Výsledky vyhledávání - Sudhakar, Padhmanand

MicrobioLink: An Integrated Computational Pipeline to Infer Functional Effects of Microbiome–Host Interactions Autor Andrighetti, Tahila, Bohar, Balazs, Lemke, Ney, Sudhakar, Padhmanand, Korcsmaros, Tamas

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Computational Biology and Machine Learning Approaches to Understand Mechanistic Microbiome-Host Interactions Autor Sudhakar, Padhmanand, Machiels, Kathleen, Verstockt, Bram, Korcsmaros, Tamas, Vermeire, Séverine

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What We Learned From Big Data for Autophagy Research Autor Jacomin, Anne-Claire, Gul, Lejla, Sudhakar, Padhmanand, Korcsmaros, Tamas, Nezis, Ioannis P.

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Construction and verification of the transcriptional regulatory response network of Streptococcus mutans upon treatment with the biofilm inhibitor carolacton Autor Sudhakar, Padhmanand, Reck, Michael, Wang, Wei, He, Feng Q, Dobler, Irene W, Zeng, An-Ping

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Erratum to: Construction and verification of the transcriptional regulatory response network of Streptococcus mutans upon treatment with the biofilm inhibitor carolacton Autor Sudhakar, Padhmanand, Reck, Michael, Wang, Wei, He, Feng Q, Wagner-Döbler, Irene, Zeng, An-Ping

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Big data in IBD: big progress for clinical practice Autor Seyed Tabib, Nasim Sadat, Madgwick, Matthew, Sudhakar, Padhmanand, Verstockt, Bram, Korcsmaros, Tamas, Vermeire, Séverine

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Understanding the Molecular Drivers of Disease Heterogeneity in Crohn’s Disease Using Multi-omic Data Integration and Network Analysis Autor Sudhakar, Padhmanand, Verstockt, Bram, Cremer, Jonathan, Verstockt, Sare, Sabino, João, Ferrante, Marc, Vermeire, Séverine

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ULK1 and ULK2 are less redundant than previously thought: computational analysis uncovers distinct regulation and functions of these autophagy induction proteins Autor Demeter, Amanda, Romero-Mulero, Mari Carmen, Csabai, Luca, Ölbei, Márton, Sudhakar, Padhmanand, Haerty, Wilfried, Korcsmáros, Tamás

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Integrated analysis of microbe-host interactions in Crohn’s disease reveals potential mechanisms of microbial proteins on host gene expression Autor Sudhakar, Padhmanand, Andrighetti, Tahila, Verstockt, Sare, Caenepeel, Clara, Ferrante, Marc, Sabino, João, Verstockt, Bram, Vermeire, Severine

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A genome-wide study of two-component signal transduction systems in eight newly sequenced mutans streptococci strains Autor Song, Lifu, Sudhakar, Padhmanand, Wang, Wei, Conrads, Georg, Brock, Anke, Sun, Jibin, Wagner-Döbler, Irene, Zeng, An-Ping

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SalmoNet, an integrated network of ten Salmonella enterica strains reveals common and distinct pathways to host adaptation Autor Métris, Aline, Sudhakar, Padhmanand, Fazekas, David, Demeter, Amanda, Ari, Eszter, Olbei, Marton, Branchu, Priscilla, Kingsley, Rob A., Baranyi, Jozsef, Korcsmáros, Tamas

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Extracellular vesicles produced by the human commensal gut bacterium Bacteroides thetaiotaomicron affect host immune pathways in a cell‐type specific manner that are altered in inf... Autor Gul, Lejla, Modos, Dezso, Fonseca, Sonia, Madgwick, Matthew, Thomas, John P., Sudhakar, Padhmanand, Booth, Catherine, Stentz, Régis, Carding, Simon R., Korcsmaros, Tamas

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Targeted interplay between bacterial pathogens and host autophagy Autor Sudhakar, Padhmanand, Jacomin, Anne-Claire, Hautefort, Isabelle, Samavedam, Siva, Fatemian, Koorosh, Ari, Eszter, Gul, Leila, Demeter, Amanda, Jones, Emily, Korcsmaros, Tamas, Nezis, Ioannis P.

