檢索結果 - Yakir Reshef

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  1. 1
    Sequential regulatory activity prediction across chromosomes with convolutional neural networks

    Sequential regulatory activity prediction across chromosomes with convolutional neural networks 由 David R. Kelley, Yakir Reshef, Maxwell L. Bileschi, David Belanger, Cory Y. McLean, Jasper Snoek

    出版 2018
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  2. 2
    Co-varying neighborhood analysis identifies cell populations associated with phenotypes of interest from single-cell transcriptomics

    Co-varying neighborhood analysis identifies cell populations associated with phenotypes of interest from single-cell transcriptomics 由 Yakir Reshef, Laurie Rumker, Joyce B. Kang, Aparna Nathan, Ilya Korsunsky, Samira Asgari, Megan Murray, D. Branch Moody, Soumya Raychaudhuri

    出版 2021
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  3. 3
    Estimating cross‐population genetic correlations of causal effect sizes

    Estimating cross‐population genetic correlations of causal effect sizes 由 Kevin Galinsky, Yakir Reshef, Hilary K. Finucane, Po‐Ru Loh, Noah Zaitlen, Nick J. Patterson, Brielin C. Brown, Alkes L. Price

    出版 2018
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  4. 4
    Reference-based phasing using the Haplotype Reference Consortium panel

    Reference-based phasing using the Haplotype Reference Consortium panel 由 Po‐Ru Loh, Petr Danecek, Pier Francesco Palamara, Christian Fuchsberger, Yakir Reshef, Hilary K. Finucane, Sebastian Schoenherr, Lukas Forer, Shane McCarthy, Gonçalo R. Abecasis, Richard Durbin, Alkes L. Price

    出版 2016
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  5. 5
    Reference-based phasing using the Haplotype Reference Consortium panel

    Reference-based phasing using the Haplotype Reference Consortium panel 由 Po‐Ru Loh, Petr Danecek, Pier Francesco Palamara, Christian Fuchsberger, Yakir Reshef, Hilary K. Finucane, Sebastian Schoenherr, Lukas Forer, Shane McCarthy, Gonçalo R. Abecasis, Richard Durbin, Alkes L. Price

    出版 2016
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  6. 6
    Insights into clonal haematopoiesis from 8,342 mosaic chromosomal alterations

    Insights into clonal haematopoiesis from 8,342 mosaic chromosomal alterations 由 Po‐Ru Loh, Giulio Genovese, Robert E. Handsaker, Hilary K. Finucane, Yakir Reshef, Pier Francesco Palamara, Brenda M. Birmann, Michael E. Talkowski, Samuel F. Bakhoum, Steven A. McCarroll, Alkes L. Price

    出版 2018
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  7. 7
    Leveraging molecular quantitative trait loci to understand the genetic architecture of diseases and complex traits

    Leveraging molecular quantitative trait loci to understand the genetic architecture of diseases and complex traits 由 Farhad Hormozdiari, Steven Gazal, Bryce van de Geijn, Hilary K. Finucane, Chelsea J.‐T. Ju, Po‐Ru Loh, Armin Schoech, Yakir Reshef, Xuanyao Liu, Luke J. O’Connor, Alexander Gusev, Eleazar Eskin, Alkes L. Price

    出版 2018
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  8. 8
    Functionally informed fine-mapping and polygenic localization of complex trait heritability

    Functionally informed fine-mapping and polygenic localization of complex trait heritability 由 Omer Weissbrod, Farhad Hormozdiari, Christian Benner, Ran Cui, Jacob C. Ulirsch, Steven Gazal, Armin Schoech, Bryce van de Geijn, Yakir Reshef, Carla Márquez‐Luna, Luke J. O’Connor, Matti Pirinen, Hilary K. Finucane, Alkes L. Price

    出版 2020
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  9. 9
    Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights

    Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights 由 Alexander Gusev, Nicholas Mancuso, Hyejung Won, Maria Kousi, Hilary K. Finucane, Yakir Reshef, Lingyun Song, Alexias Safi, Steven A. McCarroll, Benjamin M. Neale, Roel A. Ophoff, Michael O’Donovan, Gregory E. Crawford, Daniel H. Geschwind, Nicholas Katsanis, Patrick F. Sullivan, Bogdan Paşaniuc, Alkes L. Price

    出版 2018
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  10. 10
    Detecting genome-wide directional effects of transcription factor binding on polygenic disease risk

    Detecting genome-wide directional effects of transcription factor binding on polygenic disease risk 由 Yakir Reshef, Hilary K. Finucane, David R. Kelley, Alexander Gusev, Dylan Kotliar, Jacob C. Ulirsch, Farhad Hormozdiari, Joseph Nasser, Luke J. O’Connor, Bryce van de Geijn, Po‐Ru Loh, Sharon R. Grossman, Gaurav Bhatia, Steven Gazal, Pier Francesco Palamara, Luca Pinello, Nick Patterson, Ryan P. Adams, Alkes L. Price

