Search Results - Xianjun Dong

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  1. 1
    The Correlation Between Histone Modifications and Gene Expression

    The Correlation Between Histone Modifications and Gene Expression by Xianjun Dong, Zhiping Weng

    Published 2013
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    Editorial
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  2. 2
    Biomarker identification for Alzheimer’s disease through integration of comprehensive Mendelian randomization and proteomics data

    Biomarker identification for Alzheimer’s disease through integration of comprehensive Mendelian randomization and proteomics data by Hui Zhan, Davis Cammann, Jeffrey L. Cummings, Xianjun Dong, Jingchun Chen

    Published 2025
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    Artigo
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  3. 3
    A pipeline for RNA-seq based eQTL analysis with automated quality control procedures

    A pipeline for RNA-seq based eQTL analysis with automated quality control procedures by Tao Wang, Yongzhuang Liu, Junpeng Ruan, Xianjun Dong, Yadong Wang, Jiajie Peng

    Published 2021
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    Artigo
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  4. 4
    The Role of H3K4me3 in Transcriptional Regulation Is Altered in Huntington’s Disease

    The Role of H3K4me3 in Transcriptional Regulation Is Altered in Huntington’s Disease by Xianjun Dong, Junko Tsuji, Adam Labadorf, Panos Roussos, Jiang‐Fan Chen, Richard H. Myers, Schahram Akbarian, Zhiping Weng

    Published 2015
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    Artigo
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  5. 5
    Transcriptional features of genomic regulatory blocks

    Transcriptional features of genomic regulatory blocks by Altuna Akalin, David Fredman, Erik Arner, Xianjun Dong, Jan Christian Bryne, Harukazu Suzuki, Carsten O. Daub, Yoshihide Hayashizaki, Boris Lenhard

    Published 2009
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    Artigo
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  6. 6
    WebCSEA: web-based cell-type-specific enrichment analysis of genes

    WebCSEA: web-based cell-type-specific enrichment analysis of genes by Yulin Dai, Ruifeng Hu, Andi Liu, Kyung Serk Cho, Astrid M. Manuel, Xiaoyang Li, Xianjun Dong, Peilin Jia, Zhongming Zhao

    Published 2022
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    Artigo
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  7. 7
    Modeling gene expression using chromatin features in various cellular contexts

    Modeling gene expression using chromatin features in various cellular contexts by Xianjun Dong, Melissa C. Greven, Anshul Kundaje, Sarah Djebali, James Brown, Chao Cheng, T Gingeras, Mark Gerstein, Roderic Guigó, Ewan Birney, Zhiping Weng

    Published 2012
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    Artigo
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  8. 8
    Mbd3/NURD Complex Regulates Expression of 5-Hydroxymethylcytosine Marked Genes in Embryonic Stem Cells

    Mbd3/NURD Complex Regulates Expression of 5-Hydroxymethylcytosine Marked Genes in Embryonic Stem Cells by Özlem Yıldırım, Ruowang Li, Jui‐Hung Hung, Poshen B. Chen, Xianjun Dong, Ly-Sha Ee, Zhiping Weng, Oliver J. Rando, Thomas G. Fazzio

    Published 2011
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    Artigo
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  9. 9
    The genetic source tracking of human urinary exosomes

    The genetic source tracking of human urinary exosomes by Qingfu Zhu, Liming Cheng, Chunyu Deng, Liu Huang, Jiaoyuan Li, Yong Wang, Meng Li, Qinsi Yang, Xianjun Dong, Jianzhong Su, Luke P. Lee, Fei Liu

    Published 2021
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  10. 10
    Circular RNAs in the human brain are tailored to neuron identity and neuropsychiatric disease

    Circular RNAs in the human brain are tailored to neuron identity and neuropsychiatric disease by Xianjun Dong, Yunfei Bai, Zhixiang Liao, David Gritsch, Xiaoli Liu, Tao Wang, Rebeca Borges-Monroy, Alyssa Ehrlich, Geidy E. Serrano, Mel Β. Feany, Thomas G. Beach, Clemens R. Scherzer

    Published 2023
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    Artigo
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  11. 11
    Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium

    Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium by Jie Wang, Jiali Zhuang, Sowmya Iyer, Xiang Lin, Melissa C. Greven, Bo‐Hyun Kim, Jill E. Moore, Brian G. Pierce, Xianjun Dong, Daniel Virgil, Ewan Birney, Jui‐Hung Hung, Zhiping Weng

    Published 2012
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    Artigo
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  12. 12
    MicroRNAs Located in the Hox Gene Clusters Are Implicated in Huntington's Disease Pathogenesis

    MicroRNAs Located in the Hox Gene Clusters Are Implicated in Huntington's Disease Pathogenesis by Andrew Hoss, Vinay K. Kartha, Xianjun Dong, Jeanne C. Latourelle, Alexandra Dumitriu, Tiffany C. Hadzi, Marcy E. MacDonald, James F. Gusella, Schahram Akbarian, Jiang‐Fan Chen, Zhiping Weng, Richard H. Myers

    Published 2014
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    Artigo
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  13. 13
    Two independent transcription initiation codes overlap on vertebrate core promoters

