Rezultati - Vitalii Kleshchevnikov

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  1. 1
    Predicting the mutations generated by repair of Cas9-induced double-strand breaks

    Predicting the mutations generated by repair of Cas9-induced double-strand breaks od Felicity Allen, Luca Crepaldi, Clara Alsinet, Alexander Strong, Vitalii Kleshchevnikov, Pietro De Angeli, Petra Páleníková, Anton Khodak, Vladimir Yu Kiselev, Michael Kosicki, Andrew Bassett, Heather P. Harding, Yaron Galanty, Francisco Muñoz‐Martínez, Emmanouil Metzakopian, Stephen P. Jackson, Leopold Parts

    Izdano 2018
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  2. 2
    Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics

    Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics od Vitalii Kleshchevnikov, Artem Shmatko, Emma Dann, Alexander Aivazidis, Hamish W. King, Tong Li, Artem Lomakin, Veronika R. Kedlian, Mika Sarkin Jain, Jun Sung Park, Lauma Ramona, Elizabeth Tuck, Anna Arutyunyan, Roser Vento‐Tormo, Moritz Gerstung, Louisa K. James, Oliver Stegle, Omer Ali Bayraktar

    Izdano 2020
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  3. 3
    Spatial genomics maps the structure, nature and evolution of cancer clones

    Spatial genomics maps the structure, nature and evolution of cancer clones od Artem Lomakin, Jessica Svedlund, Carina Strell, Milana Gatarić, Artem Shmatko, Gleb D. Rukhovich, Jun Sung Park, Young Seok Ju, Stefan C. Dentro, Vitalii Kleshchevnikov, Vasyl Vaskivskyi, Tong Li, Omer Ali Bayraktar, Sarah E. Pinder, Andrea L. Richardson, Sandro Santagata, Peter J. Campbell, Hege G. Russnes, Moritz Gerstung, Mats Nilsson, Lucy Yates

    Izdano 2022
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  4. 4
    Mapping the developing human immune system across organs

    Mapping the developing human immune system across organs od Chenqu Suo, Emma Dann, Issac Goh, Laura Jardine, Vitalii Kleshchevnikov, Jong-Eun Park, Rachel A. Botting, Emily Stephenson, Justin Engelbert, Zewen Kelvin Tuong, Krzysztof Polański, Nadav Yayon, Chuan Xu, Ondřej Suchánek, Rasa Elmentaite, Cecilia Domínguez Conde, Peng He, Sophie Pritchard, Mohi Miah, Corina Moldovan, Alexander S. Steemers, Pavel Mazin, Martin Prete, Dave Horsfall, John C. Marioni, Menna R. Clatworthy, Muzlifah Haniffa, Sarah A. Teichmann

    Izdano 2022
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  5. 5
    Astrocyte layers in the mammalian cerebral cortex revealed by a single-cell in situ transcriptomic map

    Astrocyte layers in the mammalian cerebral cortex revealed by a single-cell in situ transcriptomic map od Omer Ali Bayraktar, Theresa Bartels, Staffan Holmqvist, Vitalii Kleshchevnikov, Araks Martirosyan, Damon Polioudakis, Lucile Ben Haim, Adam M. H. Young, Mykhailo Y. Batiuk, Kirti Prakash, Alexander P.Y. Brown, Kenny Roberts, Mercedes F. Paredes, Riki Kawaguchi, John H. Stockley, Khalida Sabeur, Sandra Chang, Eric J. Huang, Peter J. Hutchinson, Erik M. Ullian, Martin Hemberg, Giovanni Coppola, Matthew G. Holt, Daniel H. Geschwind, David H. Rowitch

    Izdano 2020
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  6. 6
    A Python library for probabilistic analysis of single-cell omics data

    A Python library for probabilistic analysis of single-cell omics data od Adam Gayoso, Romain Lopez, Galen Xing, Pierre Boyeau, Valeh Valiollah Pour Amiri, Justin Hong, Katherine Wu, Michael Jayasuriya, Edouard Mehlman, Maxime Langevin, Yining Liu, Jules Samaran, Gabriel Misrachi, Achille Nazaret, Oscar Clivio, Chenling Xu, Tal Ashuach, Mariano I. Gabitto, Mohammad Lotfollahi, Valentine Svensson, Eduardo da Veiga Beltrame, Vitalii Kleshchevnikov, Carlos Talavera‐López, Lior Pachter, Fabian J. Theis, Aaron Streets, Michael I. Jordan, Jeffrey Regier, Nir Yosef

    Izdano 2022
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  7. 7
    A spatial multi-omics atlas of the human lung reveals a novel immune cell survival niche

