Bilaketaren emaitzak - Travers Ching

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  1. 1
    Power analysis and sample size estimation for RNA-Seq differential expression

    Power analysis and sample size estimation for RNA-Seq differential expression nork Travers Ching, Sijia Huang, Lana X. Garmire

    Argitaratua 2014
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  2. 2
    Cox-nnet: An artificial neural network method for prognosis prediction of high-throughput omics data

    Cox-nnet: An artificial neural network method for prognosis prediction of high-throughput omics data nork Travers Ching, Xun Zhu, Lana X. Garmire

    Argitaratua 2018
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  3. 3
    Using epigenomics data to predict gene expression in lung cancer

    Using epigenomics data to predict gene expression in lung cancer nork Jeffery Li, Travers Ching, Sijia Huang, Lana X. Garmire

    Argitaratua 2015
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  4. 4
    Single-Cell Transcriptomics Bioinformatics and Computational Challenges

    Single-Cell Transcriptomics Bioinformatics and Computational Challenges nork Olivier Poirion, Xun Zhu, Travers Ching, Lana X. Garmire

    Argitaratua 2016
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  5. 5
    Using single nucleotide variations in single-cell RNA-seq to identify subpopulations and genotype-phenotype linkage

    Using single nucleotide variations in single-cell RNA-seq to identify subpopulations and genotype-phenotype linkage nork Olivier Poirion, Xun Zhu, Travers Ching, Lana X. Garmire

    Argitaratua 2018
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  6. 6
    A Novel Model to Combine Clinical and Pathway-Based Transcriptomic Information for the Prognosis Prediction of Breast Cancer

    A Novel Model to Combine Clinical and Pathway-Based Transcriptomic Information for the Prognosis Prediction of Breast Cancer nork Sijia Huang, Cameron Yee, Travers Ching, Herbert Yu, Lana X. Garmire

    Argitaratua 2014
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  7. 7
    mirMark: a site-level and UTR-level classifier for miRNA target prediction

    mirMark: a site-level and UTR-level classifier for miRNA target prediction nork Mark Menor, Travers Ching, Xun Zhu, David Garmire, Lana X. Garmire

    Argitaratua 2014
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  8. 8
    Detecting heterogeneity in single-cell RNA-Seq data by non-negative matrix factorization

    Detecting heterogeneity in single-cell RNA-Seq data by non-negative matrix factorization nork Xun Zhu, Travers Ching, Xinghua Pan, Sherman M. Weissman, Lana X. Garmire

    Argitaratua 2017
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  9. 9
    Multimodal Meta-Analysis of 1,494 Hepatocellular Carcinoma Samples Reveals Significant Impact of Consensus Driver Genes on Phenotypes

    Multimodal Meta-Analysis of 1,494 Hepatocellular Carcinoma Samples Reveals Significant Impact of Consensus Driver Genes on Phenotypes nork Kumardeep Chaudhary, Olivier Poirion, Liangqun Lu, Sijia Huang, Travers Ching, Lana X. Garmire

    Argitaratua 2018
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  10. 10
    Genome-wide hypermethylation coupled with promoter hypomethylation in the chorioamniotic membranes of early onset pre-eclampsia

    Genome-wide hypermethylation coupled with promoter hypomethylation in the chorioamniotic membranes of early onset pre-eclampsia nork Travers Ching, Min‐Ae Song, Maarit Tiirikainen, János Molnár, Marla J. Berry, Dena Towner, Lana X. Garmire

    Argitaratua 2014
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  11. 11
    Genome-scale hypomethylation in the cord blood DNAs associated with early onset preeclampsia

    Genome-scale hypomethylation in the cord blood DNAs associated with early onset preeclampsia nork Travers Ching, James C. Ha, Min‐Ae Song, Maarit Tiirikainen, János Molnár, Marla J. Berry, Dena Towner, Lana X. Garmire

    Argitaratua 2015
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  12. 12
    Pan-Cancer Analyses Reveal Long Intergenic Non-Coding RNAs Relevant to Tumor Diagnosis, Subtyping and Prognosis

    Pan-Cancer Analyses Reveal Long Intergenic Non-Coding RNAs Relevant to Tumor Diagnosis, Subtyping and Prognosis nork Travers Ching, Karolina Peplowska, Sijia Huang, Xun Zhu, Yi Shen, János Molnár, Herbert Yu, Maarit Tiirikainen, Ben Fogelgren, Rong Fan, Lana X. Garmire

    Argitaratua 2016
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  13. 13
    Analysis of Microarray Data on Gene Expression and Methylation to Identify Long Non-coding RNAs in Non-small Cell Lung Cancer