    出版 2018
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  11. 11
    Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types

    Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types 由 Hilary K. Finucane, Yakir Reshef, Verneri Anttila, Kamil Slowikowski, Alexander Gusev, Andrea Byrnes, Steven Gazal, Po‐Ru Loh, Caleb A. Lareau, Noam Shoresh, Giulio Genovese, Arpiar Saunders, Evan Z. Macosko, Samuela Pollack, John R. B. Perry, Jason D. Buenrostro, B Bernstein, Soumya Raychaudhuri, Steven A. McCarroll, Benjamin M. Neale, Alkes L. Price

    出版 2018
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  12. 12
    Partitioning heritability by functional annotation using genome-wide association summary statistics

    Partitioning heritability by functional annotation using genome-wide association summary statistics 由 Hilary K. Finucane, Brendan Bulik‐Sullivan, Alexander Gusev, Gosia Trynka, Yakir Reshef, Po‐Ru Loh, Verneri Anttila, Han Xu, Chongzhi Zang, Kyle Kai-How Farh, Stephan Ripke, Felix R. Day, Shaun Purcell, Eli A. Stahl, Sara Lindström, John R. B. Perry, Yukinori Okada, Soumya Raychaudhuri, Mark J. Daly, Hon‐Cheong So, Benjamin M. Neale, Alkes L. Price

    出版 2015
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  13. 13
    Cellular deconstruction of inflamed synovium defines diverse inflammatory phenotypes in rheumatoid arthritis

    Cellular deconstruction of inflamed synovium defines diverse inflammatory phenotypes in rheumatoid arthritis 由 Fan Zhang, A. Helena Jonsson, Aparna Nathan, Kevin Wei, Nghia Millard, Qian Xiao, María Gutiérrez‐Arcelus, William Apruzzese, Gerald F. Watts, Dana Weisenfeld, Joyce B. Kang, Laurie Rumker, Joseph Mears, Kamil Slowikowski, Kathryn Weinand, Dana E. Orange, Javier Rangel‐Moreno, Laura Geraldino‐Pardilla, Kevin D. Deane, Darren Tabechian, Arnold Ceponis, Gary S. Firestein, Mark Maybury, Ilfita Sahbudin, Ami Ben‐Artzi, Arthur M. Mandelin, Alessandra Nerviani, Felice Rivellese, Costantino Pitzalis, Laura B. Hughes, Diane Horowitz, Edward F. DiCarlo, Ellen M. Gravallese, Brendan F. Boyce, Larry W. Moreland, Susan M. Goodman, Harris Perlman, V. Michael Holers, Katherine P. Liao, Andrew Filer, Vivian P. Bykerk, Deepak A. Rao, Laura T. Donlin, Jennifer H. Anolik, Michael B. Brenner, Soumya Raychaudhuri, Jennifer S. Albrecht, Jennifer L. Barnas, Joan M. Bathon, David L. Boyle, S. Louis Bridges, Debbie Campbell, Hayley L. Carr, Adam Chicoine, Andrew Cordle, Michelle Curtis, Patrick Dunn, Lindsy Forbess, Peter K. Gregersen, Joel M. Guthridge, Lionel B. Ivashkiv, Kazuyoshi Ishigaki, Judith A. James, Gregory Keras, Ilya Korsunsky, Amit Lakhanpal, Eddie A. James, Zhihan J. Li, Yuhong Li, Andrew McDavid, Nida Meednu, Ian Mantel, Mandy J. McGeachy, Karim Raza, Yakir Reshef, Christopher T. Ritchlin, William H. Robinson, Saori Sakaue, Jennifer Seifert, Melanie H. Smith, Dagmar Scheel‐Toellner, Paul J. Utz, Michael H. Weisman, Zhu Zhu

    出版 2022
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  14. 14
    The chromatin landscape of pathogenic transcriptional cell states in rheumatoid arthritis

