Ngā hua rapu - Yoshiki Vázquez‐Baeza

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  1. 1
    EMPeror: a tool for visualizing high-throughput microbial community data

    EMPeror: a tool for visualizing high-throughput microbial community data mā Yoshiki Vázquez‐Baeza, Meg Pirrung, Antonio González, Rob Knight

    I whakaputaina 2013
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  2. 2
    Avoiding Pandemic Fears in the Subway and Conquering the Platypus

    Avoiding Pandemic Fears in the Subway and Conquering the Platypus mā Antonio González, Yoshiki Vázquez‐Baeza, James Pettengill, Andrea Ottesen, Daniel McDonald, Rob Knight

    I whakaputaina 2016
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Carta
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  3. 3
    Uniform Manifold Approximation and Projection (UMAP) Reveals Composite Patterns and Resolves Visualization Artifacts in Microbiome Data

    Uniform Manifold Approximation and Projection (UMAP) Reveals Composite Patterns and Resolves Visualization Artifacts in Microbiome Data mā George Armstrong, Cameron Martino, Gibraan Rahman, Antonio González, Yoshiki Vázquez‐Baeza, Gal Mishne, Rob Knight

    I whakaputaina 2021
    Whiwhi kuputuhi katoa
    Artigo
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  4. 4
    Tiny microbes, enormous impacts: what matters in gut microbiome studies?

    Tiny microbes, enormous impacts: what matters in gut microbiome studies? mā Justine W. Debelius, Se Jin Song, Yoshiki Vázquez‐Baeza, Zhenjiang Zech Xu, Antonio González, Rob Knight

    I whakaputaina 2016
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Revisão
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  5. 5
    Gut microbiome in Schizophrenia: Altered functional pathways related to immune modulation and atherosclerotic risk

    Gut microbiome in Schizophrenia: Altered functional pathways related to immune modulation and atherosclerotic risk mā Tanya T. Nguyen, Tomasz Kościółek, Rebecca Daly, Yoshiki Vázquez‐Baeza, Austin D. Swafford, Rob Knight, Dilip V. Jeste

    I whakaputaina 2020
    Whiwhi kuputuhi katoa
    Artigo
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  6. 6
    Meta-analyses of studies of the human microbiota

    Meta-analyses of studies of the human microbiota mā Catherine Lozupone, Jesse Stombaugh, Antonio González, Gail Ackermann, Doug Wendel, Yoshiki Vázquez‐Baeza, Janet Jansson, Jeffrey I. Gordon, Rob Knight

    I whakaputaina 2013
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Revisão
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  7. 7
    Striped UniFrac: enabling microbiome analysis at unprecedented scale

    Striped UniFrac: enabling microbiome analysis at unprecedented scale mā Daniel McDonald, Yoshiki Vázquez‐Baeza, David Koslicki, Jason McClelland, Nicolai Reeve, Zhenjiang Zech Xu, Antonio González, Rob Knight

    I whakaputaina 2018
    Whiwhi kuputuhi katoa
    Carta
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  8. 8
    Evaluating Metagenomic Prediction of the Metaproteome in a 4.5-Year Study of a Patient with Crohn's Disease

    Evaluating Metagenomic Prediction of the Metaproteome in a 4.5-Year Study of a Patient with Crohn's Disease mā Robert H. Mills, Yoshiki Vázquez‐Baeza, Qiyun Zhu, Lingjing Jiang, James Gaffney, Greg Humphrey, Larry Smarr, Rob Knight, David J. Gonzalez

    I whakaputaina 2019
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  9. 9
    Effects of library size variance, sparsity, and compositionality on the analysis of microbiome data

    Effects of library size variance, sparsity, and compositionality on the analysis of microbiome data mā Sophie Weiss, Zhenjiang Zech Xu, Amnon Amir, Shyamal Peddada, Kyle Bittinger, Antonio González, Catherine Lozupone, Jesse Zaneveld, Yoshiki Vázquez‐Baeza, Amanda Birmingham, Rob Knight

    I whakaputaina 2015
    Whiwhi kuputuhi katoa
    Pré-impressão
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  10. 10
    Impacts of the Human Gut Microbiome on Therapeutics

    Impacts of the Human Gut Microbiome on Therapeutics mā Yoshiki Vázquez‐Baeza, Chris Callewaert, Justine W. Debelius, Embriette R. Hyde, Clarisse Marotz, James T. Morton, Austin D. Swafford, Alison Vrbanac, Pieter C. Dorrestein, Rob Knight

    I whakaputaina 2017
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Revisão
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  11. 11
    Challenges in benchmarking metagenomic profilers

    Challenges in benchmarking metagenomic profilers mā Zheng Sun, Shi Huang, Meng Zhang, Qiyun Zhu, Niina Haiminen, Anna Paola Carrieri, Yoshiki Vázquez‐Baeza, Laxmi Parida, Ho‐Cheol Kim, Rob Knight, Yang‐Yu Liu

    I whakaputaina 2021
    Whiwhi kuputuhi katoa
    Artigo
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  12. 12
    Normalization and microbial differential abundance strategies depend upon data characteristics