    Analysis of Microarray Data on Gene Expression and Methylation to Identify Long Non-coding RNAs in Non-small Cell Lung Cancer nork Nannan Feng, Travers Ching, Yu Wang, Ben Liu, Hongyan Lin, Oumin Shi, Xiaohong Zhang, Min Zheng, Xin Zheng, Ming Gao, Zhi-Jie Zheng, Herbert Yu, Lana X. Garmire, Biyun Qian

    Argitaratua 2016
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  14. 14
    Alternative splicing promotes tumour aggressiveness and drug resistance in African American prostate cancer

    Alternative splicing promotes tumour aggressiveness and drug resistance in African American prostate cancer nork Bi‐Dar Wang, Kristin Ceniccola, SuJin Hwang, Ramez Andrawis, Anélia Horvath, Jennifer A. Freedman, Jacqueline Olender, Stefan Knapp, Travers Ching, Lana X. Garmire, Vyomesh Patel, Mariano A. Garcia‐Blanco, Steven R. Patierno, Norman H. Lee

    Argitaratua 2017
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  15. 15
    Minimal Residual Disease Dynamics after Venetoclax-Obinutuzumab Treatment: Extended Off-Treatment Follow-up From the Randomized CLL14 Study

    Minimal Residual Disease Dynamics after Venetoclax-Obinutuzumab Treatment: Extended Off-Treatment Follow-up From the Randomized CLL14 Study nork Othman Al‐Sawaf, Can Zhang, Tong Lu, Michael Z. Liao, Anesh Panchal, Sandra Robrecht, Travers Ching, Maneesh Tandon, Anna‐Maria Fink, Eugen Tausch, Christof Schneider, Matthias Ritgen, Sebastian Böttcher, Karl‐Anton Kreuzer, Brenda Chyla, Dale Miles, Clemens‐Martin Wendtner, Barbara Eichhorst, Stephan Stilgenbauer, Yanwen Jiang, Michael Hallek, Kirsten Fischer

    Argitaratua 2021
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  16. 16
    Analytical evaluation of the clonoSEQ Assay for establishing measurable (minimal) residual disease in acute lymphoblastic leukemia, chronic lymphocytic leukemia, and multiple myeloma

    Analytical evaluation of the clonoSEQ Assay for establishing measurable (minimal) residual disease in acute lymphoblastic leukemia, chronic lymphocytic leukemia, and multiple myelo... nork Travers Ching, Megan E. Duncan, Tera Newman-Eerkes, Mollie McWhorter, Jeffrey M. Tracy, Michelle S. Steen, Ryan P. Brown, Srivatsa Venkatasubbarao, Nicholas K. Akers, Marissa Vignali, Martin Moorhead, Drew Watson, Ryan Emerson, Tobias Mann, B. Melina Cimler, Pamela L. Swatkowski, Ilan R. Kirsch, Charles Sang, Harlan Robins, Bryan Howie, Anna Sherwood

    Argitaratua 2020
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  17. 17
    Th17 cells transdifferentiate into regulatory T cells during resolution of inflammation

    Th17 cells transdifferentiate into regulatory T cells during resolution of inflammation nork Nicola Gagliani, María Carolina Amezcua Vesely, Andrea Iseppon, Leonie Brockmann, Hao Xu, Noah W. Palm, Marcel R. de Zoete, Paula Licona-Limón, Ricardo Paiva, Travers Ching, Casey T. Weaver, Xiaoyuan Zi, Xinghua Pan, Rong Fan, Lana X. Garmire, Matthew J. Cotton, Yotam Drier, B Bernstein, Jens Geginat, Brigitta Stockinger, Enric Esplugues, Samuel Huber, Richard A. Flavell

    Argitaratua 2015
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  18. 18
    Opportunities and obstacles for deep learning in biology and medicine

    Opportunities and obstacles for deep learning in biology and medicine nork Travers Ching, Daniel Himmelstein, Brett K. Beaulieu‐Jones, Alexandr A. Kalinin, T. Brian, Gregory P. Way, Enrico Ferrero, Paul‐Michael Agapow, Michael Zietz, Michael M. Hoffman, Wei Xie, Gail Rosen, Benjamin J. Lengerich, Johnny Israeli, Jack Lanchantin, Stephen Woloszynek, Anne E. Carpenter, Avanti Shrikumar, Jinbo Xu, Evan M. Cofer, Christopher A. Lavender, Srinivas C. Turaga, Amr M. Alexandari, Zhiyong Lu, David J. Harris, David DeCaprio, Yanjun Qi, Anshul Kundaje, Yifan Peng, Laura K. Wiley, Marwin Segler, Simina M. Boca, S. Joshua Swamidass, Austin Huang, Anthony Gitter, Casey S. Greene

    Argitaratua 2018
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