檢索結果 - Vezzi, Francesco

Feature-by-Feature – Evaluating De Novo Sequence Assembly 由 Vezzi, Francesco, Narzisi, Giuseppe, Mishra, Bud

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GapFiller: a de novo assembly approach to fill the gap within paired reads 由 Nadalin, Francesca, Vezzi, Francesco, Policriti, Alberto

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Reevaluating Assembly Evaluations with Feature Response Curves: GAGE and Assemblathons 由 Vezzi, Francesco, Narzisi, Giuseppe, Mishra, Bud

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Fast, accurate, and lightweight analysis of BS-treated reads with ERNE 2 由 Prezza, Nicola, Vezzi, Francesco, Käller, Max, Policriti, Alberto

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GAM-NGS: genomic assemblies merger for next generation sequencing 由 Vicedomini, Riccardo, Vezzi, Francesco, Scalabrin, Simone, Arvestad, Lars, Policriti, Alberto

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BESST - Efficient scaffolding of large fragmented assemblies 由 Sahlin, Kristoffer, Vezzi, Francesco, Nystedt, Björn, Lundeberg, Joakim, Arvestad, Lars

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TIDDIT, an efficient and comprehensive structural variant caller for massive parallel sequencing data 由 Eisfeldt, Jesper, Vezzi, Francesco, Olason, Pall, Nilsson, Daniel, Lindstrand, Anna

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Recommendations on e-infrastructures for next-generation sequencing 由 Spjuth, Ola, Bongcam-Rudloff, Erik, Dahlberg, Johan, Dahlö, Martin, Kallio, Aleksi, Pireddu, Luca, Vezzi, Francesco, Korpelainen, Eija

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Evolutionary history of host use, rather than plant phylogeny, determines gene expression in a generalist butterfly 由 Celorio-Mancera, Maria de la Paz, Wheat, Christopher W., Huss, Mikael, Vezzi, Francesco, Neethiraj, Ramprasad, Reimegård, Johan, Nylin, Sören, Janz, Niklas

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Transcriptomics and methylomics of CD4-positive T cells in arsenic-exposed women 由 Engström, Karin, Wojdacz, Tomasz K., Marabita, Francesco, Ewels, Philip, Käller, Max, Vezzi, Francesco, Prezza, Nicola, Gruselius, Joel, Vahter, Marie, Broberg, Karin

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Comprehensive structural variation genome map of individuals carrying complex chromosomal rearrangements 由 Eisfeldt, Jesper, Pettersson, Maria, Vezzi, Francesco, Wincent, Josephine, Käller, Max, Gruselius, Joel, Nilsson, Daniel, Syk Lundberg, Elisabeth, Carvalho, Claudia M. B., Lindstrand, Anna

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Efficient de novo assembly of large and complex genomes by massively parallel sequencing of Fosmid pools 由 Alexeyenko, Andrey, Nystedt, Björn, Vezzi, Francesco, Sherwood, Ellen, Ye, Rosa, Knudsen, Bjarne, Simonsen, Martin, Turner, Benjamin, de Jong, Pieter, Wu, Cheng-Cang, Lundeberg, Joakim

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High-resolution detection of chromosomal rearrangements in leukemias through mate pair whole genome sequencing 由 Tran, Anh Nhi, Taylan, Fulya, Zachariadis, Vasilios, Ivanov Öfverholm, Ingegerd, Lindstrand, Anna, Vezzi, Francesco, Lötstedt, Britta, Nordenskjöld, Magnus, Nordgren, Ann, Nilsson, Daniel, Barbany, Gisela

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De Novo Assembly of Two Swedish Genomes Reveals Missing Segments from the Human GRCh38 Reference and Improves Variant Calling of Population-Scale Sequencing Data 由 Ameur, Adam, Che, Huiwen, Martin, Marcel, Bunikis, Ignas, Dahlberg, Johan, Höijer, Ida, Häggqvist, Susana, Vezzi, Francesco, Nordlund, Jessica, Olason, Pall, Feuk, Lars, Gyllensten, Ulf