    The chromatin landscape of pathogenic transcriptional cell states in rheumatoid arthritis 由 Kathryn Weinand, Saori Sakaue, Aparna Nathan, A. Helena Jonsson, Fan Zhang, Gerald F. Watts, Majd Al Suqri, Zhu Zhu, Jennifer S. Albrecht, William Apruzzese, Nirmal K. Banda, Jennifer L. Barnas, Joan M. Bathon, Ami Ben‐Artzi, Brendan F. Boyce, David L. Boyle, S. Louis Bridges, Vivian P. Bykerk, Debbie Campbell, Hayley L. Carr, Arnold Ceponis, Adam Chicoine, Andrew Cordle, Michelle Curtis, Kevin D. Deane, Edward F. DiCarlo, Patrick Dunn, Andrew Filer, Gary S. Firestein, Lindsy Forbess, Laura Geraldino‐Pardilla, Susan M. Goodman, Ellen M. Gravallese, Peter K. Gregersen, Joel M. Guthridge, María Gutiérrez‐Arcelus, Siddarth Gurajala, V. Michael Holers, Diane Horowitz, Laura B. Hughes, Kazuyoshi Ishigaki, Lionel B. Ivashkiv, Judith A. James, Joyce B. Kang, Gregory Keras, Ilya Korsunsky, Amit Lakhanpal, James A. Lederer, Zhihan J. Li, Yuhong Li, Katherine P. Liao, Arthur M. Mandelin, Ian Mantel, Mark Maybury, Andrew McDavid, Joseph Mears, Nida Meednu, Nghia Millard, Larry W. Moreland, Alessandra Nerviani, Dana E. Orange, Harris Perlman, Costantino Pitzalis, Javier Rangel‐Moreno, Karim Raza, Yakir Reshef, Christopher T. Ritchlin, Felice Rivellese, William H. Robinson, Laurie Rumker, Ilfita Sahbudin, Dagmar Scheel‐Toellner, Jennifer Seifert, Kamil Slowikowski, Melanie H. Smith, Darren Tabechian, Paul J. Utz, Dana Weisenfeld, Michael H. Weisman, Qian Xiao, Deepak A. Rao, Jennifer H. Anolik, Michael B. Brenner, Laura T. Donlin, Kevin Wei, Soumya Raychaudhuri

    出版 2024
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  15. 15
    Tissue-specific enhancer–gene maps from multimodal single-cell data identify causal disease alleles

    Tissue-specific enhancer–gene maps from multimodal single-cell data identify causal disease alleles 由 Saori Sakaue, Kathryn Weinand, Shakson Isaac, Kushal K. Dey, Karthik A. Jagadeesh, Masahiro Kanai, Gerald F. Watts, Zhu Zhu, Jennifer S. Albrecht, Jennifer H. Anolik, William Apruzzese, Nirmal K. Banda, Jennifer L. Barnas, Joan M. Bathon, Ami Ben‐Artzi, Brendan F. Boyce, David L. Boyle, S. Louis Bridges, Vivian P. Bykerk, Debbie Campbell, Hayley L. Carr, Arnold Ceponis, Adam Chicoine, Andrew Cordle, Michelle Curtis, Kevin D. Deane, Edward F. DiCarlo, Patrick Dunn, Andrew Filer, Gary S. Firestein, Lindsy Forbess, Laura Geraldino‐Pardilla, Susan M. Goodman, Ellen M. Gravallese, Peter K. Gregersen, Joel M. Guthridge, María Gutiérrez‐Arcelus, Siddarth Gurajala, V. Michael Holers, Diane Horowitz, Laura B. Hughes, Kazuyoshi Ishigaki, Lionel B. Ivashkiv, Judith A. James, A. Helena Jonsson, Joyce B. Kang, Gregory Keras, Ilya Korsunsky, Amit Lakhanpal, James A. Lederer, Zhihan J. Li, Yuhong Li, Katherine P. Liao, Arthur M. Mandelin, Ian Mantel, Mark Maybury, Joseph Mears, Nida Meednu, Nghia Millard, Larry W. Moreland, Aparna Nathan, Alessandra Nerviani, Dana E. Orange, Harris Perlman, Costantino Pitzalis, Javier Rangel‐Moreno, Deepak A. Rao, Karim Raza, Yakir Reshef, Christopher T. Ritchlin, Felice Rivellese, William H. Robinson, Laurie Rumker, Ilfita Sahbudin, Jennifer Seifert, Kamil Slowikowski, Melanie H. Smith, Darren Tabechian, Dagmar Scheel‐Toellner, Paul J. Utz, Dana Weisenfeld, Michael H. Weisman, Qian Xiao, Fan Zhang, Michael B. Brenner, Andrew McDavid, Laura T. Donlin, Kevin Wei, Alkes L. Price, Soumya Raychaudhuri

    出版 2024
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  16. 16
    Clonal associations between lymphocyte subsets and functional states in rheumatoid arthritis synovium

