Zoekresultaten - Walenz, Brian P.

An algorithm for automated closure during assembly door Koren, Sergey, Miller, Jason R, Walenz, Brian P, Sutton, Granger

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Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies door Rhie, Arang, Walenz, Brian P., Koren, Sergey, Phillippy, Adam M.

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Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation door Koren, Sergey, Walenz, Brian P., Berlin, Konstantin, Miller, Jason R., Bergman, Nicholas H., Phillippy, Adam M.

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Weighted minimizer sampling improves long read mapping door Jain, Chirag, Rhie, Arang, Zhang, Haowen, Chu, Claudia, Walenz, Brian P, Koren, Sergey, Phillippy, Adam M

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Integrating Hi-C links with assembly graphs for chromosome-scale assembly door Ghurye, Jay, Rhie, Arang, Walenz, Brian P., Schmitt, Anthony, Selvaraj, Siddarth, Pop, Mihai, Phillippy, Adam M., Koren, Sergey

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Aggressive assembly of pyrosequencing reads with mates door Miller, Jason R., Delcher, Arthur L., Koren, Sergey, Venter, Eli, Walenz, Brian P., Brownley, Anushka, Johnson, Justin, Li, Kelvin, Mobarry, Clark, Sutton, Granger

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Nanoliter Reactors Improve Multiple Displacement Amplification of Genomes from Single Cells door Marcy, Yann, Ishoey, Thomas, Lasken, Roger S, Stockwell, Timothy B, Walenz, Brian P, Halpern, Aaron L, Beeson, Karen Y, Goldberg, Susanne M. D, Quake, Stephen R

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Genetic Variation in an Individual Human Exome door Ng, Pauline C., Levy, Samuel, Huang, Jiaqi, Stockwell, Timothy B., Walenz, Brian P., Li, Kelvin, Axelrod, Nelson, Busam, Dana A., Strausberg, Robert L., Venter, J. Craig

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HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads door Nurk, Sergey, Walenz, Brian P., Rhie, Arang, Vollger, Mitchell R., Logsdon, Glennis A., Grothe, Robert, Miga, Karen H., Eichler, Evan E., Phillippy, Adam M., Koren, Sergey

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De novo assembly of haplotype-resolved genomes with trio binning door Koren, Sergey, Rhie, Arang, Walenz, Brian P., Dilthey, Alexander T., Bickhart, Derek M., Kingan, Sarah B., Hiendleder, Stefan, Williams, John L., Smith, Timothy P. L., Phillippy, Adam M.

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Hybrid error correction and de novo assembly of single-molecule sequencing reads door Koren, Sergey, Schatz, Michael C., Walenz, Brian P., Martin, Jeffrey, Howard, Jason, Ganapathy, Ganeshkumar, Wang, Zhong, Rasko, David A., McCombie, W. Richard, Jarvis, Erich D., Phillippy, Adam M.

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The genomic structure of a human chromosome 22 nucleolar organizer region determined by TAR cloning door Kim, Jung-Hyun, Noskov, Vladimir N., Ogurtsov, Aleksey Y., Nagaraja, Ramaiah, Petrov, Nikolai, Liskovykh, Mikhail, Walenz, Brian P., Lee, Hee-Sheung, Kouprina, Natalay, Phillippy, Adam M., Shabalina, Svetlana A., Schlessinger, David, Larionov, Vladimir

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An improved genome assembly uncovers prolific tandem repeats in Atlantic cod door Tørresen, Ole K., Star, Bastiaan, Jentoft, Sissel, Reinar, William B., Grove, Harald, Miller, Jason R., Walenz, Brian P., Knight, James, Ekholm, Jenny M., Peluso, Paul, Edvardsen, Rolf B., Tooming-Klunderud, Ave, Skage, Morten, Lien, Sigbjørn, Jakobsen, Kjetill S., Nederbragt, Alexander J.

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Hybrid assembly with long and short reads improves discovery of gene family expansions door Miller, Jason R., Zhou, Peng, Mudge, Joann, Gurtowski, James, Lee, Hayan, Ramaraj, Thiruvarangan, Walenz, Brian P., Liu, Junqi, Stupar, Robert M., Denny, Roxanne, Song, Li, Singh, Namrata, Maron, Lyza G., McCouch, Susan R., McCombie, W. Richard, Schatz, Michael C., Tiffin, Peter, Young, Nevin D., Silverstein, Kevin A. T.