    Two independent transcription initiation codes overlap on vertebrate core promoters by Vanja Haberle, Nan Li, Yavor Hadzhiev, Charles Plessy, Christopher Previti, Chirag Nepal, Jochen Gehrig, Xianjun Dong, Altuna Akalin, Ana Maria Suzuki, Wilfred F. J. van IJcken, Olivier Armant, Marco Ferg, Uwe Strähle, Piero Carninci, Ferenc Müller, Boris Lenhard

    Published 2014
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    Artigo
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  14. 14
    Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors

    Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors by Jie Wang, Jiali Zhuang, Sowmya Iyer, Xin-Ying Lin, Troy W. Whitfield, Melissa C. Greven, Brian G. Pierce, Xianjun Dong, Anshul Kundaje, Yong Cheng, Oliver J. Rando, Ewan Birney, R Myers, William Stafford Noble, M Snyder, Zhiping Weng

    Published 2012
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  15. 15
    Understanding transcriptional regulation by integrative analysis of transcription factor binding data

    Understanding transcriptional regulation by integrative analysis of transcription factor binding data by Chao Cheng, Roger P. Alexander, Renqiang Min, Jing Leng, Kevin Y. Yip, Joel Rozowsky, Koon‐Kiu Yan, Xianjun Dong, Sarah Djebali, Yijun Ruan, Carrie Davis, Piero Carninci, Timo Lassman, T Gingeras, Roderic Guigó, Ewan Birney, Zhiping Weng, M Snyder, Mark Gerstein

    Published 2012
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    Artigo
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  16. 16
    Epigenetic dysregulation of hairy and enhancer of split 4 (HES4) is associated with striatal degeneration in postmortem Huntington brains

    Epigenetic dysregulation of hairy and enhancer of split 4 (HES4) is associated with striatal degeneration in postmortem Huntington brains by Guang Bai, Iris Cheung, Hennady P. Shulha, Joana E. Coelho, Ping Li, Xianjun Dong, Mira Jakovcevski, Yumei Wang, Anastasia P. Grigorenko, Yan Jiang, Andrew Hoss, Krupal Patel, Ming Zheng, Е. И. Рогаев, Richard H. Myers, Zhiping Weng, Schahram Akbarian, Jiang‐Fan Chen

    Published 2014
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    Artigo
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  17. 17
    Accelerating Medicines Partnership: Parkinson's Disease. Genetic Resource

    Accelerating Medicines Partnership: Parkinson's Disease. Genetic Resource by Hirotaka Iwaki, Hampton L. Leonard, Mary B. Makarious, Matt Bookman, Barry Landin, David Vismer, Bradford Casey, J. Raphael Gibbs, Dena Hernández, Cornelis Blauwendraat, Dan Vitale, Yeajin Song, Dinesh Kumar, Clifton L. Dalgard, Mahdiar Sadeghi, Xianjun Dong, Leonie Misquitta, Sonja W. Scholz, Clemens R. Scherzer, Mike A. Nalls, Shameek Biswas, Andrew Singleton

    Published 2021
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    Artigo
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  18. 18
    Genome-wide association meta-analysis identifies 29 new acne susceptibility loci

    Genome-wide association meta-analysis identifies 29 new acne susceptibility loci by Brittany L. Mitchell, Jake Saklatvala, Nick Dand, Fiona A. Hagenbeek, Xin Li, Josine L. Min, Laurent F. Thomas, Meike Bartels, Jouke‐Jan Hottenga, Michelle K. Lupton, Dorret I. Boomsma, Xianjun Dong, Kristian Hveem, Mari Løset, Nicholas G. Martin, Juliet N. Barker, Jiali Han, Catherine Smith, Miguel E. Rentería, Michael A. Simpson

    Published 2022
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    Revisão
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  19. 19
    Enhancers active in dopamine neurons are a primary link between genetic variation and neuropsychiatric disease

    Enhancers active in dopamine neurons are a primary link between genetic variation and neuropsychiatric disease by Xianjun Dong, Zhixiang Liao, David Gritsch, Yavor Hadzhiev, Yunfei Bai, Joseph J. Locascio, Boris Guennewig, Ganqiang Liu, Cornelis Blauwendraat, Tao Wang, Charles H. Adler, John C. Hedreen, Richard L. M. Faull, Matthew P. Frosch, Peter T. Nelson, Patrizia Rizzu, Antony A. Cooper, Peter Heutink, Thomas G. Beach, John S. Mattick, Ferenc Müller, Clemens R. Scherzer

    Published 2018
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  20. 20
    β2-Adrenoreceptor is a regulator of the α-synuclein gene driving risk of Parkinson’s disease

    β2-Adrenoreceptor is a regulator of the α-synuclein gene driving risk of Parkinson’s disease by Shuchi Mittal, Kjetil Bjørnevik, Doo Soon Im, Adrian Flierl, Xianjun Dong, Joseph J. Locascio, Kristine M. Abo, Elizabeth Long, Ming Jin, Bing Xu, Yang Xiang, Jean‐Christophe Rochet, Anders Engeland, Patrizia Rizzu, Peter Heutink, Tim Bartels, Dennis J. Selkoe, Barbara J. Caldarone, Marcie A. Glicksman, Vikram Khurana, Birgitt Schüle, David S. Park, Trond Riise, Clemens R. Scherzer

    Published 2017
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