Search Results - Thanneer M. Perumal

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  1. 1
    Gene Regulatory Network Inference of Immunoresponsive Gene 1 (IRG1) Identifies Interferon Regulatory Factor 1 (IRF1) as Its Transcriptional Regulator in Mammalian Macrophages

    Gene Regulatory Network Inference of Immunoresponsive Gene 1 (IRG1) Identifies Interferon Regulatory Factor 1 (IRF1) as Its Transcriptional Regulator in Mammalian Macrophages by Aravind Tallam, Thanneer M. Perumal, Paul Antony, Christian Jäger, Joëlle V. Fritz, Laurent Vallar, Rudi Balling, Antonio del Sol, Alessandro Michelucci

    Published 2016
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  2. 2
    Integrating Pathways of Parkinson's Disease in a Molecular Interaction Map

    Integrating Pathways of Parkinson's Disease in a Molecular Interaction Map by Kazuhiro Fujita, Marek Ostaszewski, Yukiko Matsuoka, Samik Ghosh, Enrico Glaab, Christophe Trefois, Isaac Crespo, Thanneer M. Perumal, Wiktor Jurkowski, Paul Antony, Nico J. Diederich, Manuel Buttini, Akihiko Kodama, Venkata Satagopam, Serge Eifes, Antonio del Sol, Reinhard Schneider, Hiroaki Kitano, Rudi Balling

    Published 2013
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  3. 3
    A novel systems biology approach to evaluate mouse models of late-onset Alzheimer’s disease

    A novel systems biology approach to evaluate mouse models of late-onset Alzheimer’s disease by Christoph Preuß, Ravi S. Pandey, Erin Piazza, Alexander D. Fine, Aslı Uyar, Thanneer M. Perumal, Dylan Garceau, Kevin P. Kotredes, Harriet M. Williams, Lara M. Mangravite, Bruce T. Lamb, Adrian L. Oblak, Gareth R. Howell, Michael Sasner, Benjamin A. Logsdon, Gregory W. Carter

    Published 2020
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  4. 4
    Identifying drug targets for neurological and psychiatric disease via genetics and the brain transcriptome

    Identifying drug targets for neurological and psychiatric disease via genetics and the brain transcriptome by Denis Baird, Jimmy Z. Liu, Jie Zheng, Solveig K. Sieberts, Thanneer M. Perumal, Benjamin Elsworth, Tom G. Richardson, Chia‐Yen Chen, Minerva M. Carrasquillo, Mariet Allen, Joseph S. Reddy, Philip L. De Jager, Nilüfer Ertekin‐Taner, Lara M. Mangravite, Ben Logsdon, Karol Estrada, Philip Haycock, Gibran Hemani, Heiko Runz, George Davey Smith, Tom R. Gaunt

    Published 2021
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  5. 5
    Molecular, phenotypic, and sample-associated data to describe pluripotent stem cell lines and derivatives

    Molecular, phenotypic, and sample-associated data to describe pluripotent stem cell lines and derivatives by Kenneth Daily, Shannan J. Ho Sui, Lynn M. Schriml, Phillip J. Dexheimer, Nathan Salomonis, Robin Schroll, Stacy Bush, Mehdi Keddache, Christopher N. Mayhew, Samad Lotia, Thanneer M. Perumal, Kristen K. Dang, Lorena Pantano, Alexander R. Pico, Elke Grassman, Diana Nordling, Yoshihide Hayashizaki, Antonis K. Hatzopoulos, Punam Malik, José A. Cancelas, Carolyn Lutzko, Bruce J. Aronow, Larsson Omberg

    Published 2017
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  6. 6
    Remote smartphone monitoring of Parkinson’s disease and individual response to therapy

    Remote smartphone monitoring of Parkinson’s disease and individual response to therapy by Larsson Omberg, Elias Chaibub Neto, Thanneer M. Perumal, Abhishek Pratap, Aryton Tediarjo, Jamie Adams, Bastiaan R. Bloem, Brian M. Bot, Molly J. Elson, Samuel M. Goldman, Michael Kellen, Karl Kieburtz, Arno Klein, Max A. Little, Ruth B. Schneider, Christine Suver, Christopher G. Tarolli, Caroline M. Tanner, Andrew D. Trister, John Wilbanks, E. Ray Dorsey, Lara M. Mangravite