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Effect of sequence depth and length in long-read assembly of the maize inbred NC358 door Ou, Shujun, Liu, Jianing, Chougule, Kapeel M., Fungtammasan, Arkarachai, Seetharam, Arun S., Stein, Joshua C., Llaca, Victor, Manchanda, Nancy, Gilbert, Amanda M., Wei, Sharon, Chin, Chen-Shan, Hufnagel, David E., Pedersen, Sarah, Snodgrass, Samantha J., Fengler, Kevin, Woodhouse, Margaret, Walenz, Brian P., Koren, Sergey, Phillippy, Adam M., Hannigan, Brett T., Dawe, R. Kelly, Hirsch, Candice N., Hufford, Matthew B., Ware, Doreen

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Improved reference genome for the domestic horse increases assembly contiguity and composition door Kalbfleisch, Theodore S., Rice, Edward S., DePriest, Michael S., Walenz, Brian P., Hestand, Matthew S., Vermeesch, Joris R., O′Connell, Brendan L., Fiddes, Ian T., Vershinina, Alisa O., Saremi, Nedda F., Petersen, Jessica L., Finno, Carrie J., Bellone, Rebecca R., McCue, Molly E., Brooks, Samantha A., Bailey, Ernest, Orlando, Ludovic, Green, Richard E., Miller, Donald C., Antczak, Douglas F., MacLeod, James N.

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Author Correction: Improved reference genome for the domestic horse increases assembly contiguity and composition door Kalbfleisch, Theodore S., Rice, Edward S., DePriest, Michael S., Walenz, Brian P., Hestand, Matthew S., Vermeesch, Joris R., O’Connell, Brendan L., Fiddes, Ian T., Vershinina, Alisa O., Saremi, Nedda F., Petersen, Jessica L., Finno, Carrie J., Bellone, Rebecca R., McCue, Molly E., Brooks, Samantha A., Bailey, Ernest, Orlando, Ludovic, Green, Richard E., Miller, Donald C., Antczak, Douglas F., MacLeod, James N.

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The Diploid Genome Sequence of an Individual Human door Levy, Samuel, Sutton, Granger, Ng, Pauline C, Feuk, Lars, Halpern, Aaron L, Walenz, Brian P, Axelrod, Nelson, Huang, Jiaqi, Kirkness, Ewen F, Denisov, Gennady, Lin, Yuan, MacDonald, Jeffrey R, Pang, Andy Wing Chun, Shago, Mary, Stockwell, Timothy B, Tsiamouri, Alexia, Bafna, Vineet, Bansal, Vikas, Kravitz, Saul A, Busam, Dana A, Beeson, Karen Y, McIntosh, Tina C, Remington, Karin A, Abril, Josep F, Gill, John, Borman, Jon, Rogers, Yu-Hui, Frazier, Marvin E, Scherer, Stephen W, Strausberg, Robert L, Venter, J. Craig