    Normalization and microbial differential abundance strategies depend upon data characteristics mā Sophie Weiss, Zhenjiang Zech Xu, Shyamal D. Peddada, Amnon Amir, Kyle Bittinger, Antonio González, Catherine Lozupone, Jesse Zaneveld, Yoshiki Vázquez‐Baeza, Amanda Birmingham, Embriette R. Hyde, Rob Knight

    I whakaputaina 2017
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  13. 13
    Context-aware dimensionality reduction deconvolutes gut microbial community dynamics

    Context-aware dimensionality reduction deconvolutes gut microbial community dynamics mā Cameron Martino, Liat Shenhav, Clarisse Marotz, George Armstrong, Daniel McDonald, Yoshiki Vázquez‐Baeza, James T. Morton, Lingjing Jiang, María Gloria Domínguez-Bello, Austin D. Swafford, Eran Halperin, Rob Knight

    I whakaputaina 2020
    Whiwhi kuputuhi katoa
    Artigo
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  14. 14
    Dynamic changes in short- and long-term bacterial composition following fecal microbiota transplantation for recurrent Clostridium difficile infection

    Dynamic changes in short- and long-term bacterial composition following fecal microbiota transplantation for recurrent Clostridium difficile infection mā Alexa R. Weingarden, Antonio González Ariza, Yoshiki Vázquez‐Baeza, Sophie Weiss, Gregory Humphry, Donna Berg-Lyons, Dan Knights, Tatsuya Unno, Aleh Bobr, Johnthomas Kang, Alexander Khoruts, Rob Knight, Michael J. Sadowsky

    I whakaputaina 2015
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  15. 15
    Temporal variability is a personalized feature of the human microbiome

    Temporal variability is a personalized feature of the human microbiome mā Gilberto E. Flores, J. Gregory Caporaso, Jessica B. Henley, Jai Ram Rideout, Daniel Domogala, John Chase, Jonathan W. Leff, Yoshiki Vázquez‐Baeza, Antonio González, Rob Knight, Robert R. Dunn, Noah Fierer

    I whakaputaina 2014
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  16. 16
    Microbiome 101: Studying, Analyzing, and Interpreting Gut Microbiome Data for Clinicians

    Microbiome 101: Studying, Analyzing, and Interpreting Gut Microbiome Data for Clinicians mā Celeste Allaband, Daniel McDonald, Yoshiki Vázquez‐Baeza, Jeremiah J. Minich, Anupriya Tripathi, David A. Brenner, Rohit Loomba, Larry Smarr, William J. Sandborn, Bernd Schnabl, Pieter C. Dorrestein, Amir Zarrinpar, Rob Knight

    I whakaputaina 2018
    Whiwhi kuputuhi katoa
    Revisão
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  17. 17
    QIIME 2 Enables Comprehensive End‐to‐End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data

    QIIME 2 Enables Comprehensive End‐to‐End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data mā Mehrbod Estaki, Lingjing Jiang, Nicholas A. Bokulich, Daniel McDonald, Antonio González, Tomasz Kościółek, Cameron Martino, Qiyun Zhu, Amanda Birmingham, Yoshiki Vázquez‐Baeza, Matthew R. Dillon, Evan Bolyen, J. Gregory Caporaso, Rob Knight

    I whakaputaina 2020
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  18. 18
    Compositional and genetic alterations in Graves’ disease gut microbiome reveal specific diagnostic biomarkers

    Compositional and genetic alterations in Graves’ disease gut microbiome reveal specific diagnostic biomarkers mā Qiyun Zhu, Qiangchuan Hou, Shi Huang, Qianying Ou, Dongxue Huo, Yoshiki Vázquez‐Baeza, Chaoping Cen, Victor Cantu, Mehrbod Estaki, Haibo Chang, Pedro Belda‐Ferre, Ho‐Cheol Kim, Kaining Chen, Rob Knight, Jiachao Zhang

    I whakaputaina 2021
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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  19. 19
    Dynamics of the human gut microbiome in inflammatory bowel disease

    Dynamics of the human gut microbiome in inflammatory bowel disease mā Jonas Halfvarson, Colin Brislawn, Regina Lamendella, Yoshiki Vázquez‐Baeza, William A. Walters, Lisa Bramer, Mauro D’Amato, Ferdinando Bonfiglio, Daniel McDonald, Antonio González, Erin E. McClure, Mitchell Dunklebarger, Rob Knight, Janet Jansson

    I whakaputaina 2017
    Whiwhi kuputuhi katoa
    Artigo
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  20. 20
    Creating a 3D microbial and chemical snapshot of a human habitat

    Creating a 3D microbial and chemical snapshot of a human habitat mā Clifford A. Kapono, James T. Morton, Amina Bouslimani, Alexey V. Melnik, Kayla Orlinsky, Tal Luzzatto‐Knaan, Neha Garg, Yoshiki Vázquez‐Baeza, Ivan Protsyuk, Stefan Janssen, Qiyun Zhu, Theodore Alexandrov, Larry Smarr, Rob Knight, Pieter C. Dorrestein

    I whakaputaina 2018
    Whiwhi kuputuhi katoa Whiwhi kuputuhi katoa
    Artigo
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