    Published 2021
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  7. 7
    Unsupervised Analysis of Transcriptomics in Bacterial Sepsis Across Multiple Datasets Reveals Three Robust Clusters

    Unsupervised Analysis of Transcriptomics in Bacterial Sepsis Across Multiple Datasets Reveals Three Robust Clusters by Timothy E. Sweeney, Tej D. Azad, Michele Donato, Winston Haynes, Thanneer M. Perumal, Ricardo Henao, Jesús F. Bermejo-Martín, Raquel Almansa, Eduardo Tamayo, Judith A. Howrylak, Augustine M.K. Choi, Grant P. Parnell, Benjamin Tang, Marshall Nichols, Christopher W. Woods, Geoffrey S. Ginsburg, Stephen F. Kingsmore, Larsson Omberg, Lara M. Mangravite, Hector R. Wong, Ephraim L. Tsalik, Raymond J. Langley, Purvesh Khatri

    Published 2018
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  8. 8
    A community approach to mortality prediction in sepsis via gene expression analysis

    A community approach to mortality prediction in sepsis via gene expression analysis by Timothy E. Sweeney, Thanneer M. Perumal, Ricardo Henao, Marshall Nichols, Judith A. Howrylak, Augustine M.K. Choi, Jesús F. Bermejo-Martín, Raquel Almansa, Eduardo Tamayo, Emma E. Davenport, Katie L. Burnham, Charles Hinds, Julian C. Knight, Christopher W. Woods, Stephen F. Kingsmore, Geoffrey S. Ginsburg, Hector R. Wong, Grant P. Parnell, Benjamin Tang, Lyle L. Moldawer, Frederick Moore, Larsson Omberg, Purvesh Khatri, Ephraim L. Tsalik, Lara M. Mangravite, Raymond J. Langley

    Published 2018
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  9. 9
    Large-Scale Identification of Common Trait and Disease Variants Affecting Gene Expression

    Large-Scale Identification of Common Trait and Disease Variants Affecting Gene Expression by Mads E. Hauberg, Wen Zhang, Claudia Giambartolomei, Oscar Franzén, David Morris, Timothy J. Vyse, Arno Ruusalepp, Pamela Sklar, Eric E. Schadt, Johan Björkegren, Panos Roussos, Menachem Fromer, Solveig K. Sieberts, Jessica Johnson, Douglas M. Ruderfer, Hardik Shah, Lambertus Klei, Kristen K. Dang, Thanneer M. Perumal, Benjamin A. Logsdon, Milind Mahajan, Lara M. Mangravite, Laurent Essioux, Hiroyoshi Toyoshiba, Raquel E. Gur, Chang-Gyu Hahn, David A. Lewis, Vahram Haroutunian, Mette A. Peters, Barbara K. Lipska, Joseph D. Buxbaum, Keisuke Hirai, Enrico Domenici, Bernie Devlin

    Published 2017
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  10. 10
    Landscape of Conditional eQTL in Dorsolateral Prefrontal Cortex and Co-localization with Schizophrenia GWAS