    Clonal associations between lymphocyte subsets and functional states in rheumatoid arthritis synovium 由 Garrett S. Dunlap, Aaron B. Wagner, Nida Meednu, Ruoqiao Huiyi Wang, Fan Zhang, Jabea Cyril Ekabe, A. Helena Jonsson, Kevin Wei, Saori Sakaue, Aparna Nathan, Jennifer S. Albrecht, William Apruzzese, Jennifer L. Barnas, Joan M. Bathon, Ami Ben‐Artzi, Brendan F. Boyce, S. Louis Bridges, Debbie Campbell, Hayley L. Carr, Arnold Ceponis, Adam Chicoine, Andrew Cordle, Michelle Curtis, Kevin D. Deane, Edward F. DiCarlo, Patrick Dunn, Lindsy Forbess, Laura Geraldino‐Pardilla, Ellen M. Gravallese, Peter K. Gregersen, Joel M. Guthridge, Diane Horowitz, Laura B. Hughes, Kazuyoshi Ishigaki, Lionel B. Ivashkiv, Judith A. James, Joyce B. Kang, Gregory Keras, Ilya Korsunsky, Amit Lakhanpal, Eddie A. James, Yuhong Li, Zhihan J. Li, Katherine P. Liao, Holden Maecker, Arthur M. Mandelin, Ian Mantel, Mark Maybury, Mandy J. McGeachy, Joseph Mears, Alessandra Nerviani, Dana E. Orange, Harris Perlman, Javier Rangel‐Moreno, Karim Raza, Yakir Reshef, Christopher T. Ritchlin, Felice Rivellese, William H. Robinson, Laurie Rumker, Ilfita Sahbudin, Karen Salomon-Escoto, Dagmar Scheel‐Toellner, Jennifer Seifert, Anvita Singaraju, Melanie H. Smith, Paul J. Utz, Kathryn Weinand, Dana Weisenfeld, Michael H. Weisman, Qian Xiao, Zhu Zhu, Vivian P. Bykerk, Laura T. Donlin, Susan M. Goodman, Gary S. Firestein, David L. Boyle, V. Michael Holers, Larry W. Moreland, Darren Tabechian, Costantino Pitzalis, Andrew Filer, Soumya Raychaudhuri, Michael B. Brenner, Juilee Thakar, Andrew McDavid, Deepak A. Rao, Jennifer H. Anolik

    出版 2024
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  17. 17
    Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution

    Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution 由 Joyce B. Kang, Amber Shen, Saisriram Gurajala, Aparna Nathan, Laurie Rumker, Vitor R. C. Aguiar, Cristian Valencia, Kaitlyn A. Lagattuta, Fan Zhang, A. Helena Jonsson, Seyhan Yazar, José Alquicira‐Hernandez, Hamed Khalili, Ashwin N. Ananthakrishnan, Karthik A. Jagadeesh, Kushal K. Dey, Jennifer S. Albrecht, William Apruzzese, Nirmal K. Banda, Jennifer L. Barnas, Joan M. Bathon, Ami Ben‐Artzi, Brendan F. Boyce, David L. Boyle, S. Louis Bridges, Vivian P. Bykerk, Debbie Campbell, Hayley L. Carr, Arnold Ceponis, Adam Chicoine, Andrew Cordle, Michelle Curtis, Kevin D. Deane, Edward F. DiCarlo, Patrick Dunn, Andrew Filer, Gary S. Firestein, Lindsy Forbess, Laura Geraldino‐Pardilla, Susan M. Goodman, Ellen M. Gravallese, Peter K. Gregersen, Joel M. Guthridge, V. Michael Holers, Diane Horowitz, Laura B. Hughes, Kazuyoshi Ishigaki, Lionel B. Ivashkiv, Judith A. James, Gregory Keras, Ilya Korsunsky, Amit Lakhanpal, James A. Lederer, Myles Lewis, Zhihan J. Li, Yuhong Li, Katherine P. Liao, Arthur M. Mandelin, Ian Mantel, Kathryne E. Marks, Mark Maybury, Andrew McDavid, Mandy J. McGeachy, Joseph Mears, Nida Meednu, Nghia Millard, Larry W. Moreland, Saba Nayar, Alessandra Nerviani, Dana E. Orange, Harris Perlman, Costantino Pitzalis, Javier Rangel‐Moreno, Karim Raza, Yakir Reshef, Christopher T. Ritchlin, Felice Rivellese, William H. Robinson, Ilfita Sahbudin, Anvita Singaraju, Jennifer Seifert, Kamil Slowikowski, Melanie H. Smith, Darren Tabechian, Dagmar Scheel‐Toellner, Paul J. Utz, Gerald F. Watts, Kevin Wei, Kathryn Weinand, Dana Weisenfeld, Michael H. Weisman, Aaron Wyse, Qian Xiao, Zhu Zhu, Mark J. Daly, Ramnik J. Xavier, Laura T. Donlin, Jennifer H. Anolik, Joseph E. Powell, Deepak A. Rao

    出版 2023
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