    A spatial multi-omics atlas of the human lung reveals a novel immune cell survival niche od Elo Madissoon, Amanda J. Oliver, Vitalii Kleshchevnikov, Anna Wilbrey-Clark, Krzysztof Polański, Ana Elisa Ribeiro Orsi, Lira Mamanova, Liam Bolt, Nathan Richoz, Rasa Elmentaite, J. Patrick Pett, Ni Huang, Peng He, Monika Dabrowska, Sophie Pritchard, Elizabeth Tuck, Elena Prigmore, Andrew Knights, Ágnes Oszlánczi, Adam Hunter, Sara F. Vieira, Minal Patel, Nikitas Georgakopoulos, Krishnaa T. Mahbubani, Kourosh Saeb‐Parsy, Menna R. Clatworthy, Omer Ali Bayraktar, Oliver Stegle, Natsuhiko Kumasaka, Sarah A. Teichmann, Kerstin B. Meyer

    Izdano 2021
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  8. 8
    A human embryonic limb cell atlas resolved in space and time

    A human embryonic limb cell atlas resolved in space and time od Bao Zhang, Peng He, John E. Lawrence, Shuaiyu Wang, Elizabeth Tuck, Brian A. Williams, Kenny Roberts, Vitalii Kleshchevnikov, Lira Mamanova, Liam Bolt, Krzysztof Polański, Tong Li, Rasa Elmentaite, Eirini S. Fasouli, Martin Prete, Xiaoling He, Nadav Yayon, Yixi Fu, Hao Yang, Liang Chen, Hui Zhang, Raphaël Blain, Alain Chédotal, David Fitzpatrick, Helen V. Firth, Andrew Dean, Omer Ali Bayraktar, John C. Marioni, Roger A. Barker, Mekayla A. Storer, B Wold, Hongbo Zhang, Sarah A. Teichmann

    Izdano 2023
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  9. 9
    Human skeletal muscle aging atlas

    Human skeletal muscle aging atlas od Veronika R. Kedlian, Yaning Wang, Tianliang Liu, Xiaoping Chen, Liam Bolt, Catherine Tudor, Zhuojian Shen, Eirini S. Fasouli, Elena Prigmore, Vitalii Kleshchevnikov, J. Patrick Pett, Tong Li, John E. Lawrence, Shani Perera, Martin Prete, Ni Huang, Qin Guo, Xinrui Zeng, Lu Yang, Krzysztof Polański, Nana-Jane Chipampe, Monika Dabrowska, Xiaobo Li, Omer Ali Bayraktar, Minal Patel, Natsuhiko Kumasaka, Krishnaa T. Mahbubani, Andy Peng Xiang, Kerstin B. Meyer, Kourosh Saeb‐Parsy, Sarah A. Teichmann, Hongbo Zhang

    Izdano 2024
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  10. 10
    Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro

    Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro od Luz García‐Alonso, Louis‐François Handfield, Kenny Roberts, Κωνσταντίνα Νικολακοπούλου, Ridma C. Fernando, Lucy Gardner, Benjamin Woodhams, Anna Arutyunyan, Krzysztof Polański, Regina Hoo, Carmen Sancho‐Serra, Tong Li, Kwasi Kwakwa, Elizabeth Tuck, Valentina Lorenzi, Hassan Massalha, Martin Prete, Vitalii Kleshchevnikov, Aleksandra Tarkowska, Tarryn Porter, Cecilia Mazzeo, Stijn van Dongen, Monika Dabrowska, Vasyl Vaskivskyi, Krishnaa T. Mahbubani, Jong-eun Park, Mercedes Jimenez‐Liñan, Lia S. Campos, Vladimir Yu Kiselev, Cecilia Lindskog, Paul Ayuk, Elena Prigmore, Michael R. Stratton, Kourosh Saeb‐Parsy, Ashley Moffett, Luiza Moore, Omer Ali Bayraktar, Sarah A. Teichmann, Margherita Y. Turco, Roser Vento‐Tormo

    Izdano 2021
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  11. 11
    A spatially resolved atlas of the human lung characterizes a gland-associated immune niche

