Bilaketaren emaitzak - Zeynep Kalender Atak

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  1. 1
    i-cisTarget 2015 update: generalized cis-regulatory enrichment analysis in human, mouse and fly

    i-cisTarget 2015 update: generalized cis-regulatory enrichment analysis in human, mouse and fly nork Hana Imrichová, Gert Hulselmans, Zeynep Kalender Atak, Delphine Potier, Stein Aerts

    Argitaratua 2015
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  2. 2
    Mapping gene regulatory networks from single-cell omics data

    Mapping gene regulatory networks from single-cell omics data nork Mark Fiers, Liesbeth Minnoye, Sara Aibar, Carmen Bravo González‐Blas, Zeynep Kalender Atak, Stein Aerts

    Argitaratua 2017
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  3. 3
    Mutation analysis of the tyrosine phosphatase PTPN2 in Hodgkin's lymphoma and T-cell non-Hodgkin's lymphoma

    Mutation analysis of the tyrosine phosphatase PTPN2 in Hodgkin's lymphoma and T-cell non-Hodgkin's lymphoma nork M. Kleppe, Thomas Tousseyn, Eva Geissinger, Zeynep Kalender Atak, Stein Aerts, Andreas Rosenwald, Iwona Włodarska, Jan Cools

    Argitaratua 2011
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  4. 4
    Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic

    Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic nork Annelien Verfaillie, Dmitry Svetlichnyy, Hana Imrichová, Kristofer Davie, Mark Fiers, Zeynep Kalender Atak, Gert Hulselmans, Valerie Christiaens, Stein Aerts

    Argitaratua 2016
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  5. 5
    Yin Yang 1 sustains biosynthetic demands during brain development in a stage-specific manner

    Yin Yang 1 sustains biosynthetic demands during brain development in a stage-specific manner nork Luis Zurkirchen, Sandra Varum, Sonja Giger, Annika Klug, Jessica Häusel, Raphaël Bossart, Martina Zemke, Claudio Cantù, Zeynep Kalender Atak, Nicola Zamboni, Konrad Basler, Lukas Sommer

    Argitaratua 2019
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  6. 6
    Interpretation of allele-specific chromatin accessibility using cell state–aware deep learning

    Interpretation of allele-specific chromatin accessibility using cell state–aware deep learning nork Zeynep Kalender Atak, Ibrahim Ihsan Taskiran, Jonas Demeulemeester, Christopher Flerin, David Mauduit, Liesbeth Minnoye, Gert Hulselmans, Valerie Christiaens, Ghanem-Elias Ghanem, Jasper Wouters, Stein Aerts

    Argitaratua 2021
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  7. 7
    The Drosophila Homologue of the Amyloid Precursor Protein Is a Conserved Modulator of Wnt PCP Signaling

    The Drosophila Homologue of the Amyloid Precursor Protein Is a Conserved Modulator of Wnt PCP Signaling nork Alessia Soldano, Zeynep Okray, Pavlína Janovská, Kateřina Tmejová, Elodie Reynaud, Annelies Claeys, Jiekun Yan, Zeynep Kalender Atak, Bart De Strooper, Jean‐Maurice Dura, Vı́tězslav Bryja, Bassem A. Hassan

    Argitaratua 2013
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  8. 8
    iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections

    iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections nork Rekin’s Janky, Annelien Verfaillie, Hana Imrichová, Bram Van de Sande, Laura Standaert, Valerie Christiaens, Gert Hulselmans, Koen Herten, Marina Naval-Sánchez, Delphine Potier, Dmitry Svetlichnyy, Zeynep Kalender Atak, Mark Fiers, Jean‐Christophe Marine, Stein Aerts

    Argitaratua 2014
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  9. 9
    SCENIC: single-cell regulatory network inference and clustering

    SCENIC: single-cell regulatory network inference and clustering nork Sara Aibar, Carmen Bravo González‐Blas, Thomas Moerman, Vân Anh Huynh‐Thu, Hana Imrichová, Gert Hulselmans, Florian Rambow, Jean‐Christophe Marine, Pierre Geurts, Jan Aerts, Joost van den Oord, Zeynep Kalender Atak, Jasper Wouters, Stein Aerts

    Argitaratua 2017
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  10. 10
    Comprehensive Analysis of Transcriptome Variation Uncovers Known and Novel Driver Events in T-Cell Acute Lymphoblastic Leukemia

    Comprehensive Analysis of Transcriptome Variation Uncovers Known and Novel Driver Events in T-Cell Acute Lymphoblastic Leukemia nork Zeynep Kalender Atak, Valentina Gianfelici, Gert Hulselmans, Kim De Keersmaecker, Arun George Devasia, Ellen Geerdens, Nicole Mentens, Sabina Chiaretti, Kaat Durinck, Anne Uyttebroeck, Peter Vandenberghe, Iwona Włodarska, Jacqueline Cloos, Robin Foà, Frank Speleman, Jan Cools, Stein Aerts

