Search Results - Vilmos Adleff

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  1. 1
    Genome-wide repeat landscapes in cancer and cell-free DNA

    Genome-wide repeat landscapes in cancer and cell-free DNA by Akshaya V. Annapragada, Noushin Niknafs, James R. White, Daniel C. Bruhm, Christopher Cherry, Jamie E. Medina, Vilmos Adleff, Carolyn Hruban, Dimitrios Mathios, Zachariah H. Foda, Jillian Phallen, Robert B. Scharpf, Victor E. Velculescu

    Published 2024
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  2. 2
    The Effect of Preservative and Temperature on the Analysis of Circulating Tumor DNA

    The Effect of Preservative and Temperature on the Analysis of Circulating Tumor DNA by Sonya Parpart-Li, Bjarne R. Bartlett, Maria Popoli, Vilmos Adleff, Laura Tucker, Rebecca Steinberg, Andrew Georgiadis, Jill Phallen, Julie R. Brahmer, Nilo Azad, Ilene Browner, Daniel A. Laheru, Victor E. Velculescu, Mark Sausen, Luis A. Díaz

    Published 2016
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  3. 3
    DNA methylation and gene expression as determinants of genome-wide cell-free DNA fragmentation

    DNA methylation and gene expression as determinants of genome-wide cell-free DNA fragmentation by Michaël Noë, Dimitrios Mathios, Akshaya V. Annapragada, Shashikant Koul, Zacharia H. Foda, Jamie E. Medina, Stephen Cristiano, Christopher Cherry, Daniel C. Bruhm, Noushin Niknafs, Vilmos Adleff, Leonardo Ferreira, Hariharan Easwaran, Stephen B. Baylin, Jillian Phallen, Robert B. Scharpf, Victor E. Velculescu

    Published 2024
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  4. 4
    Integrated Genomic, Epigenomic, and Expression Analyses of Ovarian Cancer Cell Lines

    Integrated Genomic, Epigenomic, and Expression Analyses of Ovarian Cancer Cell Lines by Eniko Papp, Dorothy Hallberg, Gottfried E. Konecny, Daniel C. Bruhm, Vilmos Adleff, Michaël Noë, Ioannis Kagiampakis, Doreen N. Palsgrove, Dylan Conklin, Yasuto Kinose, James R. White, Michael F. Press, Ronny Drapkin, Hariharan Easwaran, Stephen B. Baylin, Dennis J. Slamon, Victor E. Velculescu, Robert B. Scharpf

    Published 2018
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  5. 5
    Early Noninvasive Detection of Response to Targeted Therapy in Non–Small Cell Lung Cancer

    Early Noninvasive Detection of Response to Targeted Therapy in Non–Small Cell Lung Cancer by Jillian Phallen, Alessandro Leal, Brian Woodward, Patrick M. Forde, Jarushka Naidoo, Kristen A. Marrone, Julie R. Brahmer, Jacob Fiksel, Jamie E. Medina, Stephen Cristiano, Doreen N. Palsgrove, Christopher D. Gocke, Daniel C. Bruhm, Parissa Keshavarzian, Vilmos Adleff, Elizabeth Weihe, Valsamo Anagnostou, Robert B. Scharpf, Victor E. Velculescu, Hatim Husain

    Published 2018
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  6. 6
    Metastatic Colorectal Cancer Treatment Response Evaluation by Ultra-Deep Sequencing of Cell-Free DNA and Matched White Blood Cells

    Metastatic Colorectal Cancer Treatment Response Evaluation by Ultra-Deep Sequencing of Cell-Free DNA and Matched White Blood Cells by Iris van ’t Erve, Jamie E. Medina, Alessandro Leal, Eniko Papp, Jillian Phallen, Vilmos Adleff, Elaine Jiayuee Chiao, Adith S. Arun, Karen Bolhuis, John K. Simmons, Aanavi Karandikar, Kenneth C. Valkenburg, Mark Sausen, Samuel V. Angiuoli, Robert B. Scharpf, Cornelis J. A. Punt, Gerrit A. Meijer, Victor E. Velculescu, Remond J.A. Fijneman

    Published 2022
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  7. 7
    Single-molecule genome-wide mutation profiles of cell-free DNA for non-invasive detection of cancer

    Single-molecule genome-wide mutation profiles of cell-free DNA for non-invasive detection of cancer by Daniel C. Bruhm, Dimitrios Mathios, Zachariah H. Foda, Akshaya V. Annapragada, Jamie E. Medina, Vilmos Adleff, Elaine Jiayuee Chiao, Leonardo Ferreira, Stephen Cristiano, James R. White, Sarah A. Mazzilli, Ehab Billatos, Avrum Spira, Ali H. Zaidi, Jeffrey Mueller, Amy K. Kim, Valsamo Anagnostou, Jillian Phallen, Robert B. Scharpf, Victor E. Velculescu