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Whole genome sequencing of cytogenetically balanced chromosome translocations identifies potentially pathological gene disruptions and highlights the importance of microhomology in... 由 Nilsson, Daniel, Pettersson, Maria, Gustavsson, Peter, Förster, Alisa, Hofmeister, Wolfgang, Wincent, Josephine, Zachariadis, Vasilios, Anderlid, Britt-Marie, Nordgren, Ann, Mäkitie, Outi, Wirta, Valtteri, Käller, Max, Vezzi, Francesco, Lupski, James R, Nordenskjöld, Magnus, Lundberg, Elisabeth Syk, Carvalho, Claudia M. B., Lindstrand, Anna

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Replicative and non-replicative mechanisms in the formation of clustered CNVs are indicated by whole genome characterization 由 Nazaryan-Petersen, Lusine, Eisfeldt, Jesper, Pettersson, Maria, Lundin, Johanna, Nilsson, Daniel, Wincent, Josephine, Lieden, Agne, Lovmar, Lovisa, Ottosson, Jesper, Gacic, Jelena, Mäkitie, Outi, Nordgren, Ann, Vezzi, Francesco, Wirta, Valtteri, Käller, Max, Hjortshøj, Tina Duelund, Jespersgaard, Cathrine, Houssari, Rayan, Pignata, Laura, Bak, Mads, Tommerup, Niels, Lundberg, Elisabeth Syk, Tümer, Zeynep, Lindstrand, Anna

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SweGen: a whole-genome data resource of genetic variability in a cross-section of the Swedish population 由 Ameur, Adam, Dahlberg, Johan, Olason, Pall, Vezzi, Francesco, Karlsson, Robert, Martin, Marcel, Viklund, Johan, Kähäri, Andreas Kusalananda, Lundin, Pär, Che, Huiwen, Thutkawkorapin, Jessada, Eisfeldt, Jesper, Lampa, Samuel, Dahlberg, Mats, Hagberg, Jonas, Jareborg, Niclas, Liljedahl, Ulrika, Jonasson, Inger, Johansson, Åsa, Feuk, Lars, Lundeberg, Joakim, Syvänen, Ann-Christine, Lundin, Sverker, Nilsson, Daniel, Nystedt, Björn, Magnusson, Patrik KE, Gyllensten, Ulf

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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species 由 Bradnam, Keith R, Fass, Joseph N, Alexandrov, Anton, Baranay, Paul, Bechner, Michael, Birol, Inanç, Boisvert, Sébastien, Chapman, Jarrod A, Chapuis, Guillaume, Chikhi, Rayan, Chitsaz, Hamidreza, Chou, Wen-Chi, Corbeil, Jacques, Del Fabbro, Cristian, Docking, T Roderick, Durbin, Richard, Earl, Dent, Emrich, Scott, Fedotov, Pavel, Fonseca, Nuno A, Ganapathy, Ganeshkumar, Gibbs, Richard A, Gnerre, Sante, Godzaridis, Élénie, Goldstein, Steve, Haimel, Matthias, Hall, Giles, Haussler, David, Hiatt, Joseph B, Ho, Isaac Y, Howard, Jason, Hunt, Martin, Jackman, Shaun D, Jaffe, David B, Jarvis, Erich D, Jiang, Huaiyang, Kazakov, Sergey, Kersey, Paul J, Kitzman, Jacob O, Knight, James R, Koren, Sergey, Lam, Tak-Wah, Lavenier, Dominique, Laviolette, François, Li, Yingrui, Li, Zhenyu, Liu, Binghang, Liu, Yue, Luo, Ruibang, MacCallum, Iain, MacManes, Matthew D, Maillet, Nicolas, Melnikov, Sergey, Naquin, Delphine, Ning, Zemin, Otto, Thomas D, Paten, Benedict, Paulo, Octávio S, Phillippy, Adam M, Pina-Martins, Francisco, Place, Michael, Przybylski, Dariusz, Qin, Xiang, Qu, Carson, Ribeiro, Filipe J, Richards, Stephen, Rokhsar, Daniel S, Ruby, J Graham, Scalabrin, Simone, Schatz, Michael C, Schwartz, David C, Sergushichev, Alexey, Sharpe, Ted, Shaw, Timothy I, Shendure, Jay, Shi, Yujian, Simpson, Jared T, Song, Henry, Tsarev, Fedor, Vezzi, Francesco, Vicedomini, Riccardo, Vieira, Bruno M, Wang, Jun, Worley, Kim C, Yin, Shuangye, Yiu, Siu-Ming, Yuan, Jianying, Zhang, Guojie, Zhang, Hao, Zhou, Shiguo, Korf, Ian F

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