Torthaí cuardaigh - Turpaz, Yaron

CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues de réir Dundas, Joe, Ouyang, Zheng, Tseng, Jeffery, Binkowski, Andrew, Turpaz, Yaron, Liang, Jie

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Characterization of the effect of sample quality on high density oligonucleotide microarray data using progressively degraded rat liver RNA de réir Thompson, Karol L, Pine, P Scott, Rosenzweig, Barry A, Turpaz, Yaron, Retief, Jacques

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Ploidy status and copy number aberrations in primary glioblastomas defined by integrated analysis of allelic ratios, signal ratios and loss of heterozygosity using 500K SNP Mapping... de réir Gardina, Paul J, Lo, Ken C, Lee, Walter, Cowell, John K, Turpaz, Yaron

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Overlay Tool(©) for aCGHViewer(©): An Analysis Module Built for aCGHViewer(©) used to Perform Comparisons of Data Derived from Different Microarray Platforms de réir Lo, Ken C., Shankar, Ganesh, Turpaz, Yaron, Bailey, Dione, Rossi, Michael R., Burkhardt, Tania, Liang, Ping, Cowell, John K.

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The blood DNA virome in 8,000 humans de réir Moustafa, Ahmed, Xie, Chao, Kirkness, Ewen, Biggs, William, Wong, Emily, Turpaz, Yaron, Bloom, Kenneth, Delwart, Eric, Nelson, Karen E., Venter, J. Craig, Telenti, Amalio

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DNA Copy Number Analysis in Gastrointestinal Stromal Tumors Using Gene Expression Microarrays de réir Antonescu, Cristina R., Wu, Kai, Xing, Guoliang Leon, Cao, Manqiu, Turpaz, Yaron, Leversha, Margaret A., Hubbell, Earl, Maki, Robert G., Miyada, C. Garrett, Pillai, Raji

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The DNA Architectural Protein HMGB1 Facilitates RTA-Mediated Viral Gene Expression in Gamma-2 Herpesviruses de réir Jung Song, Moon, Hwang, Seungmin, Wong, Wendy, Round, June, Martinez-Guzman, DeeAnn, Turpaz, Yaron, Liang, Jie, Wong, Ben, Johnson, Reid C., Carey, Michael, Sun, Ren

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Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array de réir Gardina, Paul J, Clark, Tyson A, Shimada, Brian, Staples, Michelle K, Yang, Qing, Veitch, James, Schweitzer, Anthony, Awad, Tarif, Sugnet, Charles, Dee, Suzanne, Davies, Christopher, Williams, Alan, Turpaz, Yaron

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Cistrome: an integrative platform for transcriptional regulation studies de réir Liu, Tao, Ortiz, Jorge A, Taing, Len, Meyer, Clifford A, Lee, Bernett, Zhang, Yong, Shin, Hyunjin, Wong, Swee S, Ma, Jian, Lei, Ying, Pape, Utz J, Poidinger, Michael, Chen, Yiwen, Yeung, Kevin, Brown, Myles, Turpaz, Yaron, Liu, X Shirley

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Fast and accurate HLA typing from short-read next-generation sequence data with xHLA de réir Xie, Chao, Yeo, Zhen Xuan, Wong, Marie, Piper, Jason, Long, Tao, Kirkness, Ewen F., Biggs, William H., Bloom, Ken, Spellman, Stephen, Vierra-Green, Cynthia, Brady, Colleen, Scheuermann, Richard H., Telenti, Amalio, Howard, Sally, Brewerton, Suzanne, Turpaz, Yaron, Venter, J. Craig

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Massively parallel pathogen identification using high‐density microarrays de réir Berthet, Nicolas, Dickinson, Philip, Filliol, Ingrid, Reinhardt, Anita K., Batejat, Christophe, Vallaeys, Tatiana, Kong, Katherine A., Davies, Christopher, Lee, Walter, Zhang, Shenglan, Turpaz, Yaron, Heym, Beate, Coralie, Gilberte, Dacheux, Laurent, Burguière, Ana Maria, Bourhy, Hervé, Old, Iain G., Manuguerra, Jean‐Claude, Cole, Stewart T., Kennedy, Giulia C.

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CYP4F2 genetic variant alters required warfarin dose de réir Caldwell, Michael D., Awad, Tarif, Johnson, Julie A., Gage, Brian F., Falkowski, Mat, Gardina, Paul, Hubbard, Jason, Turpaz, Yaron, Langaee, Taimour Y., Eby, Charles, King, Cristi R., Brower, Amy, Schmelzer, John R., Glurich, Ingrid, Vidaillet, Humberto J., Yale, Steven H., Qi Zhang, Kai, Berg, Richard L., Burmester, James K.

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A gene expression signature of CD34(+) cells to predict major cytogenetic response in chronic-phase chronic myeloid leukemia patients treated with imatinib de réir McWeeney, Shannon K., Pemberton, Lucy C., Loriaux, Marc M., Vartanian, Kristina, Willis, Stephanie G., Yochum, Gregory, Wilmot, Beth, Turpaz, Yaron, Pillai, Raji, Druker, Brian J., Snead, Jennifer L., MacPartlin, Mary, O'Brien, Stephen G., Melo, Junia V., Lange, Thoralf, Harrington, Christina A., Deininger, Michael W. N.

