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  1. 1
    Droplet scRNA-seq is not zero-inflated

    Droplet scRNA-seq is not zero-inflated por Valentine Svensson

    Publicado em 2019
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  2. 2
    Droplet scRNA-seq is not zero-inflated

    Droplet scRNA-seq is not zero-inflated por Valentine Svensson

    Publicado em 2020
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  3. 3
    RNA Velocity: Molecular Kinetics from Single-Cell RNA-Seq

    RNA Velocity: Molecular Kinetics from Single-Cell RNA-Seq por Valentine Svensson, Lior Pachter

    Publicado em 2018
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  4. 4
    Protein velocity and acceleration from single-cell multiomics experiments

    Protein velocity and acceleration from single-cell multiomics experiments por Gennady Gorin, Valentine Svensson, Lior Pachter

    Publicado em 2020
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  5. 5
    SpatialDE: identification of spatially variable genes

    SpatialDE: identification of spatially variable genes por Valentine Svensson, Sarah A. Teichmann, Oliver Stegle

    Publicado em 2018
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  6. 6
    Interpretable factor models of single-cell RNA-seq via variational autoencoders

    Interpretable factor models of single-cell RNA-seq via variational autoencoders por Valentine Svensson, Adam Gayoso, Nir Yosef, Lior Pachter

    Publicado em 2020
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  7. 7
    A curated database reveals trends in single-cell transcriptomics

    A curated database reveals trends in single-cell transcriptomics por Valentine Svensson, Eduardo da Veiga Beltrame, Lior Pachter

    Publicado em 2020
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  8. 8
    Computational approaches for interpreting sc<scp>RNA</scp>‐seq data

    Computational approaches for interpreting sc<scp>RNA</scp>‐seq data por Raghd Rostom, Valentine Svensson, Sarah A. Teichmann, Gozde Kar

    Publicado em 2017
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  9. 9
    The Technology and Biology of Single-Cell RNA Sequencing

    The Technology and Biology of Single-Cell RNA Sequencing por Aleksandra A. Kolodziejczyk, Jong Kim, Valentine Svensson, John C. Marioni, Sarah A. Teichmann

    Publicado em 2015
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  10. 10
    Single-cell RNA-sequencing resolves self-antigen expression during mTEC development

    Single-cell RNA-sequencing resolves self-antigen expression during mTEC development por Ricardo J. Miragaia, Xiuwei Zhang, Tomás Gomes, Valentine Svensson, Tomislav Ilicic, Johan Henriksson, Gozde Kar, Tapio Lönnberg

    Publicado em 2018
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  11. 11
    An atlas of mouse CD4+ T cell transcriptomes

    An atlas of mouse CD4+ T cell transcriptomes por Michael J. T. Stubbington, Bidesh Mahata, Valentine Svensson, Andrew Deonarine, Jesper K. Nissen, Alexander G. Betz, Sarah A. Teichmann

    Publicado em 2015
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  12. 12
    Single-Cell RNA-Sequencing Reveals a Continuous Spectrum of Differentiation in Hematopoietic Cells

    Single-Cell RNA-Sequencing Reveals a Continuous Spectrum of Differentiation in Hematopoietic Cells por Iain C. Macaulay, Valentine Svensson, Charlotte Labalette, Lauren Ferreira, Fiona Hamey, Thierry Voet, Sarah A. Teichmann, Ana Cvejic

    Publicado em 2016
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  13. 13
    Power analysis of single-cell RNA-sequencing experiments

    Power analysis of single-cell RNA-sequencing experiments por Valentine Svensson, Kedar Nath Natarajan, Lam-Ha Ly, Ricardo J. Miragaia, Charlotte Labalette, Iain C. Macaulay, Ana Cvejic, Sarah A. Teichmann

    Publicado em 2017
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  14. 14
    MERVL/Zscan4 Network Activation Results in Transient Genome-wide DNA Demethylation of mESCs

    MERVL/Zscan4 Network Activation Results in Transient Genome-wide DNA Demethylation of mESCs por Mélanie Eckersley-Maslin, Valentine Svensson, Christel Krueger, Thomas M. Stubbs, Pascal Giehr, Felix Krueger, Ricardo J. Miragaia, Charalampos Kyriakopoulos, Rebecca V. Berrens, Inês Milagre, Jörn Walter, Sarah A. Teichmann, Wolf Reik

    Publicado em 2016
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  15. 15
    Single-cell transcriptomics identifies CD44 as a marker and regulator of endothelial to haematopoietic transition

