Hakutulokset - Surendra S. Negi

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  1. 1
    Automated Detection of Conformational Epitopes Using Phage Display Peptide Sequences

    Automated Detection of Conformational Epitopes Using Phage Display Peptide Sequences Tekijä Surendra S. Negi, Werner Braun

    Julkaistu 2009
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  2. 2
    Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity

    Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity Tekijä Surendra S. Negi, Werner Braun

    Julkaistu 2016
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  3. 3
    Regional and temporal coordinated mutation patterns in SARS-CoV-2 spike protein revealed by a clustering and network analysis

    Regional and temporal coordinated mutation patterns in SARS-CoV-2 spike protein revealed by a clustering and network analysis Tekijä Surendra S. Negi, Catherine H. Schein, Werner Braun

    Julkaistu 2022
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  4. 4
    The updated Structural Database of Allergenic Proteins (SDAP 2.0) provides 3D models for allergens and incorporated bioinformatics tools

    The updated Structural Database of Allergenic Proteins (SDAP 2.0) provides 3D models for allergens and incorporated bioinformatics tools Tekijä Surendra S. Negi, Catherine H. Schein, Werner Braun

    Julkaistu 2023
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  5. 5
    Membrane Fusion Triggering

    Membrane Fusion Triggering Tekijä Chanakha K. Navaratnarajah, Surendra S. Negi, Werner Braun, Roberto Cattaneo

    Julkaistu 2012
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  6. 6
    InterProSurf: a web server for predicting interacting sites on protein surfaces

    InterProSurf: a web server for predicting interacting sites on protein surfaces Tekijä Surendra S. Negi, Catherine H. Schein, Numan Oezguen, Trevor D. Power, Werner Braun

    Julkaistu 2007
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  7. 7
    Comprehensive 3D-modeling of allergenic proteins and amino acid composition of potential conformational IgE epitopes

    Comprehensive 3D-modeling of allergenic proteins and amino acid composition of potential conformational IgE epitopes Tekijä Numan Oezguen, Bin Zhou, Surendra S. Negi, Ovidiu Ivanciuc, Catherine H. Schein, Gilles Labesse, Werner Braun

    Julkaistu 2008
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  8. 8
    Western Equine Encephalitis Virus: Evolutionary Analysis of a Declining Alphavirus Based on Complete Genome Sequences

    Western Equine Encephalitis Virus: Evolutionary Analysis of a Declining Alphavirus Based on Complete Genome Sequences Tekijä Nicholas A. Bergren, Albert J. Auguste, Naomi L. Forrester, Surendra S. Negi, Werner Braun, Scott C. Weaver

    Julkaistu 2014
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  9. 9
    The importance of the 2S albumins for allergenicity and cross-reactivity of peanuts, tree nuts, and sesame seeds

    The importance of the 2S albumins for allergenicity and cross-reactivity of peanuts, tree nuts, and sesame seeds Tekijä Stephen C. Dreskin, Stef J. Koppelman, Sandra Andorf, Kari C. Nadeau, Anjeli Kalra, Werner Braun, Surendra S. Negi, Xueni Chen, Catherine H. Schein

    Julkaistu 2020
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  10. 10
    Impact of <scp>AlphaFold</scp> on structure prediction of protein complexes: The <scp>CASP15‐CAPRI</scp> experiment

