Search Results - Terence D. Murphy

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  1. 1
    Gene: a gene-centered information resource at NCBI

    Gene: a gene-centered information resource at NCBI by Garth Brown, Vichet Hem, Kenneth Katz, Michael Ovetsky, Craig Wallin, Olga Ermolaeva, Igor Tolstoy, Tatiana Tatusova, Kim D. Pruitt, Donna Maglott, Terence D. Murphy

    Published 2014
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  2. 2
    AphidBase: a centralized bioinformatic resource for annotation of the pea aphid genome

    AphidBase: a centralized bioinformatic resource for annotation of the pea aphid genome by Fabrice Legeai, Shuji Shigenobu, Jean-Pierre Gauthier, John K. Colbourne, Claude Rispe, Olivier Collin, Stephen Richards, Alex C. C. Wilson, Terence D. Murphy, Denis Tagu

    Published 2010
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  3. 3
    BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum

    BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum by Hee Shin Kim, Terence D. Murphy, Jing Xia, Doina Caragea, Yoonseong Park, Richard W. Beeman, Marcé D. Lorenzen, Stephen Butcher, J. Robert Manak, Susan J. Brown

    Published 2009
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  4. 4
    Assembly: a resource for assembled genomes at NCBI

    Assembly: a resource for assembled genomes at NCBI by Paul Kitts, Deanna M. Church, Françoise Thibaud‐Nissen, Jinna Choi, Vichet Hem, Victor Sapojnikov, Robert G. Smith, Tatiana Tatusova, Charlie Xiang, Andrey Zherikov, Michael DiCuccio, Terence D. Murphy, Kim D. Pruitt, Avi Kimchi

    Published 2015
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  5. 5
    Dog10K_Boxer_Tasha_1.0: A Long-Read Assembly of the Dog Reference Genome

    Dog10K_Boxer_Tasha_1.0: A Long-Read Assembly of the Dog Reference Genome by Vidhya Jagannathan, Christophe Hitte, Jeffrey M. Kidd, Patrick Masterson, Terence D. Murphy, Sarah B. Emery, Brian W. Davis, Reuben M. Buckley, Liu Yan-hu, Xiangquan Zhang, Tosso Leeb, Ya‐Ping Zhang, Elaine A. Ostrander, Guodong Wang

    Published 2021
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  6. 6
    Chromosome-level assembly of the water buffalo genome surpasses human and goat genomes in sequence contiguity

    Chromosome-level assembly of the water buffalo genome surpasses human and goat genomes in sequence contiguity by Wai Yee Low, Rick Tearle, Derek M. Bickhart, Benjamin D. Rosen, Sarah B. Kingan, Thomas Swale, Françoise Thibaud‐Nissen, Terence D. Murphy, Rachel Young, Lucas Lefèvre, David Hume, Andrew Collins, Paolo Ajmone‐Marsan, Timothy P. L. Smith, J. L. Williams

    Published 2019
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  7. 7
    The Carnegie Protein Trap Library: A Versatile Tool for Drosophila Developmental Studies

    The Carnegie Protein Trap Library: A Versatile Tool for Drosophila Developmental Studies by Michael Buszczak, Shelley Paterno, Daniel V. Lighthouse, Julia L. Bachman, Jamie L. Planck, Stephenie Owen, Andrew D. Skora, Todd Nystul, Benjamin Ohlstein, Anna K. Allen, James E. Wilhelm, Terence D. Murphy, Robert Levis, Erika Matunis, Nahathai Srivali, Roger A. Hoskins, Allan C. Spradling

    Published 2006
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  8. 8
    Rapid and sensitive detection of genome contamination at scale with FCS-GX

    Rapid and sensitive detection of genome contamination at scale with FCS-GX by Alexander Astashyn, Eric S. Tvedte, Deacon Sweeney, Victor Sapojnikov, Nathan Bouk, Victor Joukov, Eyal Mozes, Pooja K Strope, Pape M. Sylla, Lukas Wagner, Shelby Bidwell, Karen Clark, Emily W. Davis, Brian Smith-White, Wratko Hlavina, Kim D. Pruitt, Valérie Schneider, Terence D. Murphy

    Published 2023
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  9. 9
    Rapid and sensitive detection of genome contamination at scale with FCS-GX

    Rapid and sensitive detection of genome contamination at scale with FCS-GX by Alexander Astashyn, Eric S. Tvedte, Deacon Sweeney, Victor Sapojnikov, Nathan Bouk, Victor Joukov, Eyal Mozes, Pooja K Strope, Pape M. Sylla, Lukas Wagner, Shelby Bidwell, Larissa C. Brown, Karen Clark, Emily W. Davis, Brian Smith-White, Wratko Hlavina, Kim D. Pruitt, Valérie Schneider, Terence D. Murphy

    Published 2024
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  10. 10
    The status of the human gene catalogue