    Argitaratua 2013
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  11. 11
    High Accuracy Mutation Detection in Leukemia on a Selected Panel of Cancer Genes

    High Accuracy Mutation Detection in Leukemia on a Selected Panel of Cancer Genes nork Zeynep Kalender Atak, Kim De Keersmaecker, Valentina Gianfelici, Ellen Geerdens, Roel Vandepoel, Daphnie Pauwels, Michaël Porcu, Idoya Lahortiga, Vanessa Brys, Wilhelm G. Dirks, Hilmar Quentmeier, Jacqueline Cloos, Harry Cuppens, Anne Uyttebroeck, Peter Vandenberghe, Jan Cools, Stein Aerts

    Argitaratua 2012
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  12. 12
    Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state

    Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state nork Annelien Verfaillie, Hana Imrichová, Zeynep Kalender Atak, Michael Dewaele, Florian Rambow, Gert Hulselmans, Valerie Christiaens, Dmitry Svetlichnyy, Flavie Luciani, Laura Van den Mooter, Sofie Claerhout, Mark Fiers, Fabrice Journé, Ghanem-Elias Ghanem, Carl Herrmann, Georg Halder, Jean‐Christophe Marine, Stein Aerts

    Argitaratua 2015
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  13. 13
    Yin Yang 1 Orchestrates a Metabolic Program Required for Both Neural Crest Development and Melanoma Formation

    Yin Yang 1 Orchestrates a Metabolic Program Required for Both Neural Crest Development and Melanoma Formation nork Sandra Varum, Arianna Baggiolini, Luis Zurkirchen, Zeynep Kalender Atak, Claudio Cantù, Elisa Marzorati, Raphaël Bossart, Jasper Wouters, Jessica Häusel, Eylül Tuncer, Daniel Zingg, Dominiek Veen, Nessy John, Marcel Balz, Mitchell P. Levesque, Konrad Basler, Stein Aerts, Nicola Zamboni, Reinhard Dummer, Lukas Sommer

    Argitaratua 2019
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  14. 14
    Robust gene expression programs underlie recurrent cell states and phenotype switching in melanoma

    Robust gene expression programs underlie recurrent cell states and phenotype switching in melanoma nork Jasper Wouters, Zeynep Kalender Atak, Liesbeth Minnoye, Katina I. Spanier, Maxime De Waegeneer, Carmen Bravo González‐Blas, David Mauduit, Kristofer Davie, Gert Hulselmans, Ahmad Najem, Michael Dewaele, Dennis Pedri, Florian Rambow, Samira Makhzami, Valerie Christiaens, Frederik Ceyssens, Ghanem Ghanem, Jean‐Christophe Marine, Suresh Poovathingal, Stein Aerts

    Argitaratua 2020
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  15. 15
    14q32 rearrangements deregulating <i>BCL11B </i>mark a distinct subgroup of T and myeloid immature acute leukemia

    14q32 rearrangements deregulating <i>BCL11B </i>mark a distinct subgroup of T and myeloid immature acute leukemia nork Danika Di Giacomo, Roberta La Starza, Paolo Gorello, Fabrizia Pellanera, Zeynep Kalender Atak, Kim De Keersmaecker, Valentina Pierini, Christine J. Harrison, Silvia Arniani, Martina Moretti, Nicoletta Testoni, Giovanna De Santis, Giovanni Roti, Caterina Matteucci, Renato Bassan, Peter Vandenberghe, Stein Aerts, Jan Cools, Beat Bornhäuser, Jean‐Pierre Bourquin, Rocco Piazza, Cristina Mecucci

    Argitaratua 2021
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  16. 16
    Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia

    Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia nork Kim De Keersmaecker, Zeynep Kalender Atak, Ning Li, Carmen Vicente, Stephanie Patchett, Tiziana Girardi, Valentina Gianfelici, Ellen Geerdens, Emmanuelle Clappier, Michaël Porcu, Idoya Lahortiga, Rossella Lucà, Jiekun Yan, Gert Hulselmans, Hilde Vranckx, Roel Vandepoel, Bram Sweron, Kris Jacobs, Nicole Mentens, Iwona Włodarska, Barbara Cauwelier, Jacqueline Cloos, Jean Soulier, Anne Uyttebroeck, Claudia Bagni, Bassem A. Hassan, Peter Vandenberghe, Alan M. Johnson, Stein Aerts, Jan Cools

    Argitaratua 2012
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