    Impact of <scp>AlphaFold</scp> on structure prediction of protein complexes: The <scp>CASP15‐CAPRI</scp> experiment Tekijä Marc F. Lensink, Guillaume Brysbaert, Nessim Raouraoua, Paul A. Bates, Marco Giulini, Rodrigo V. Honorato, Charlotte van Noort, João M. C. Teixeira, Alexandre M. J. J. Bonvin, Ren Kong, Hang Shi, Xufeng Lu, Shan Chang, Jian Liu, Zhiye Guo, Xiao Chen, Alex Morehead, Raj S. Roy, Tianqi Wu, Nabin Giri, Farhan Quadir, Chen Chen, Jianlin Cheng, Carlos A. Del Carpio, Eichiro Ichiishi, Luis Ángel Rodríguez-Lumbreras, Juan Fernández‐Recio, Ameya Harmalkar, Lee‐Shin Chu, Samuel W. Canner, Rituparna Smanta, Jeffrey J. Gray, Hao Li, Peicong Lin, Jiahua He, Huanyu Tao, Sheng‐You Huang, Jorge Roel‐Touris, Brian Jiménez‐García, Charles Christoffer, Anika Jain, Yuki Kagaya, Harini Kannan, Tsukasa Nakamura, Genki Terashi, Jacob Verburgt, Yuanyuan Zhang, Zicong Zhang, Hayato Fujuta, Masakazu Sekijima, Daisuke Kihara, Omeir Khan, Sergei Kotelnikov, Usman Ghani, Dzmitry Padhorny, Dmitri Beglov, Sándor Vajda, Dima Kozakov, Surendra S. Negi, Tiziana Ricciardelli, Didier Barradas‐Bautista, Zhen Cao, Mohit Chawla, Luigi Cavallo, Romina Oliva, Rui Yin, Melyssa Cheung, Johnathan D. Guest, Jessica Lee, Brian G. Pierce, Ben Shor, Tomer Cohen, Matan Halfon, Dina Schneidman‐Duhovny, Shaowen Zhu, Rujie Yin, Yuanfei Sun, Yang Shen, Martyna Maszota‐Zieleniak, Krzysztof K. Bojarski, Emilia A. Lubecka, Mateusz Marcisz, Annemarie Danielsson, Łukasz Dziadek, Margrethe Gaardløs, Artur Giełdoń, Adam Liwo, Sergey A. Samsonov, Rafał Ślusarz, Karolina Zięba, Adam K. Sieradzan, Cezary Czaplewski, Shinpei Kobayashi, Yuta Miyakawa, Yasuomi Kiyota, Mayuko Takeda‐Shitaka, Kliment Olechnovič, Lukas Valančauskas, Justas Dapkūnas, Česlovas Venclovas

    Julkaistu 2023
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  11. 11
    Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment

    Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment Tekijä Marc F. Lensink, Sameer Velankar, Andriy Kryshtafovych, Shen‐You Huang, Dina Schneidman‐Duhovny, Andrej Šali, Joan Segura, Narcís Fernández‐Fuentes, Shruthi Viswanath, Ron Elber, Sergei Grudinin, Petr Popov, Émilie Neveu, Hasup Lee, Minkyung Baek, Sangwoo Park, Lim Heo, Gyu Rie Lee, Chaok Seok, Sanbo Qin, Huan‐Xiang Zhou, David W. Ritchie, Bernard Maigret, Marie‐Dominique Devignes, Anisah W. Ghoorah, Mieczyslaw Torchala, Raphaël A. G. Chaleil, Paul A. Bates, Efrat Ben‐Zeev, Miriam Eisenstein, Surendra S. Negi, Zhiping Weng, Thom Vreven, Brian G. Pierce, Tyler Borrman, Jinchao Yu, Françoise Ochsenbein, Raphaël Guérois, Anna Vangone, João Rodrigues, Gydo van Zundert, Mehdi Nellen, Li C. Xue, Ezgi Karaca, Adrien S. J. Melquiond, Koen M. Visscher, Panagiotis L. Kastritis, Alexandre M. J. J. Bonvin, Xianjin Xu, Liming Qiu, Chengfei Yan, Jilong Li, Zhiwei Ma, Jianlin Cheng, Xiaoqin Zou, Yang Shen, Lenna X. Peterson, Hyungrae Kim, Amit Roy, Xusi Han, Juan Esquivel‐Rodríguez, Daisuke Kihara, Xiaofeng Yu, Neil J. Bruce, Jonathan C. Fuller, Rebecca C. Wade, Ivan Anishchenko, Petras J. Kundrotas, Ilya A. Vakser, Kenichiro Imai, Kazunori Yamada, Toshiyuki Oda, Tsukasa Nakamura, Kentaro Tomii, Chiara Pallara, Miguel Romero‐Durana, Brian Jiménez‐García, Iain H. Moal, Juan Fernández‐Recio, Jong Young Joung, Jong Yun Kim, Keehyoung Joo, Jooyoung Lee, Dima Kozakov, Sándor Vajda, Scott E. Mottarella, David R. Hall, Dmitri Beglov, Artem B. Mamonov, Bing Xia, Tanggis Bohnuud, Carlos A. Del Carpio, Eichiro Ichiishi, Nicholas Marze, Daisuke Kuroda, Shourya S. Roy Burman, Jeffrey J. Gray, Edrisse Chermak, Luigi Cavallo, Romina Oliva

    Julkaistu 2016
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