    The status of the human gene catalogue by Paulo Amaral, Sílvia Carbonell Sala, Francisco M. De La Vega, Tiago Faial, Adam Frankish, T Gingeras, Roderic Guigó, Jennifer Harrow, Artemis G. Hatzigeorgiou, Rory Johnson, Terence D. Murphy, Mihaela Pertea, Kim D. Pruitt, Shashikant Pujar, Hazuki Takahashi, Igor Ulitsky, Ales Varabyou, Christine A. Wells, Mark Yandell, Piero Carninci, Steven L. Salzberg

    Published 2023
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  11. 11
    Database resources of the National Center for Biotechnology Information

    Database resources of the National Center for Biotechnology Information by Eric W Sayers, Jeffrey Beck, J. Rodney Brister, Evan Bolton, Kathi Canese, Donald C. Comeau, Kathryn Funk, Anne Ketter, Sunghwan Kim, Avi Kimchi, Paul Kitts, Anatoliy Kuznetsov, Stacy Lathrop, Zhiyong Lu, Kelly M. McGarvey, Thomas Madden, Terence D. Murphy, Nuala A. O’Leary, Lon Phan, Valérie Schneider, Françoise Thibaud‐Nissen, Barton W Trawick, Kim D. Pruitt, James Ostell

    Published 2019
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  12. 12
    Database resources of the national center for biotechnology information

    Database resources of the national center for biotechnology information by Eric W Sayers, Evan Bolton, J. Rodney Brister, Kathi Canese, Jessica Chan, Donald C. Comeau, Ryan Connor, Kathryn Funk, Chris Kelly, Sunghwan Kim, Tom Madej, Aron Marchler‐Bauer, Christopher J. Lanczycki, Stacy Lathrop, Zhiyong Lu, Françoise Thibaud‐Nissen, Terence D. Murphy, Lon Phan, Yuri Skripchenko, Tony Tse, Jiyao Wang, Rebecca Williams, Barton W Trawick, Kim D. Pruitt, Stephen T. Sherry

    Published 2021
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  13. 13
    Database resources of the National Center for Biotechnology Information in 2025

    Database resources of the National Center for Biotechnology Information in 2025 by Eric W Sayers, Jeffrey Beck, Evan Bolton, J. Rodney Brister, Jessica Chan, Ryan Connor, Michael Feldgarden, Anna M Fine, Kathryn Funk, Jinna Hoffman, Sivakumar Kannan, Christopher E. Kelly, William Klimke, Sunghwan Kim, Stacy Lathrop, Aron Marchler‐Bauer, Terence D. Murphy, Chris O’Sullivan, Erin Schmieder, Yuriy Skripchenko, Adam Stine, Francoise Thibaud-Nissen, Jiyao Wang, Jian Ye, Edward T. Zellers, Valérie Schneider, Kim D. Pruitt

    Published 2024
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  14. 14
    Genome of the house fly, Musca domestica L., a global vector of diseases with adaptations to a septic environment

    Genome of the house fly, Musca domestica L., a global vector of diseases with adaptations to a septic environment by Jeffrey G. Scott, Wesley C. Warren, Leo W. Beukeboom, Daniel Bopp, Andrew G. Clark, Sarah D. Giers, Monika Hediger, Andrew K. Jones, Shinji Kasai, Cheryl A. Leichter, Ming Li, Richard P. Meisel, Patrick Minx, Terence D. Murphy, David R. Nelson, William Reid, Frank D. L. Rinkevich, Hugh M. Robertson, Timothy B. Sackton, David B. Sattelle, Françoise Thibaud‐Nissen, Chad Tomlinson, Louis van de Zande, Kimberly K. O. Walden, Richard K. Wilson, Nannan Liu

    Published 2014
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  15. 15
    RefSeq: an update on mammalian reference sequences

    RefSeq: an update on mammalian reference sequences by Kim D. Pruitt, Garth Brown, Susan M. Hiatt, Françoise Thibaud‐Nissen, Alexander Astashyn, Olga Ermolaeva, Catherine M. Farrell, Jennifer Hart, Melissa Landrum, Kelly M. McGarvey, Michael R. Murphy, Nuala A. O’Leary, Shashikant Pujar, Bhanu Rajput, Sanjida H Rangwala, Lillian D. Riddick, Andrei Shkeda, Hanzhen Sun, Pamela Tamez, Raymond E. Tully, Craig Wallin, David Webb, Janet A. Weber, Wendy Wu, Michael DiCuccio, Paul Kitts, Donna Maglott, Terence D. Murphy, James M. Ostell

    Published 2013
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  16. 16
    Database resources of the National Center for Biotechnology Information in 2023

