Søgeresultater - Timothy Durham

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  1. 1
    Avocado: a multi-scale deep tensor factorization method learns a latent representation of the human epigenome

    Avocado: a multi-scale deep tensor factorization method learns a latent representation of the human epigenome af Jacob Schreiber, Timothy Durham, Jeffrey A. Bilmes, William Stafford Noble

    Udgivet 2020
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  2. 2
    Functional characterization of enhancer evolution in the primate lineage

    Functional characterization of enhancer evolution in the primate lineage af Jason C. Klein, Aidan Keith, Vikram Agarwal, Timothy Durham, Jay Shendure

    Udgivet 2018
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  3. 3
    Single-cell analysis reveals context-dependent, cell-level selection of mtDNA

    Single-cell analysis reveals context-dependent, cell-level selection of mtDNA af Anna V. Kotrys, Timothy Durham, Xiaoyan A. Guo, Venkata R. Vantaku, Sareh Parangi, Vamsi K. Mootha

    Udgivet 2024
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  4. 4
    Hypoxia extends lifespan and neurological function in a mouse model of aging

    Hypoxia extends lifespan and neurological function in a mouse model of aging af Robert S. Rogers, Hong Wang, Timothy Durham, Jonathan A. Stefely, Norah Owiti, Andrew L. Markhard, L Sandler, Tsz‐Leung To, Vamsi K. Mootha

    Udgivet 2023
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  5. 5
    Inferring Causal Gene Regulatory Networks from Coupled Single-Cell Expression Dynamics Using Scribe

    Inferring Causal Gene Regulatory Networks from Coupled Single-Cell Expression Dynamics Using Scribe af Xiaojie Qiu, Arman Rahimzamani, Li Wang, Bingcheng Ren, Qi Mao, Timothy Durham, José L. McFaline‐Figueroa, Lauren M. Saunders, Cole Trapnell, Sreeram Kannan

    Udgivet 2020
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  6. 6
    Mapping and analysis of chromatin state dynamics in nine human cell types

    Mapping and analysis of chromatin state dynamics in nine human cell types af Jason Ernst, Pouya Kheradpour, Tarjei S. Mikkelsen, Noam Shoresh, Lucas D. Ward, Charles B. Epstein, Xiaolan Zhang, Li Wang, Robbyn Issner, Michael J. Coyne, Manching Ku, Timothy Durham, Manolis Kellis, B Bernstein

    Udgivet 2011
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  7. 7
    Nuclear genetic control of mtDNA copy number and heteroplasmy in humans

    Nuclear genetic control of mtDNA copy number and heteroplasmy in humans af Rahul Gupta, Masahiro Kanai, Timothy Durham, Kristin Tsuo, Jason G. McCoy, Anna V. Kotrys, Wei Zhou, Patrick F. Chinnery, Konrad J. Karczewski, Sarah E. Calvo, Benjamin M. Neale, Vamsi K. Mootha

    Udgivet 2023
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  8. 8
    Combinatorial Patterning of Chromatin Regulators Uncovered by Genome-wide Location Analysis in Human Cells

    Combinatorial Patterning of Chromatin Regulators Uncovered by Genome-wide Location Analysis in Human Cells af Oren Ram, Alon Goren, Ido Amit, Noam Shoresh, Nir Yosef, Jason Ernst, Manolis Kellis, Melissa Gymrek, Robbyn Issner, Michael J. Coyne, Timothy Durham, Xiaolan Zhang, Julie Donaghey, Charles B. Epstein, Aviv Regev, B Bernstein

    Udgivet 2011
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  9. 9
    Circulating N-lactoyl-amino acids and N-formyl-methionine reflect mitochondrial dysfunction and predict mortality in septic shock

    Circulating N-lactoyl-amino acids and N-formyl-methionine reflect mitochondrial dysfunction and predict mortality in septic shock af Robert S. Rogers, Rohit Sharma, Hardik B. Shah, Owen S. Skinner, Xiaoyan A. Guo, Apekshya Panda, Rahul Gupta, Timothy Durham, Kelsey B Shaughnessy, Jared R. Mayers, Kathryn A. Hibbert, Rebecca M. Baron, Bruce Thompson, Vamsi K. Mootha

    Udgivet 2024
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  10. 10
    Genome-wide Chromatin State Transitions Associated with Developmental and Environmental Cues

    Genome-wide Chromatin State Transitions Associated with Developmental and Environmental Cues af Jiang Zhu, Mazhar Adli, James Zou, Griet Verstappen, Michael J. Coyne, Xiaolan Zhang, Timothy Durham, Mohammad Reza Miri, Vikram Deshpande, Philip L. De Jager, David A. Bennett, Joseph A. Houmard, Deborah M. Muoio, Tamer T. Önder, Ray Camahort, Chad A. Cowan, Alexander Meissner, Charles B. Epstein, Noam Shoresh, B Bernstein

    Udgivet 2013
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  11. 11
    The ModERN Resource: Genome-Wide Binding Profiles for Hundreds of<i>Drosophila</i>and<i>Caenorhabditis elegans</i>Transcription Factors

    The ModERN Resource: Genome-Wide Binding Profiles for Hundreds of<i>Drosophila</i>and<i>Caenorhabditis elegans</i>Transcription Factors af Michelle Kudron, Alec Victorsen, Louis Gevirtzman, LaDeana Hillier, William W. Fisher, Dionne Vafeados, Matt Kirkey, Ann S. Hammonds, Jeffery Gersch, Haneen Ammouri, Martha Wall, Jennifer Moran, David L. Steffen, Matt Szynkarek, Samantha Seabrook-Sturgis, Nader Jameel, Madhura Kadaba, Jaeda Patton, Robert Terrell, Mitch Corson, Timothy Durham, Soo Hyung Park, Swapna Samanta, Han Mei, Jinrui Xu, Koon‐Kiu Yan, S Celniker, Kevin P. White, Lijia Ma, Mark Gerstein, V Reinke, R Waterston

    Udgivet 2017
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  12. 12
    MitoCarta3.0: an updated mitochondrial proteome now with sub-organelle localization and pathway annotations

    MitoCarta3.0: an updated mitochondrial proteome now with sub-organelle localization and pathway annotations af Sneha Rath, Rohit Sharma, Rahul Gupta, Tslil Ast, Connie Chan, Timothy Durham, Russell P. Goodman, Zenon Grabarek, Mary E. Haas, Wendy H.W. Hung, Pallavi R. Joshi, Alexis A. Jourdain, Sharon H. Kim, Anna V. Kotrys, Stephanie S Lam, Jason G. McCoy, Joshua D. Meisel, María Miranda, Apekshya Panda, Anupam Patgiri, Robert Rogers, Shayan Sadre, Hardik Shah, Owen S. Skinner, Tsz-Leung To, Melissa Walker, Hong Wang, Patrick S. Ward, Jordan Wengrod, Chen‐Ching Yuan, Sarah E. Calvo, Vamsi K. Mootha

    Udgivet 2020
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