    Single-cell transcriptomics identifies CD44 as a marker and regulator of endothelial to haematopoietic transition por Morgan Oatley, Özge Vargel Bölükbaşı, Valentine Svensson, Maya Shvartsman, Kerstin Ganter, Katharina Zirngibl, Polina V. Pavlovich, Vladislava Milchevskaya, Vladimira Foteva, Kedar Nath Natarajan, Bianka Baying, Vladimı́r Beneš, Kiran Raosaheb Patil, Sarah A. Teichmann, Christophe Lancrin

    Publicado em 2020
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  16. 16
    Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation

    Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation por Valentina Proserpio, Andrea Piccolo, Liora Haim-Vilmovsky, Gozde Kar, Tapio Lönnberg, Valentine Svensson, Jhuma Pramanik, Kedar Nath Natarajan, Weichao Zhai, Xiuwei Zhang, Giacomo Donati, Melis Kayikci, Jurij Kotar, Andrew N. J. McKenzie, Ruddy Montandon, Oliver Billker, Steven Woodhouse, Pietro Cicuta, Mario Nicodemi, Sarah A. Teichmann

    Publicado em 2016
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  17. 17
    scvi-tools: a library for deep probabilistic analysis of single-cell omics data

    scvi-tools: a library for deep probabilistic analysis of single-cell omics data por Adam Gayoso, Romain Lopez, Galen Xing, Pierre Boyeau, K. Wu, Michael Jayasuriya, Edouard Melhman, Maxime Langevin, Yining Liu, Jules Samaran, Gabriel Misrachi, Achille Nazaret, Oscar Clivio, Chenling Xu, Tal Ashuach, Mohammad Lotfollahi, Valentine Svensson, Eduardo da Veiga Beltrame, Carlos Talavera‐López, Lior Pachter, Fabian J. Theis, Aaron Streets, Michael I. Jordan, Jeffrey Regier, Nir Yosef

    Publicado em 2021
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  18. 18
    Single-cell RNA-seq and computational analysis using temporal mixture modeling resolves T <sub>H</sub> 1/T <sub>FH</sub> fate bifurcation in malaria

    Single-cell RNA-seq and computational analysis using temporal mixture modeling resolves T <sub>H</sub> 1/T <sub>FH</sub> fate bifurcation in malaria por Tapio Lönnberg, Valentine Svensson, Kylie R. James, Daniel Fernandez‐Ruiz, Ismail Sebina, Ruddy Montandon, Megan S. F. Soon, Lily G. Fogg, Arya Sheela Nair, Urijah N. Liligeto, Michael J. T. Stubbington, Lam-Ha Ly, Frederik Otzen Bagger, Max Zwiessele, Neil D. Lawrence, Fernando Souza-Fonseca-Guimarães, Patrick T. Bunn, Christian Engwerda, William R. Heath, Oliver Billker, Oliver Stegle, Ashraful Haque, Sarah A. Teichmann

    Publicado em 2017
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  19. 19
    Transcriptome dynamics of CD4+ T cells during malaria maps gradual transit from effector to memory

    Transcriptome dynamics of CD4+ T cells during malaria maps gradual transit from effector to memory por Megan S. F. Soon, Hyun Jae Lee, Jessica A. Engel, Jasmin Straube, Bryce S. Thomas, Clara P. S. Pernold, Lachlan S. Clarke, Pawat Laohamonthonkul, Rohit Haldar, Cameron G. Williams, Lianne I. M. Lansink, Marcela L. Moreira, Michael Bramhall, Lambros T. Koufariotis, Scott Wood, Xi Chen, Kylie R. James, Tapio Lönnberg, Steven Lane, Gabrielle T. Belz, Christian Engwerda, David S. Khoury, Miles P. Davenport, Valentine Svensson, Sarah A. Teichmann, Ashraful Haque

    Publicado em 2020
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  20. 20
    A Python library for probabilistic analysis of single-cell omics data

    A Python library for probabilistic analysis of single-cell omics data por Adam Gayoso, Romain Lopez, Galen Xing, Pierre Boyeau, Valeh Valiollah Pour Amiri, Justin Hong, Katherine Wu, Michael Jayasuriya, Edouard Mehlman, Maxime Langevin, Yining Liu, Jules Samaran, Gabriel Misrachi, Achille Nazaret, Oscar Clivio, Chenling Xu, Tal Ashuach, Mariano I. Gabitto, Mohammad Lotfollahi, Valentine Svensson, Eduardo da Veiga Beltrame, Vitalii Kleshchevnikov, Carlos Talavera‐López, Lior Pachter, Fabian J. Theis, Aaron Streets, Michael I. Jordan, Jeffrey Regier, Nir Yosef

    Publicado em 2022
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