaman, Zhen Wang, Kaiwen Yu, Dong Geun Lee, David Vanderwall, Mingming Niu, Huan Sun, Boer Xie, Ping-Chung Chen, Yun Jiao, Xue Zhang, Zhiping Wu, Surendhar Reddy Chepyala, Yingxue Fu, Yuxin Li, Zuo‐Fei Yuan, Xusheng Wang, Suresh Poudel, Barbora Vagnerova, Qianying He, Andrew Tang, Patrick T. Ronaldson, Rui Chang, Gang Yu, Yansheng Liu, Junmin Peng

    Published 2025
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  15. 15
    Alzheimer’s disease-associated U1 snRNP splicing dysfunction causes neuronal hyperexcitability and cognitive impairment

    Alzheimer’s disease-associated U1 snRNP splicing dysfunction causes neuronal hyperexcitability and cognitive impairment by Ping‐Chung Chen, Xian Han, Timothy I. Shaw, Yingxue Fu, Huan Sun, Mingming Niu, Zhen Wang, Yun Jiao, Brett J.W. Teubner, Donnie Eddins, Lauren N. Beloate, Bing Bai, Joseph Mertz, Yuxin Li, Ji‐Hoon Cho, Xusheng Wang, Zhiping Wu, Danting Liu, Suresh Poudel, Zuo‐Fei Yuan, Ariana Mancieri, Jonathan Low, Hyeong-Min Lee, Mary H. Patton, Laurie R. Earls, Elizabeth Stewart, Peter Vogel, Yawei Hui, Shibiao Wan, David A. Bennett, Geidy E. Serrano, Thomas G. Beach, Michael A. Dyer, Richard J. Smeyne, Tudor Moldoveanu, Taosheng Chen, Gang Wu, Stanislav S. Zakharenko, Gang Yu, Junmin Peng

    Published 2022
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  16. 16
    Histone H3.3 beyond cancer: Germline mutations in <i>Histone 3 Family 3A and 3B</i> cause a previously unidentified neurodegenerative disorder in 46 patients

    Histone H3.3 beyond cancer: Germline mutations in <i>Histone 3 Family 3A and 3B</i> cause a previously unidentified neurodegenerative disorder in 46 patients by Laura Bryant, Dong Li, Samuel G. Cox, Dylan M. Marchione, Evan F. Joiner, Khadija Wilson, Kevin A. Janssen, Pearl Lee, Michael March, Divya Nair, Elliott H. Sherr, Brieana Fregeau, Klaas J. Wierenga, Alexandrea Wadley, Grazia M.S. Mancini, Nina Powell‐Hamilton, Jiddeke van de Kamp, Theresa A. Grebe, John Dean, Alison Ross, Heather P. Crawford, Zöe Powis, Megan T. Cho, Marcia Willing, Linda Manwaring, Rachel Schot, Caroline Nava, Alexandra Afenjar, Davor Lessel, Matias Wagner, Thomas Klopstock, Juliane Winkelmann, Claudia B. Catarino, Kyle Retterer, Jane L. Schuette, Jeffrey W. Innis, Amy Pizzino, Sabine Lüttgen, Jonas Denecke, Tim M. Strom, Kristin G. Monaghan, Zuo‐Fei Yuan, Holly Dubbs, Renee Bend, Jennifer A. Lee, Michael J. Lyons, Julia Hoefele, Roman Günthner, Heiko Reutter, Boris Keren, Kelly Radtke, Omar Sherbini, Cameron Mrokse, Katherine L. Helbig, Sylvie Odent, Benjamin Cogné, Sandra Mercier, Stéphane Bézieau, Thomas Besnard, Sébastien Küry, Richard Redon, Karit Reinson, Monica H. Wojcik, Katrin Õunap, Pilvi Ilves, A. Micheil Innes, Kristin D. Kernohan, Gregory Costain, M. Stephen Meyn, David Chitayat, Elaine H. Zackai, Anna Lehman, Hilary Kitson, Martin G. Martin, Julián A. Martínez-Agosto, Stan F. Nelson, Christina G.S. Palmer, Jeanette C. Papp, Neil H. Parker, Janet S. Sinsheimer, Éric Vilain, Jijun Wan, Amanda J. Yoon, Allison Zheng, Elise Brimble, Giovanni Battista Ferrero, Francesca Clementina Radio, Diana Carli, Sabina Barresi, Alfredo Brusco, Marco Tartaglia, Jennifer Muncy Thomas, Luis A. Umaña, Marjan M. Weiss, Garrett Gotway, Kyra E. Stuurman, Michelle L. Thompson, Kirsty McWalter, Constance T. R. M. Stumpel, Servi J.C. Stevens

    Published 2020
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