    Landscape of Conditional eQTL in Dorsolateral Prefrontal Cortex and Co-localization with Schizophrenia GWAS by Amanda Dobbyn, Laura M. Huckins, James Boocock, Laura Sloofman, Benjamin S. Glicksberg, Claudia Giambartolomei, Gabriel E. Hoffman, Thanneer M. Perumal, Kiran Girdhar, Yan Jiang, Towfique Raj, Douglas M. Ruderfer, Robin S. S. Kramer, Dalila Pinto, Schahram Akbarian, Panos Roussos, Enrico Domenici, Bernie Devlin, Pamela Sklar, Eli A. Stahl, Solveig K. Sieberts, Pamela Sklar, Joseph D. Buxbaum, Bernie Devlin, David A. Lewis, Raquel E. Gur, Chang-Gyu Hahn, Keisuke Hirai, Hiroyoshi Toyoshiba, Enrico Domenici, Laurent Essioux, Lara M. Mangravite, Mette A. Peters, Thomas Lehner, Barbara K. Lipska, A. Ercüment Çiçek, Cong Lu, Kathryn Roeder, Lu Xie, Konrad Talbot, Scott E. Hemby, Laurent Essioux, Andrew Browne, Andrew Chess, Aaron Topol, Alexander W. Charney, Amanda Dobbyn, Ben Readhead, Bin Zhang, Dalila Pinto, David A. Bennett, David H. Kavanagh, Douglas M. Ruderfer, Eli A. Stahl, Eric E. Schadt, Gabriel E. Hoffman, Hardik Shah, Jun Zhu, Jessica Johnson, John F. Fullard, Joel T. Dudley, Kiran Girdhar, Kristen Brennand, Laura Sloofman, Laura M. Huckins, Menachem Fromer, Milind Mahajan, Panos Roussos, Schahram Akbarian, Shaun Purcell, Tymor Hamamsy, Towfique Raj, Vahram Haroutunian, Ying‐Chih Wang, Zeynep H. Gümüş, Geetha Senthil, Robin S. S. Kramer, Benjamin A. Logsdon, Jonathan M.J. Derry, Kristen K. Dang, Solveig K. Sieberts, Thanneer M. Perumal, Roberto Visintainer, Leslie A. Shinobu, Patrick F. Sullivan, Lambertus Klei

    Published 2018
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  11. 11
    Meta-analysis of the human brain transcriptome identifies heterogeneity across human AD coexpression modules robust to sample collection and methodological approach

    Meta-analysis of the human brain transcriptome identifies heterogeneity across human AD coexpression modules robust to sample collection and methodological approach by Benjamin A. Logsdon, Thanneer M. Perumal, Vivek Swarup, Minghui Wang, Cory C. Funk, Chris Gaiteri, Mariet Allen, Xue Wang, Eric B. Dammer, Gyan Srivastava, Sumit Mukherjee, Solveig K. Sieberts, Larsson Omberg, Kristen D. Dang, James A. Eddy, Phil Snyder, Yooree Chae, Sandeep Amberkar, Wenbin Wei, Yoshihide Hayashizaki, Christoph Preuß, Ayla Ergün, Phillip J. Ebert, David Airey, Gregory W. Carter, Sara Mostafavi, Lei Yu, Hans‐Ulrich Klein, David Collier, Todd E. Golde, Allan I. Levey, David A. Bennett, Karol Estrada, Michael Decker, Zhandong Liu, Joshua M. Shulman, Bin Zhang, Eric E. Schadt, Phillip L. De Jager, Nathan D. Price, Nilüfer Ertekin‐Taner, Lara M. Mangravite

    Published 2019
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  12. 12
    Gene Expression Elucidates Functional Impact of Polygenic Risk for Schizophrenia

    Gene Expression Elucidates Functional Impact of Polygenic Risk for Schizophrenia by Menachem Fromer, Panos Roussos, Solveig K. Sieberts, Jessica Johnson, David H. Kavanagh, Thanneer M. Perumal, Douglas M. Ruderfer, Edwin C. Oh, Aaron Topol, Hardik Shah, Lambertus Klei, Robin S. S. Kramer, Dalila Pinto, Zeynep H. Gümüş, A. Ercüment Çiçek, Kristen K. Dang, Andrew Browne, Cong Lu, Li Xie, Ben Readhead, Eli A. Stahl, Mahsa Parvisi, Tymor Hamamsy, John F. Fullard, Ying‐Chih Wang, Milind Mahajan, Jonathan M.J. Derry, Joel T. Dudley, Scott E. Hemby, Benjamin A. Logsdon, Konrad Talbot, Towfique Raj, David A. Bennett, Phil L. De Jager, Jun Zhu, Bin Zhang, Patrick F. Sullivan, Andrew Chess, Shaun Purcell, Leslie A. Shinobu, Lara M. Mangravite, Hiroyoshi Toyoshiba, Raquel E. Gur, Chang-Gyu Hahn, David A. Lewis, Vahram Haroutonian, Mette A. Peters, Barbara K. Lipska, Joseph D. Buxbaum, Eric E. Schadt, Keisuke Hirai, Kathryn Roeder, Kristen Brennand, Nicholas Katsanis, Enrico Dominici, Bernie Devlin, Pamela Sklar