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Deep sequencing of 10,000 human genomes de réir Telenti, Amalio, Pierce, Levi C. T., Biggs, William H., di Iulio, Julia, Wong, Emily H. M., Fabani, Martin M., Kirkness, Ewen F., Moustafa, Ahmed, Shah, Naisha, Xie, Chao, Brewerton, Suzanne C., Bulsara, Nadeem, Garner, Chad, Metzker, Gary, Sandoval, Efren, Perkins, Brad A., Och, Franz J., Turpaz, Yaron, Venter, J. Craig

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Using RNA sample titrations to assess microarray platform performance and normalization techniques de réir Shippy, Richard, Fulmer-Smentek, Stephanie, Jensen, Roderick V, Jones, Wendell D, Wolber, Paul K, Johnson, Charles D, Pine, P Scott, Boysen, Cecilie, Guo, Xu, Chudin, Eugene, Sun, Yongming Andrew, Willey, James C, Thierry-Mieg, Jean, Thierry-Mieg, Danielle, Setterquist, Robert A, Wilson, Mike, Lucas, Anne Bergstrom, Novoradovskaya, Natalia, Papallo, Adam, Turpaz, Yaron, Baker, Shawn C, Warrington, Janet A, Shi, Leming, Herman, Damir

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Use of a mixed tissue RNA design for performance assessments on multiple microarray formats de réir Thompson, Karol L., Rosenzweig, Barry A., Pine, P. Scott, Retief, Jacques, Turpaz, Yaron, Afshari, Cynthia A., Hamadeh, Hisham K., Damore, Michael A., Boedigheimer, Michael, Blomme, Eric, Ciurlionis, Rita, Waring, Jeffrey F., Fuscoe, James C., Paules, Richard, Tucker, Charles J., Fare, Thomas, Coffey, Ernest M., He, Yudong, Collins, Patrick J., Jarnagin, Kurt, Fujimoto, Susan, Ganter, Brigitte, Kiser, Gretchen, Kaysser-Kranich, Tamma, Sina, Joseph, Sistare, Frank D.

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Identification of individuals by trait prediction using whole-genome sequencing data de réir Lippert, Christoph, Sabatini, Riccardo, Maher, M. Cyrus, Kang, Eun Yong, Lee, Seunghak, Arikan, Okan, Harley, Alena, Bernal, Axel, Garst, Peter, Lavrenko, Victor, Yocum, Ken, Wong, Theodore, Zhu, Mingfu, Yang, Wen-Yun, Chang, Chris, Lu, Tim, Lee, Charlie W. H., Hicks, Barry, Ramakrishnan, Smriti, Tang, Haibao, Xie, Chao, Piper, Jason, Brewerton, Suzanne, Turpaz, Yaron, Telenti, Amalio, Roby, Rhonda K., Och, Franz J., Venter, J. Craig

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Precision medicine screening using whole-genome sequencing and advanced imaging to identify disease risk in adults de réir Perkins, Bradley A., Caskey, C. Thomas, Brar, Pamila, Dec, Eric, Karow, David S., Kahn, Andrew M., Hou, Ying-Chen Claire, Shah, Naisha, Boeldt, Debbie, Coughlin, Erin, Hands, Gabby, Lavrenko, Victor, Yu, James, Procko, Andrea, Appis, Julia, Dale, Anders M., Guo, Lining, Jönsson, Thomas J., Wittmann, Bryan M., Bartha, Istvan, Ramakrishnan, Smriti, Bernal, Axel, Brewer, James B., Brewerton, Suzanne, Biggs, William H., Turpaz, Yaron, Venter, J. Craig

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The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies de réir Shi, Leming, Jones, Wendell D, Jensen, Roderick V, Harris, Stephen C, Perkins, Roger G, Goodsaid, Federico M, Guo, Lei, Croner, Lisa J, Boysen, Cecilie, Fang, Hong, Qian, Feng, Amur, Shashi, Bao, Wenjun, Barbacioru, Catalin C, Bertholet, Vincent, Cao, Xiaoxi Megan, Chu, Tzu-Ming, Collins, Patrick J, Fan, Xiao-hui, Frueh, Felix W, Fuscoe, James C, Guo, Xu, Han, Jing, Herman, Damir, Hong, Huixiao, Kawasaki, Ernest S, Li, Quan-Zhen, Luo, Yuling, Ma, Yunqing, Mei, Nan, Peterson, Ron L, Puri, Raj K, Shippy, Richard, Su, Zhenqiang, Sun, Yongming Andrew, Sun, Hongmei, Thorn, Brett, Turpaz, Yaron, Wang, Charles, Wang, Sue Jane, Warrington, Janet A, Willey, James C, Wu, Jie, Xie, Qian, Zhang, Liang, Zhang, Lu, Zhong, Sheng, Wolfinger, Russell D, Tong, Weida

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