    Database resources of the National Center for Biotechnology Information in 2023 by Eric W Sayers, Evan Bolton, J. Rodney Brister, Kathi Canese, Jessica Chan, Donald C. Comeau, Catherine M. Farrell, Michael Feldgarden, Anna M Fine, Kathryn Funk, Eneida Hatcher, Sivakumar Kannan, Christopher E. Kelly, Sunghwan Kim, William Klimke, Melissa Landrum, Stacy Lathrop, Zhiyong Lu, Thomas Madden, Adriana Malheiro, Aron Marchler‐Bauer, Terence D. Murphy, Lon Phan, Shashikant Pujar, Sanjida H Rangwala, Valérie Schneider, Tony Tse, Jiyao Wang, Jian Ye, Barton W Trawick, Kim D. Pruitt, Stephen T. Sherry

    Published 2022
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  17. 17
    Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

    Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly by Valérie Schneider, Tina Graves-Lindsay, Kerstin Howe, Nathan Bouk, Hsiu-Chuan Chen, Paul Kitts, Terence D. Murphy, Kim D. Pruitt, Françoise Thibaud‐Nissen, Derek Albracht, Robert S. Fulton, Milinn Kremitzki, Vincent Magrini, Chris Markovic, Sean McGrath, Karyn Meltz Steinberg, Kate Auger, William Chow, Joanna Collins, Glenn Harden, Tim Hubbard, Sarah Pelan, Jared T. Simpson, Glen Threadgold, James Torrance, Jonathan Wood, Laura Clarke, Sergey Koren, Matthew Boitano, Heng Li, Chen-Shan Chin, Adam M. Phillippy, Richard Durbin, Richard K. Wilson, Paul Flicek, Deanna M. Church

    Published 2016
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  18. 18
    Consensus coding sequence (CCDS) database: a standardized set of human and mouse protein-coding regions supported by expert curation

    Consensus coding sequence (CCDS) database: a standardized set of human and mouse protein-coding regions supported by expert curation by Shashikant Pujar, Nuala A. O’Leary, Catherine M. Farrell, Jane Loveland, Jonathan M. Mudge, Craig Wallin, Carlos García Girón, Mark Diekhans, If Barnes, Ruth Bennett, Andrew Berry, Eric Cox, Claire Davidson, Tamara Goldfarb, José M. González, Toby Hunt, John K. Jackson, Vinita Joardar, Mike Kay, Vamsi K. Kodali, Fergal J. Martin, Monica McAndrews, Kelly M. McGarvey, Michael R. Murphy, Bhanu Rajput, Sanjida H Rangwala, Lillian D. Riddick, Ruth L. Seal, Marie‐Marthe Suner, David Webb, Sophia Zhu, Bronwen Aken, Elspeth A. Bruford, Carol J. Bult, Adam Frankish, Terence D. Murphy, Kim D. Pruitt

    Published 2017
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  19. 19
    Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

    Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly by Valérie Schneider, Tina A. Graves-Lindsay, Kerstin Howe, Nathan Bouk, Hsiu-Chuan Chen, Paul Kitts, Terence D. Murphy, Kim D. Pruitt, Françoise Thibaud‐Nissen, Derek Albracht, Robert S. Fulton, Milinn Kremitzki, Vincent Magrini, Chris Markovic, Sean McGrath, Karyn Meltz Steinberg, Kate Auger, William Chow, Joanna Collins, Glenn Harden, Tim Hubbard, Sarah Pelan, Jared T. Simpson, Glen Threadgold, James Torrance, Jonathan Wood, Laura Clarke, Sergey Koren, Matthew Boitano, Paul Peluso, Heng Li, Chen-Shan Chin, Adam M. Phillippy, Richard Durbin, Richard K. Wilson, Paul Flicek, Evan E. Eichler, Deanna M. Church

    Published 2017
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  20. 20
    Database resources of the National Center for Biotechnology Information

    Database resources of the National Center for Biotechnology Information by Eric W Sayers, Jeffrey Beck, Evan Bolton, J. Rodney Brister, Jessica Chan, Donald C. Comeau, Ryan Connor, Michael DiCuccio, Catherine M. Farrell, Michael Feldgarden, Anna M Fine, Kathryn Funk, Eneida Hatcher, Marilu Hoeppner, Megan Kane, Sivakumar Kannan, Kenneth Katz, Christopher E. Kelly, William Klimke, Sunghwan Kim, Avi Kimchi, Melissa Landrum, Stacy Lathrop, Zhiyong Lu, Adriana Malheiro, Aron Marchler‐Bauer, Terence D. Murphy, Lon Phan, Arjun Prasad, Shashikant Pujar, Amanda Sawyer, Erin Schmieder, Valérie Schneider, Conrad L. Schoch, Shobha Sharma, Françoise Thibaud‐Nissen, Barton W Trawick, Thilakam Venkatapathi, Jiyao Wang, Kim D. Pruitt, Stephen T. Sherry

    Published 2023
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