    Published 2016
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  13. 13
    Gene expression elucidates functional impact of polygenic risk for schizophrenia

    Gene expression elucidates functional impact of polygenic risk for schizophrenia by Menachem Fromer, Panos Roussos, Solveig K. Sieberts, Jessica Johnson, David H. Kavanagh, Thanneer M. Perumal, Douglas M. Ruderfer, Edwin C. Oh, Aaron Topol, Hardik Shah, Lambertus Klei, Robin S. S. Kramer, Dalila Pinto, Zeynep H. Gümüş, A. Ercüment Çiçek, Kristen K. Dang, Andrew Browne, Cong Lu, Lu Xie, Ben Readhead, Eli A. Stahl, Jianqiu Xiao, Mahsa Parvizi, Tymor Hamamsy, John F. Fullard, Ying‐Chih Wang, Milind Mahajan, Jonathan M.J. Derry, Joel T. Dudley, Scott E. Hemby, Benjamin A. Logsdon, Konrad Talbot, Towfique Raj, David A. Bennett, Philip L. De Jager, Jun Zhu, Bin Zhang, Patrick F. Sullivan, Andrew Chess, Shaun Purcell, Leslie A. Shinobu, Lara M. Mangravite, Hiroyoshi Toyoshiba, Raquel E. Gur, Chang-Gyu Hahn, David A. Lewis, Vahram Haroutunian, Mette A. Peters, Barbara K. Lipska, Joseph D. Buxbaum, Eric E. Schadt, Keisuke Hirai, Kathryn Roeder, Kristen Brennand, Nicholas Katsanis, Enrico Domenici, Bernie Devlin, Pamela Sklar

    Published 2016
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  14. 14
    Meta-Analysis of the Alzheimer’s Disease Human Brain Transcriptome and Functional Dissection in Mouse Models

    Meta-Analysis of the Alzheimer’s Disease Human Brain Transcriptome and Functional Dissection in Mouse Models by Ying‐Wooi Wan, Rami Al‐Ouran, Carl Grant Mangleburg, Thanneer M. Perumal, Tom V. Lee, Katherine Allison, Vivek Swarup, Cory C. Funk, Chris Gaiteri, Mariet Allen, Minghui Wang, Sarah M. Neuner, Catherine C. Kaczorowski, Vivek M. Philip, Gareth R. Howell, Heidi Martini‐Stoica, Hui Zheng, Hongkang Mei, Xiaoyan Zhong, Jungwoo Wren Kim, Valina L. Dawson, Ted M. Dawson, Ping‐Chieh Pao, Li‐Huei Tsai, Jean‐Vianney Haure‐Mirande, Michelle E. Ehrlich, Paramita Chakrabarty, Yona Levites, Xue Wang, Eric B. Dammer, Gyan Srivastava, Sumit Mukherjee, Solveig K. Sieberts, Larsson Omberg, Kristen K. Dang, James A. Eddy, Phil Snyder, Yooree Chae, Sandeep Amberkar, Wenbin Wei, Yoshihide Hayashizaki, Christoph Preuß, Ayla Ergün, Phillip J. Ebert, David Airey, Sara Mostafavi, Lei Yu, Hans‐Ulrich Klein, Gregory W. Carter, David Collier, Todd E. Golde, Allan I. Levey, David A. Bennett, Karol Estrada, T. Matthew Townsend, Bin Zhang, Eric E. Schadt, Philip L. De Jager, Nathan D. Price, Nilüfer Ertekin‐Taner, Zhandong Liu, Joshua M. Shulman, Lara M. Mangravite, Benjamin A. Logsdon

    Published 2020
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  15. 15
    Functional annotation of rare structural variation in the human brain