    A spatially resolved atlas of the human lung characterizes a gland-associated immune niche od Elo Madissoon, Amanda J. Oliver, Vitalii Kleshchevnikov, Anna Wilbrey-Clark, Krzysztof Polański, Nathan Richoz, Ana Elisa Ribeiro Orsi, Lira Mamanova, Liam Bolt, Rasa Elmentaite, J. Patrick Pett, Ni Huang, Chuan Xu, Peng He, Monika Dabrowska, Sophie Pritchard, Elizabeth Tuck, Elena Prigmore, Shani Perera, Andrew Knights, Ágnes Oszlánczi, Adam Hunter, Sara F. Vieira, Minal Patel, Rik G.H. Lindeboom, Lia S. Campos, Kazuhiko Matsuo, Takashi Nakayama, Masahiro Yoshida, Kaylee B. Worlock, Marko Nikolić, Nikitas Georgakopoulos, Krishnaa T. Mahbubani, Kourosh Saeb‐Parsy, Omer Ali Bayraktar, Menna R. Clatworthy, Oliver Stegle, Natsuhiko Kumasaka, Sarah A. Teichmann, Kerstin B. Meyer

    Izdano 2022
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  12. 12
    Cells of the human intestinal tract mapped across space and time

    Cells of the human intestinal tract mapped across space and time od Rasa Elmentaite, Natsuhiko Kumasaka, Kenny Roberts, Aaron Fleming, Emma Dann, Hamish W. King, Vitalii Kleshchevnikov, Monika Dabrowska, Sophie Pritchard, Liam Bolt, Sara F. Vieira, Lira Mamanova, Ni Huang, Francesca Perrone, Issac Goh, Steven Lisgo, Matilda Katan, Steven Leonard, Thomas R. W. Oliver, C. Elizabeth Hook, Komal Nayak, Lia S. Campos, Cecilia Domínguez Conde, Emily Stephenson, Justin Engelbert, Rachel A. Botting, Krzysztof Polański, Stijn van Dongen, Minal Patel, Michael D. Morgan, John C. Marioni, Omer Ali Bayraktar, Kerstin B. Meyer, Xiaoling He, Roger A. Barker, Holm H. Uhlig, Krishnaa T. Mahbubani, Kourosh Saeb‐Parsy, Matthias Zilbauer, Menna R. Clatworthy, Muzlifah Haniffa, Kylie R. James, Sarah A. Teichmann

    Izdano 2021
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  13. 13
    A spatial human thymus cell atlas mapped to a continuous tissue axis

    A spatial human thymus cell atlas mapped to a continuous tissue axis od Nadav Yayon, Veronika R. Kedlian, Lena Boehme, Chenqu Suo, Brianna T. Wachter, Rebecca T. Beuschel, Oren Amsalem, Krzysztof Polański, Simon Koplev, Elizabeth Tuck, Emma Dann, Jolien Van Hulle, Shani Perera, Tom Putteman, Alexander V. Predeus, Monika Dabrowska, Laura Richardson, Catherine Tudor, Alexandra Y. Kreins, Justin Engelbert, Emily Stephenson, Vitalii Kleshchevnikov, Fabrizio De Rita, David Crossland, Marita Bosticardo, Francesca Pala, Elena Prigmore, Nana-Jane Chipampe, Martin Prete, Lijiang Fei, Ken To, Roger A. Barker, Xiaoling He, Filip Van Nieuwerburgh, Omer Ali Bayraktar, Minal Patel, E. Graham Davies, Muzlifah Haniffa, Virginie Uhlmann, Luigi D. Notarangelo, Ronald N. Germain, Andrea J. Radtke, John C. Marioni, Tom Taghon, Sarah A. Teichmann

    Izdano 2024
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  14. 14
    Defining and benchmarking open problems in single-cell analysis

    Defining and benchmarking open problems in single-cell analysis od Malte D. Luecken, Scott Gigante, Daniel B. Burkhardt, Robrecht Cannoodt, Daniel Strobl, Nikolay S. Markov, Luke Zappia, Giovanni Palla, Wesley Lewis, Daniel Dimitrov, Michael Vinyard, D S Magruder, Alma Andersson, Emma Dann, Qian Qin, Dominik J. Otto, Michal Klein, Olga Botvinnik, Louise Deconinck, Kai Waldrant, Bastian Rieck, Constantin Ahlmann-Eltze, Eduardo da Veiga Beltrame, Andrew Benz, Carmen Bravo González‐Blas, Ann Chen, Benjamin DeMeo, Can Ergen, Swann Floc’hlay, Adam Gayoso, Stephanie C. Hicks, Yuge Ji, Vitalii Kleshchevnikov, Gioele La Manno, Maximilian Lombardo, Romain Lopez, Dario Righelli, Hirak Sarkar, Valentine Svensson, Alexander Tong, Galen Xing, Chenling Xu, Jonathan M. Bloom, Angela Oliveira Pisco, Julio Sáez-Rodríguez, Drausin Wulsin, Luca Pinello, Yvan Saeys, Fabian J. Theis, Smita Krishnaswamy

    Izdano 2024
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