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The Genome of Anopheles darlingi, the main neotropical malaria vector door Marinotti, Osvaldo, Cerqueira, Gustavo C., de Almeida, Luiz Gonzaga Paula, Ferro, Maria Inês Tiraboschi, Loreto, Elgion Lucio da Silva, Zaha, Arnaldo, Teixeira, Santuza M. R., Wespiser, Adam R., Almeida e Silva, Alexandre, Schlindwein, Aline Daiane, Pacheco, Ana Carolina Landim, da Silva, Artur Luiz da Costa, Graveley, Brenton R., Walenz, Brian P., Lima, Bruna de Araujo, Ribeiro, Carlos Alexandre Gomes, Nunes-Silva, Carlos Gustavo, de Carvalho, Carlos Roberto, Soares, Célia Maria de Almeida, de Menezes, Claudia Beatriz Afonso, Matiolli, Cleverson, Caffrey, Daniel, Araújo, Demetrius Antonio M., de Oliveira, Diana Magalhães, Golenbock, Douglas, Grisard, Edmundo Carlos, Fantinatti-Garboggini, Fabiana, de Carvalho, Fabíola Marques, Barcellos, Fernando Gomes, Prosdocimi, Francisco, May, Gemma, de Azevedo Junior, Gilson Martins, Guimarães, Giselle Moura, Goldman, Gustavo Henrique, Padilha, Itácio Q. M., Batista, Jacqueline da Silva, Ferro, Jesus Aparecido, Ribeiro, José M. C., Fietto, Juliana Lopes Rangel, Dabbas, Karina Maia, Cerdeira, Louise, Agnez-Lima, Lucymara Fassarella, Brocchi, Marcelo, de Carvalho, Marcos Oliveira, Teixeira, Marcus de Melo, Diniz Maia, Maria de Mascena, Goldman, Maria Helena S., Cruz Schneider, Maria Paula, Felipe, Maria Sueli Soares, Hungria, Mariangela, Nicolás, Marisa Fabiana, Pereira, Maristela, Montes, Martín Alejandro, Cantão, Maurício E., Vincentz, Michel, Rafael, Miriam Silva, Silverman, Neal, Stoco, Patrícia Hermes, Souza, Rangel Celso, Vicentini, Renato, Gazzinelli, Ricardo Tostes, Neves, Rogério de Oliveira, Silva, Rosane, Astolfi-Filho, Spartaco, Maciel, Talles Eduardo Ferreira, Ürményi, Turán P., Tadei, Wanderli Pedro, Camargo, Erney Plessmann, de Vasconcelos, Ana Tereza Ribeiro

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The complete sequence of a human genome* door Nurk, Sergey, Koren, Sergey, Rhie, Arang, Rautiainen, Mikko, Bzikadze, Andrey V., Mikheenko, Alla, Vollger, Mitchell R., Altemose, Nicolas, Uralsky, Lev, Gershman, Ariel, Aganezov, Sergey, Hoyt, Savannah J., Diekhans, Mark, Logsdon, Glennis A., Alonge, Michael, Antonarakis, Stylianos E., Borchers, Matthew, Bouffard, Gerard G., Brooks, Shelise Y., Caldas, Gina V., Chen, Nae-Chyun, Cheng, Haoyu, Chin, Chen-Shan, Chow, William, de Lima, Leonardo G., Dishuck, Philip C., Durbin, Richard, Dvorkina, Tatiana, Fiddes, Ian T., Formenti, Giulio, Fulton, Robert S., Fungtammasan, Arkarachai, Garrison, Erik, Grady, Patrick G.S., Graves-Lindsay, Tina A., Hall, Ira M., Hansen, Nancy F., Hartley, Gabrielle A., Haukness, Marina, Howe, Kerstin, Hunkapiller, Michael W., Jain, Chirag, Jain, Miten, Jarvis, Erich D., Kerpedjiev, Peter, Kirsche, Melanie, Kolmogorov, Mikhail, Korlach, Jonas, Kremitzki, Milinn, Li, Heng, Maduro, Valerie V., Marschall, Tobias, McCartney, Ann M., McDaniel, Jennifer, Miller, Danny E., Mullikin, James C., Myers, Eugene W., Olson, Nathan D., Paten, Benedict, Peluso, Paul, Pevzner, Pavel A., Porubsky, David, Potapova, Tamara, Rogaev, Evgeny I., Rosenfeld, Jeffrey A., Salzberg, Steven L., Schneider, Valerie A., Sedlazeck, Fritz J., Shafin, Kishwar, Shew, Colin J., Shumate, Alaina, Sims, Ying, Smit, Arian F. A., Soto, Daniela C., Sović, Ivan, Storer, Jessica M., Streets, Aaron, Sullivan, Beth A., Thibaud-Nissen, Françoise, Torrance, James, Wagner, Justin, Walenz, Brian P., Wenger, Aaron, Wood, Jonathan M. D., Xiao, Chunlin, Yan, Stephanie M., Young, Alice C., Zarate, Samantha, Surti, Urvashi, McCoy, Rajiv C., Dennis, Megan Y., Alexandrov, Ivan A., Gerton, Jennifer L., O’Neill, Rachel J., Timp, Winston, Zook, Justin M., Schatz, Michael C., Eichler, Evan E., Miga, Karen H., Phillippy, Adam M.

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