    Published 2023
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  8. 8
    Detecting Liver Cancer Using Cell-Free DNA Fragmentomes

    Detecting Liver Cancer Using Cell-Free DNA Fragmentomes by Zachariah H. Foda, Akshaya V. Annapragada, Kavya Boyapati, Daniel C. Bruhm, Nicholas A. Vulpescu, Jamie E. Medina, Dimitrios Mathios, Stephen Cristiano, Noushin Niknafs, Harry Luu, Michael Goggins, Robert A. Anders, Jing Sun, Shruti H. Meta, David L. Thomas, Gregory D. Kirk, Vilmos Adleff, Jillian Phallen, Robert B. Scharpf, Amy K. Kim, Victor E. Velculescu

    Published 2022
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  9. 9
    Establishment of Patient-Derived Tumor Xenograft Models of Epithelial Ovarian Cancer for Preclinical Evaluation of Novel Therapeutics

    Establishment of Patient-Derived Tumor Xenograft Models of Epithelial Ovarian Cancer for Preclinical Evaluation of Novel Therapeutics by Joyce F. Liu, Sangeetha Palakurthi, Qing Zeng, Shan Zhou, Elena Ivanova, Wei Huang, Ioannis K. Zervantonakis, Laura M. Selfors, Yiping Shen, Colin C. Pritchard, Mei Zheng, Vilmos Adleff, Eniko Papp, Huiying Piao, Marián Novak, Susan Fotheringham, Gerburg M. Wulf, Jessie M. English, Paul T. Kirschmeier, Victor E. Velculescu, Cloud P. Paweletz, Gordon B. Mills, David M. Livingston, Joan S. Brugge, Ursula A. Matulonis, Ronny Drapkin

    Published 2016
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  10. 10
    High grade serous ovarian carcinomas originate in the fallopian tube

    High grade serous ovarian carcinomas originate in the fallopian tube by Sana Intidhar Labidi‐Galy, Eniko Papp, Dorothy Hallberg, Noushin Niknafs, Vilmos Adleff, Michaël Noë, Rohit Bhattacharya, Marián Novak, Siân Jones, Jillian Phallen, Carolyn Hruban, Michelle S. Hirsch, Douglas I. Lin, Lauren E. Schwartz, Cécile L. Maire, Jean‐Christophe Tille, Michaela Bowden, A. Ayhan, Laura D. Wood, Robert B. Scharpf, Robert J. Kurman, Tian-Li Wang, Ie‐Ming Shih, Rachel Karchin, Ronny Drapkin, Victor E. Velculescu

    Published 2017
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  11. 11
    Clinical implications of genomic alterations in the tumour and circulation of pancreatic cancer patients

    Clinical implications of genomic alterations in the tumour and circulation of pancreatic cancer patients by Mark Sausen, Jillian Phallen, Vilmos Adleff, Siân Jones, Rebecca Leary, Michael T. Barrett, Valsamo Anagnostou, Sonya Parpart-Li, Derek Murphy, Qing Kay Li, Carolyn Hruban, Rob Scharpf, James R. White, Peter J. O’Dwyer, Peter J. Allen, James R. Eshleman, Craig B. Thompson, David S. Klimstra, David C. Linehan, Anirban Maitra, Ralph H. Hruban, Luis A. Díaz, Daniel D. Von Hoff, Julia S. Johansen, Jeffrey A. Drebin, Victor E. Velculescu

    Published 2015
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  12. 12
    Evolution of Neoantigen Landscape during Immune Checkpoint Blockade in Non–Small Cell Lung Cancer

    Evolution of Neoantigen Landscape during Immune Checkpoint Blockade in Non–Small Cell Lung Cancer by Valsamo Anagnostou, Kellie N. Smith, Patrick M. Forde, Noushin Niknafs, Rohit Bhattacharya, James R. White, Theresa Zhang, Vilmos Adleff, Jillian Phallen, Neha Wali, Carolyn Hruban, Violeta Beleva Guthrie, Kristen Rodgers, Jarushka Naidoo, Hyunseok Kang, William H. Sharfman, Christos Georgiades, Franco Verde, Peter B. Illei, Qing Kay Li, Edward Gabrielson, Malcolm V. Brock, Cynthia A. Zahnow, Stephen B. Baylin, Robert B. Scharpf, Julie R. Brahmer, Rachel Karchin, Drew M. Pardoll, Victor E. Velculescu