    Functional annotation of rare structural variation in the human brain by Lide Han, Xuefang Zhao, Mary Lauren Benton, Thanneer M. Perumal, Ryan L. Collins, Gabriel E. Hoffman, Jessica Johnson, Laura Sloofman, Harold Z. Wang, Matthew R. Stone, Schahram Akbarian, Jaroslav Bendl, Michael S. Breen, Kristen Brennand, Leanne Brown, Andrew Browne, Joseph D. Buxbaum, Alexander W. Charney, Andrew Chess, Lizette Couto, Greg Crawford, Olivia Devillers, Bernie Devlin, Amanda Dobbyn, Enrico Domenici, Michele Filosi, Elie Flatow, Nancy Francoeur, John F. Fullard, Sergio Espeso‐Gil, Kiran Girdhar, Attila Gulyás-Kovács, Raquel E. Gur, Chang-Gyu Hahn, Vahram Haroutunian, Mads E. Hauberg, Laura M. Huckins, Rivky Jacobov, Yan Jiang, Jessica Johnson, Bibi Kassim, Yungil Kim, Lambertus Klei, Robin S. S. Kramer, Mario Lauria, Thomas Lehner, David A. Lewis, Barbara K. Lipska, Kelsey S. Montgomery, Royce Park, Chaggai Rosenbluh, Panos Roussos, Douglas M. Ruderfer, Geetha Senthil, Hardik Shah, Laura Sloofman, Lingyun Song, Eli Stahl, Patrick Sullivan, Roberto Visintainer, Jiebiao Wang, Ying‐Chih Wang, Jennifer Wiseman, Eva Xia, Wen Zhang, Elizabeth Zharovsky, Kristen Brennand, Harrison Brand, Solveig K. Sieberts, Stefano Marenco, Mette A. Peters, Barbara K. Lipska, Panos Roussos, John A. Capra, Michael E. Talkowski, Douglas M. Ruderfer

    Published 2020
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  16. 16
    Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions

    Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions by Solveig K. Sieberts, Thanneer M. Perumal, Minerva M. Carrasquillo, Mariet Allen, Joseph S. Reddy, Gabriel E. Hoffman, Kristen K. Dang, John Calley, Philip J. Ebert, James A. Eddy, Xue Wang, Anna K. Greenwood, Sara Mostafavi, Schahram Akbarian, Jaroslav Bendl, Michael S. Breen, Kristen Brennand, Leanne Brown, Andrew Browne, Joseph D. Buxbaum, Alexander W. Charney, Andrew Chess, Lizette Couto, Greg Crawford, Olivia Devillers, Bernie Devlin, Amanda Dobbyn, Enrico Domenici, Michele Filosi, Elie Flatow, Nancy Francoeur, John F. Fullard, Sergio Espeso‐Gil, Kiran Girdhar, Attila Gulyás-Kovács, Raquel E. Gur, Chang-Gyu Hahn, Vahram Haroutunian, Mads E. Hauberg, Laura M. Huckins, Rivky Jacobov, Yan Jiang, Jessica Johnson, Bibi Kassim, Yungil Kim, Lambertus Klei, Robin S. S. Kramer, Mario Lauria, Thomas Lehner, David A. Lewis, Barbara K. Lipska, Kelsey S. Montgomery, Royce Park, Chaggai Rosenbluh, Panagiotis Roussos, Douglas M. Ruderfer, Geetha Senthil, Hardik Shah, Laura Sloofman, Lingyun Song, Eli Stahl, Patrick Sullivan, Roberto Visintainer, Jiebiao Wang, Ying‐Chih Wang, Jennifer Wiseman, Eva Xia, Wen Zhang, Elizabeth Zharovsky, Laura Addis, Sadiya N. Addo, David Airey, Matthias Arnold, David A. Bennett, Yingtao Bi, Knut Biber, Colette Blach, Elizabeth Bradhsaw, Paul E. Brennan, Rosa Canet-Aviles, Sherry Cao, Anna Cavalla, Yooree Chae, William W. Chen, Jie Cheng, David Collier, Jeffrey L. Dage, Eric B. Dammer, J. Wade Davis, John B. Davis, Derek Drake, Duc M. Duong, Brian J. Eastwood, Michelle E. Ehrlich, Benjamin M. Ellingson, Brett W. Engelmann, Sahar Esmaeeli-Nieh, Daniel Felsky, Cory C. Funk, Chris Gaiteri

    Published 2020
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