Torthaí cuardaigh - Wanding Zhou

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  1. 1
    PyComplexHeatmap: A Python package to visualize multimodal genomics data

    PyComplexHeatmap: A Python package to visualize multimodal genomics data de réir Wubin Ding, David Goldberg, Wanding Zhou

    Foilsithe / Cruthaithe 2023
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  2. 2
    Comprehensive characterization, annotation and innovative use of Infinium DNA methylation BeadChip probes

    Comprehensive characterization, annotation and innovative use of Infinium DNA methylation BeadChip probes de réir Wanding Zhou, Peter W. Laird, Hui Shen

    Foilsithe / Cruthaithe 2016
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  3. 3
    Comparative epigenome analysis using Infinium DNA methylation BeadChips

    Comparative epigenome analysis using Infinium DNA methylation BeadChips de réir Wubin Ding, Diljeet Kaur, Steve Horvath, Wanding Zhou

    Foilsithe / Cruthaithe 2023
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  4. 4
    SeSAMe: reducing artifactual detection of DNA methylation by Infinium BeadChips in genomic deletions

    SeSAMe: reducing artifactual detection of DNA methylation by Infinium BeadChips in genomic deletions de réir Wanding Zhou, Timothy J. Triche, Peter W. Laird, Hui Shen

    Foilsithe / Cruthaithe 2018
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  5. 5
    Switching roles for DNA and histone methylation depend on evolutionary ages of human endogenous retroviruses

    Switching roles for DNA and histone methylation depend on evolutionary ages of human endogenous retroviruses de réir Hitoshi Ohtani, Minmin Liu, Wanding Zhou, Gangning Liang, Peter A. Jones

    Foilsithe / Cruthaithe 2018
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  6. 6
    A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing

    A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing de réir Mian Umair Ahsan, Anagha Gouru, Joe Chan, Wanding Zhou, Kai Wang

    Foilsithe / Cruthaithe 2024
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  7. 7
    Low-input and single-cell methods for Infinium DNA methylation BeadChips

    Low-input and single-cell methods for Infinium DNA methylation BeadChips de réir Sol Moe Lee, Christian E. Loo, Rexxi D. Prasasya, Marisa S. Bartolomei, Rahul M. Kohli, Wanding Zhou

    Foilsithe / Cruthaithe 2024
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  8. 8
    Bias from removing read duplication in ultra-deep sequencing experiments

    Bias from removing read duplication in ultra-deep sequencing experiments de réir Wanding Zhou, Tenghui Chen, Hao Zhao, Agda Karina Eterovic, Funda Meric‐Bernstam, Gordon B. Mills, Ken Chen

    Foilsithe / Cruthaithe 2014
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  9. 9
    DNA methylation loss in late-replicating domains is linked to mitotic cell division

    DNA methylation loss in late-replicating domains is linked to mitotic cell division de réir Wanding Zhou, Huy Q. Dinh, Zachary Ramjan, Daniel J. Weisenberger, Charles M. Nicolet, Hui Shen, Peter W. Laird, Benjamin P. Berman

    Foilsithe / Cruthaithe 2018
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  10. 10
    Dual Inhibition of DNA and Histone Methyltransferases Increases Viral Mimicry in Ovarian Cancer Cells

    Dual Inhibition of DNA and Histone Methyltransferases Increases Viral Mimicry in Ovarian Cancer Cells de réir Minmin Liu, Stacey L. Thomas, Ashley K. DeWitt, Wanding Zhou, Zachary Madaj, Hitoshi Ohtani, Stephen B. Baylin, Gangning Liang, Peter A. Jones

    Foilsithe / Cruthaithe 2018
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  11. 11
    Characterizing DNA methylation signatures of retinoblastoma using aqueous humor liquid biopsy

    Characterizing DNA methylation signatures of retinoblastoma using aqueous humor liquid biopsy de réir Hongtao Li, Liya Xu, Daniel J. Weisenberger, Meng Li, Wanding Zhou, Chen‐Ching Peng, Kevin Stachelek, David Cobrinik, Gangning Liang, Jesse L. Berry

    Foilsithe / Cruthaithe 2022
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  12. 12
    novoBreak: local assembly for breakpoint detection in cancer genomes

    novoBreak: local assembly for breakpoint detection in cancer genomes de réir Zechen Chong, Jue Ruan, Min Gao, Wanding Zhou, Tenghui Chen, Xian Fan, Li Ding, Anna Y. Lee, Paul C. Boutros, Junjie Chen, Ken Chen

