Ohcanbohtosat - Walker, Jason R

Informatics for RNA Sequencing: A Web Resource for Analysis on the Cloud Dahkki Griffith, Malachi, Walker, Jason R., Spies, Nicholas C., Ainscough, Benjamin J., Griffith, Obi L.

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Unraveling the chaotic genomic landscape of primary and metastatic canine appendicular osteosarcoma with current sequencing technologies and bioinformatic approaches Dahkki Chu, Shirley, Skidmore, Zachary L., Kunisaki, Jason, Walker, Jason R., Griffith, Malachi, Griffith, Obi L., Bryan, Jeffrey N.

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Failure to Detect Mutations in U2AF1 due to Changes in the GRCh38 Reference Sequence Dahkki Miller, Christopher A., Walker, Jason R., Jensen, Travis L., Hooper, William F., Fulton, Robert S., Painter, Jeffrey S., Sekeres, Mikkael A., Ley, Timothy J., Spencer, David H., Goll, Johannes B., Walter, Matthew J.

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Bam-readcount - rapid generation of basepair-resolution sequence metrics Dahkki Khanna, Ajay, Larson, David E., Srivatsan, Sridhar Nonavinkere, Mosior, Matthew, Abbott, Travis E., Kiwala, Susanna, Ley, Timothy J., Duncavage, Eric J., Walter, Matthew J., Walker, Jason R., Griffith, Obi L., Griffith, Malachi, Miller, Christopher A.

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DGIdb - Mining the druggable genome Dahkki Griffith, Malachi, Griffith, Obi L., Coffman, Adam C., Weible, James V., McMichael, Josh F., Spies, Nicholas C., Koval, James, Das, Indraniel, Callaway, Matthew B., Eldred, James M., Miller, Christopher A., Subramanian, Janakiraman, Govindan, Ramaswamy, Kumar, Runjun D., Bose, Ron, Ding, Li, Walker, Jason R., Larson, David E., Dooling, David J., Smith, Scott M., Ley, Timothy J., Mardis, Elaine R., Wilson, Richard K.

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Comprehensive discovery of non-coding RNAs in acute myeloid leukemia cell transcriptomes Dahkki Zhang, Jin, Griffith, Malachi, Miller, Christopher A., Griffith, Obi L., Spencer, David H., Walker, Jason R., Magrini, Vincent, McGrath, Sean D., Ly, Amy, Helton, Nichole M., Trissal, Maria, Link, Daniel C., Dang, Ha X., Larson, David E., Kulkarni, Shashikant, Cordes, Matthew G., Fronick, Catrina C., Fulton, Robert S., Klco, Jeffery M., Mardis, Elaine R., Ley, Timothy J., Wilson, Richard K., Maher, Christopher A.

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The clonal evolution of metastatic colorectal cancer Dahkki Dang, Ha X., Krasnick, Bradley A., White, Brian S., Grossman, Julie G., Strand, Matthew S., Zhang, Jin, Cabanski, Christopher R., Miller, Christopher A., Fulton, Robert S., Goedegebuure, S. Peter, Fronick, Catrina C., Griffith, Malachi, Larson, David E., Goetz, Brian D., Walker, Jason R., Hawkins, William G., Strasberg, Steven M., Linehan, David C., Lim, Kian H., Lockhart, A. Craig, Mardis, Elaine R., Wilson, Richard K., Ley, Timothy J., Maher, Christopher A., Fields, Ryan C.

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Comprehensive genomic analysis reveals FLT3 activation and a therapeutic strategy for a patient with relapsed adult B lymphoblastic leukemia Dahkki Griffith, Malachi, Griffith, Obi L., Krysiak, Kilannin, Skidmore, Zachary L., Christopher, Matthew J., Klco, Jeffery M., Ramu, Avinash, Lamprecht, Tamara L., Wagner, Alex H., Campbell, Katie M., Lesurf, Robert, Hundal, Jasreet, Zhang, Jin, Spies, Nicholas C., Ainscough, Benjamin J., Larson, David E., Heath, Sharon E., Fronick, Catrina, O'Laughlin, Shelly, Fulton, Robert, Magrini, Vincent, McGrath, Sean, Smith, Scott M., Miller, Christopher A., Maher, Christopher A., Payton, Jacqueline E., Walker, Jason R., Eldred, James M., Walter, Matthew J., Link, Daniel C., Graubert, Timothy A., Westervelt, Peter, Kulkarni, Shashikant, DiPersio, John F., Mardis, Elaine R., Wilson, Richard K., Ley, Timothy J.