    Published 2016
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  13. 13
    The genomic landscape of response to EGFR blockade in colorectal cancer

    The genomic landscape of response to EGFR blockade in colorectal cancer by Andrea Bertotti, Eniko Papp, Siân Jones, Vilmos Adleff, Valsamo Anagnostou, Barbara Lupo, Mark Sausen, Jillian Phallen, Carolyn Hruban, Collin Tokheim, Noushin Niknafs, Monica Nesselbush, Karli Lytle, Francesco Sassi, Francesca Cottino, Giorgia Migliardi, Eugenia R. Zanella, Dario Ribero, Nadia Russolillo, Alfredo Mellano, Andrea Muratore, Gianluca Paraluppi, Mauro Salizzoni, Silvia Marsoni, Michael Kragh, Johan Lantto, Andrea Cassingena, Qing Kay Li, Rachel Karchin, Robert B. Scharpf, Andrea Sartore‐Bianchi, Salvatore Siena, Luis A. Díaz, Livio Trusolino, Victor E. Velculescu

    Published 2015
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  14. 14
    Multimodal genomic features predict outcome of immune checkpoint blockade in non-small-cell lung cancer

    Multimodal genomic features predict outcome of immune checkpoint blockade in non-small-cell lung cancer by Valsamo Anagnostou, Noushin Niknafs, Kristen A. Marrone, Daniel C. Bruhm, James R. White, Jarushka Naidoo, Karlijn Hummelink, Kim Monkhorst, Ferry Lalezari, Mara Lanis, Samuel Rosner, Joshua E. Reuss, Kellie N. Smith, Vilmos Adleff, Kristen Rodgers, Zineb Belcaid, Lamia Rhymee, Benjamin Levy, Josephine Feliciano, Christine L. Hann, David S. Ettinger, Christos Georgiades, Franco Verde, Peter B. Illei, Qing Kay Li, Alexander S. Baras, Edward Gabrielson, Malcolm V. Brock, Rachel Karchin, Drew M. Pardoll, Stephen B. Baylin, Julie R. Brahmer, Robert B. Scharpf, Patrick M. Forde, Victor E. Velculescu

    Published 2020
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  15. 15
    Direct detection of early-stage cancers using circulating tumor DNA

    Direct detection of early-stage cancers using circulating tumor DNA by Jillian Phallen, Mark Sausen, Vilmos Adleff, Alessandro Leal, Carolyn Hruban, James R. White, Valsamo Anagnostou, Jacob Fiksel, Stephen Cristiano, Eniko Papp, Savannah Speir, Thomas Reinert, Mai‐Britt W. Ørntoft, Brian Woodward, Derek Murphy, Sonya Parpart-Li, David R. Riley, Monica Nesselbush, Naomi Sengamalay, Andrew Georgiadis, Qing Kay Li, Mogens Rørbæk Madsen, Frank Viborg Mortensen, Joost Huiskens, Cornelis J.A. Punt, Nicole C.T. van Grieken, Remond J.A. Fijneman, Gerrit A. Meijer, Hatim Husain, Robert B. Scharpf, Luis A. Díaz, Siân Jones, Samuel V. Angiuoli, Torben Ørntoft, Hans Jørgen Nielsen, Claus L. Andersen, Victor E. Velculescu

    Published 2017
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  16. 16
    Dynamics of Tumor and Immune Responses during Immune Checkpoint Blockade in Non–Small Cell Lung Cancer

    Dynamics of Tumor and Immune Responses during Immune Checkpoint Blockade in Non–Small Cell Lung Cancer by Valsamo Anagnostou, Patrick M. Forde, James R. White, Noushin Niknafs, Carolyn Hruban, Jarushka Naidoo, Kristen A. Marrone, I.K. Ashok Sivakumar, Daniel C. Bruhm, Samuel Rosner, Jillian Phallen, Alessandro Leal, Vilmos Adleff, Kellie N. Smith, Tricia R. Cottrell, Lamia Rhymee, Doreen N. Palsgrove, Christine L. Hann, Benjamin Levy, Josephine Feliciano, Christos Georgiades, Franco Verde, Peter B. Illei, Qing Kay Li, Edward Gabrielson, Malcolm V. Brock, James M. Isbell, Jennifer L. Sauter, Janis M. Taube, Robert B. Scharpf, Rachel Karchin, Drew M. Pardoll, Jamie E. Chaft, Matthew D. Hellmann, Julie R. Brahmer, Victor E. Velculescu