    Foilsithe / Cruthaithe 2016
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  13. 13
    TransVar: a multilevel variant annotator for precision genomics

    TransVar: a multilevel variant annotator for precision genomics de réir Wanding Zhou, Tenghui Chen, Zechen Chong, Mary A. Rohrdanz, James Melott, Chris Wakefield, Jia Zeng, John N. Weinstein, Funda Meric‐Bernstam, Gordon B. Mills, Ken Chen

    Foilsithe / Cruthaithe 2015
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  14. 14
    Vitamin C increases viral mimicry induced by 5-aza-2′-deoxycytidine

    Vitamin C increases viral mimicry induced by 5-aza-2′-deoxycytidine de réir Minmin Liu, Hitoshi Ohtani, Wanding Zhou, Andreas Due Ørskov, Jessica Charlet, Yang W. Zhang, Hui Shen, Stephen B. Baylin, Gangning Liang, Kirsten Grønbæk, Peter A. Jones

    Foilsithe / Cruthaithe 2016
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  15. 15
    Evaluation of whole-genome DNA methylation sequencing library preparation protocols

    Evaluation of whole-genome DNA methylation sequencing library preparation protocols de réir Jacob Morrison, Julie Koeman, Benjamin K. Johnson, Kelly K. Foy, Ian Beddows, Wanding Zhou, David Chesla, Larissa L. Rossell, Emily J. Siegwald, Marie Adams, Hui Shen

    Foilsithe / Cruthaithe 2021
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  16. 16
    Mother–child transmission of epigenetic information by tunable polymorphic imprinting

    Mother–child transmission of epigenetic information by tunable polymorphic imprinting de réir Brittany L. Carpenter, Wanding Zhou, Zachary Madaj, Ashley K. DeWitt, Jason P. Ross, Kirsten Grønbæk, Gangning Liang, Susan J. Clark, Peter L. Molloy, Peter A. Jones

    Foilsithe / Cruthaithe 2018
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  17. 17
    Activation of a Subset of Evolutionarily Young Transposable Elements and Innate Immunity Are Linked to Clinical Responses to 5-Azacytidine

    Activation of a Subset of Evolutionarily Young Transposable Elements and Innate Immunity Are Linked to Clinical Responses to 5-Azacytidine de réir Hitoshi Ohtani, Andreas Due Ørskov, Alexandra S. Helbo, Linn Gillberg, Minmin Liu, Wanding Zhou, Johanna Ungerstedt, Eva Hellström‐Lindberg, Weili Sun, Gangning Liang, Peter A. Jones, Kirsten Grønbæk

    Foilsithe / Cruthaithe 2020
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  18. 18
    Comprehensive evaluation of the Infinium human MethylationEPIC v2 BeadChip

    Comprehensive evaluation of the Infinium human MethylationEPIC v2 BeadChip de réir Diljeet Kaur, Sol Moe Lee, David Goldberg, Nathan J. Spix, Toshinori Hinoue, Hongtao Li, Varun B. Dwaraka, Ryan Smith, Hui Shen, Gangning Liang, Nicole Renke, Peter W. Laird, Wanding Zhou

    Foilsithe / Cruthaithe 2023
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  19. 19
    BISCUIT: an efficient, standards-compliant tool suite for simultaneous genetic and epigenetic inference in bulk and single-cell studies

    BISCUIT: an efficient, standards-compliant tool suite for simultaneous genetic and epigenetic inference in bulk and single-cell studies de réir Wanding Zhou, Benjamin K. Johnson, Jacob Morrison, Ian Beddows, James Eapen, Efrat Katsman, Ayush Semwal, Walid Abi Habib, Lyong Heo, Peter W. Laird, Benjamin P. Berman, Timothy J. Triche, Hui Shen

    Foilsithe / Cruthaithe 2024
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  20. 20
    Integrative Epigenetic Analysis Reveals Therapeutic Targets to the DNA Methyltransferase Inhibitor Guadecitabine (SGI‐110) in Hepatocellular Carcinoma

    Integrative Epigenetic Analysis Reveals Therapeutic Targets to the DNA Methyltransferase Inhibitor Guadecitabine (SGI‐110) in Hepatocellular Carcinoma de réir Minmin Liu, Lian Zhang, Hongtao Li, Toshinori Hinoue, Wanding Zhou, Hitoshi Ohtani, Anthony B. El-Khoueiry, John R. Daniels, Casey L. O’Connell, Tanya B. Dorff, Qianjin Lu, Daniel J. Weisenberger, Gangning Liang

    Foilsithe / Cruthaithe 2018
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