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CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer Dahkki Griffith, Malachi, Spies, Nicholas C, Krysiak, Kilannin, McMichael, Joshua F, Coffman, Adam C, Danos, Arpad M, Ainscough, Benjamin J, Ramirez, Cody A, Rieke, Damian T, Kujan, Lynzey, Barnell, Erica K, Wagner, Alex H, Skidmore, Zachary L, Wollam, Amber, Liu, Connor J, Jones, Martin R, Bilski, Rachel L, Lesurf, Robert, Feng, Yan-Yang, Shah, Nakul M, Bonakdar, Melika, Trani, Lee, Matlock, Matthew, Ramu, Avinash, Campbell, Katie M, Spies, Gregory C, Graubert, Aaron P, Gangavarapu, Karthik, Eldred, James M, Larson, David E, Walker, Jason R, Good, Benjamin M, Wu, Chunlei, Su, Andrew I, Dienstmann, Rodrigo, Margolin, Adam A, Tamborero, David, Lopez-Bigas, Nuria, Jones, Steven J M, Bose, Ron, Spencer, David H, Wartman, Lukas D, Wilson, Richard K, Mardis, Elaine R, Griffith, Obi L

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The origin and evolution of mutations in Acute Myeloid Leukemia Dahkki Welch, John S., Ley, Timothy J., Link, Daniel C., Miller, Christopher A., Larson, David E., Koboldt, Daniel C., Wartman, Lukas D., Lamprecht, Tamara L., Liu, Fulu, Xia, Jun, Kandoth, Cyriac, Fulton, Robert S., McLellan, Michael D., Dooling, David J., Wallis, John W., Chen, Ken, Harris, Christopher C., Schmidt, Heather K., Kalicki-Veizer, Joelle M., Lu, Charles, Zhang, Qunyuan, Lin, Ling, O’Laughlin, Michelle D., McMichael, Joshua F., Delehaunty, Kim D., Fulton, Lucinda A., Magrini, Vincent J., McGrath, Sean D., Demeter, Ryan T., Vickery, Tammi L., Hundal, Jasreet, Cook, Lisa L., Swift, Gary W., Reed, Jerry P., Alldredge, Patricia A., Wylie, Todd N., Walker, Jason R., Watson, Mark A., Heath, Sharon E., Shannon, William D., Varghese, Nobish, Nagarajan, Rakesh, Payton, Jacqueline E., Baty, Jack D., Kulkarni, Shashikant, Klco, Jeffery M., Tomasson, Michael H., Westervelt, Peter, Walter, Matthew J., Graubert, Timothy A., DiPersio, John F., Ding, Li, Mardis, Elaine R., Wilson, Richard K.

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Genome Modeling System: A Knowledge Management Platform for Genomics Dahkki Griffith, Malachi, Griffith, Obi L., Smith, Scott M., Ramu, Avinash, Callaway, Matthew B., Brummett, Anthony M., Kiwala, Michael J., Coffman, Adam C., Regier, Allison A., Oberkfell, Ben J., Sanderson, Gabriel E., Mooney, Thomas P., Nutter, Nathaniel G., Belter, Edward A., Du, Feiyu, Long, Robert L., Abbott, Travis E., Ferguson, Ian T., Morton, David L., Burnett, Mark M., Weible, James V., Peck, Joshua B., Dukes, Adam, McMichael, Joshua F., Lolofie, Justin T., Derickson, Brian R., Hundal, Jasreet, Skidmore, Zachary L., Ainscough, Benjamin J., Dees, Nathan D., Schierding, William S., Kandoth, Cyriac, Kim, Kyung H., Lu, Charles, Harris, Christopher C., Maher, Nicole, Maher, Christopher A., Magrini, Vincent J., Abbott, Benjamin S., Chen, Ken, Clark, Eric, Das, Indraniel, Fan, Xian, Hawkins, Amy E., Hepler, Todd G., Wylie, Todd N., Leonard, Shawn M., Schroeder, William E., Shi, Xiaoqi, Carmichael, Lynn K., Weil, Matthew R., Wohlstadter, Richard W., Stiehr, Gary, McLellan, Michael D., Pohl, Craig S., Miller, Christopher A., Koboldt, Daniel C., Walker, Jason R., Eldred, James M., Larson, David E., Dooling, David J., Ding, Li, Mardis, Elaine R., Wilson, Richard K.

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