    Published 2018
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  17. 17
    Genomic characterization of malignant progression in neoplastic pancreatic cysts

    Genomic characterization of malignant progression in neoplastic pancreatic cysts by Michaël Noë, Noushin Niknafs, Catherine G. Fischer, Wenzel M. Hackeng, Violeta Beleva Guthrie, Waki Hosoda, Marija Debeljak, Eniko Papp, Vilmos Adleff, James R. White, Claudio Luchini, Antonio Pea, Aldo Scarpa, Giovanni Butturini, Giuseppe Zamboni, M. Paola Castelli, Seung‐Mo Hong, Shinichi Yachida, Nobuyoshi Hiraoka, Anthony J. Gill, Jaswinder S. Samra, G. Johan A. Offerhaus, Anne Hoorens, Joanne Verheij, Casper Jansen, Volkan Adsay, Wei Jiang, Jordan M. Winter, Jorge Albores‐Saavedra, Benoît Terris, Elizabeth D. Thompson, Nicholas J. Roberts, Ralph H. Hruban, Rachel Karchin, Robert B. Scharpf, Lodewijk A.A. Brosens, Victor E. Velculescu, Laura D. Wood

    Published 2020
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  18. 18
    Early detection of ovarian cancer using cell-free DNA fragmentomes and protein biomarkers

    Early detection of ovarian cancer using cell-free DNA fragmentomes and protein biomarkers by Jamie E. Medina, Akshaya V. Annapragada, Pien Lof, Sarah Short, Adrianna L. Bartolomucci, Dimitrios Mathios, Shashikant Koul, Noushin Niknafs, Michaël Noë, Zachariah H. Foda, Daniel C. Bruhm, Carolyn Hruban, Nicholas A. Vulpescu, Euihye Jung, Renu Dua, Jenna VanLiere Canzoniero, Stephen Cristiano, Vilmos Adleff, Heather Symecko, Daan van den Broek, Lori J. Sokoll, Stephen B. Baylin, Michael F. Press, Dennis J. Slamon, Gottfried E. Konecny, Christina Therkildsen, Beatriz Carvalho, Gerrit A. Meijer, Claus L. Andersen, Susan M. Domchek, Ronny Drapkin, Robert B. Scharpf, Jillian Phallen, Christine A.R. Lok, Victor E. Velculescu

    Published 2024
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  19. 19
    Genome-wide cell-free DNA fragmentation in patients with cancer

    Genome-wide cell-free DNA fragmentation in patients with cancer by Stephen Cristiano, Alessandro Leal, Jillian Phallen, Jacob Fiksel, Vilmos Adleff, Daniel C. Bruhm, Sarah Østrup Jensen, Jamie E. Medina, Carolyn Hruban, James R. White, Doreen N. Palsgrove, Noushin Niknafs, Valsamo Anagnostou, Patrick M. Forde, Jarushka Naidoo, Kristen A. Marrone, Julie R. Brahmer, Brian Woodward, Hatim Husain, Karlijn L. van Rooijen, Mai‐Britt W. Ørntoft, Anders Husted Madsen, Cornelis J.�H. van de Velde, Marcel Verheij, Annemieke Cats, Cornelis J. A. Punt, Geraldine R. Vink, Nicole C.T. van Grieken, Miriam Koopman, Remond J.A. Fijneman, Julia S. Johansen, Hans Jørgen Nielsen, Gerrit A. Meijer, Claus L. Andersen, Robert B. Scharpf, Victor E. Velculescu

    Published 2019
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  20. 20
    White blood cell and cell-free DNA analyses for detection of residual disease in gastric cancer

    White blood cell and cell-free DNA analyses for detection of residual disease in gastric cancer by Alessandro Leal, Nicole C.T. van Grieken, Doreen N. Palsgrove, Jillian Phallen, Jamie E. Medina, Carolyn Hruban, Mark A. M. Broeckaert, Valsamo Anagnostou, Vilmos Adleff, Daniel C. Bruhm, Jenna VanLiere Canzoniero, Jacob Fiksel, Marianne Nordsmark, Fabienne Warmerdam, Henk M.W. Verheul, Dick Johan van Spronsen, Laurens V. Beerepoot, Maud M. Geenen, Johanneke E.A. Portielje, Edwin P.M. Jansen, Johanna van Sandick, Elma Meershoek‐Klein Kranenbarg, Hanneke W.M. van Laarhoven, Donald L. van der Peet, Cornelis J.�H. van de Velde, Marcel Verheij, Remond J.A. Fijneman, Robert B. Scharpf, Gerrit A. Meijer, Annemieke Cats, Victor E. Velculescu

    Published 2020
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