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ViralLink: An integrated workflow to investigate the effect of SARS-CoV-2 on intracellular signalling and regulatory pathways Autor Treveil, Agatha, Bohar, Balazs, Sudhakar, Padhmanand, Gul, Lejla, Csabai, Luca, Olbei, Marton, Poletti, Martina, Madgwick, Matthew, Andrighetti, Tahila, Hautefort, Isabelle, Modos, Dezso, Korcsmaros, Tamas

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Microbiota, not host origin drives ex vivo intestinal epithelial responses Autor Arnauts, Kaline, Sudhakar, Padhmanand, Verstockt, Sare, Lapierre, Cynthia, Potche, Selina, Caenepeel, Clara, Verstockt, Bram, Raes, Jeroen, Vermeire, Séverine, Sabino, João, Verfaillie, Catherine, Ferrante, Marc

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Evolution of regulatory networks associated with traits under selection in cichlids Autor Mehta, Tarang K., Koch, Christopher, Nash, Will, Knaack, Sara A., Sudhakar, Padhmanand, Olbei, Marton, Bastkowski, Sarah, Penso-Dolfin, Luca, Korcsmaros, Tamas, Haerty, Wilfried, Roy, Sushmita, Di-Palma, Federica

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MDH1 and MPP7 regulate autophagy in pancreatic ductal adenocarcinoma Autor New, Maria, Van Acker, Tim, Sakamaki, Jun-ichi, Jiang, Ming, Saunders, Rebecca E., Long, Jaclyn, Wang, Victoria M.-Y., Behrens, Axel, Cerveira, Joana, Sudhakar, Padhmanand, Korcsmaros, Tamas, Jefferies, Harold B. J., Ryan, Kevin M., Howell, Michael, Tooze, Sharon A.

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A systems genomics approach to uncover patient-specific pathogenic pathways and proteins in ulcerative colitis Autor Brooks-Warburton, Johanne, Modos, Dezso, Sudhakar, Padhmanand, Madgwick, Matthew, Thomas, John P., Bohar, Balazs, Fazekas, David, Zoufir, Azedine, Kapuy, Orsolya, Szalay-Beko, Mate, Verstockt, Bram, Hall, Lindsay J., Watson, Alastair, Tremelling, Mark, Parkes, Miles, Vermeire, Severine, Bender, Andreas, Carding, Simon R., Korcsmaros, Tamas

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Integrative analysis of Paneth cell proteomic and transcriptomic data from intestinal organoids reveals functional processes dependent on autophagy Autor Jones, Emily J., Matthews, Zoe J., Gul, Lejla, Sudhakar, Padhmanand, Treveil, Agatha, Divekar, Devina, Buck, Jasmine, Wrzesinski, Tomasz, Jefferson, Matthew, Armstrong, Stuart D., Hall, Lindsay J., Watson, Alastair J. M., Carding, Simon R., Haerty, Wilfried, Di Palma, Federica, Mayer, Ulrike, Powell, Penny P., Hautefort, Isabelle, Wileman, Tom, Korcsmaros, Tamas

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SignaLink3: a multi-layered resource to uncover tissue-specific signaling networks Autor Csabai, Luca, Fazekas, Dávid, Kadlecsik, Tamás, Szalay-Bekő, Máté, Bohár, Balázs, Madgwick, Matthew, Módos, Dezső, Ölbei, Márton, Gul, Lejla, Sudhakar, Padhmanand, Kubisch, János, Oyeyemi, Oyebode James, Liska, Orsolya, Ari, Eszter, Hotzi, Bernadette, Billes, Viktor A, Molnár, Eszter, Földvári-Nagy, László, Csályi, Kitti, Demeter, Amanda, Pápai, Nóra, Koltai, Mihály, Varga, Máté, Lenti, Katalin, Farkas, Illés J, Türei, Dénes, Csermely, Péter, Vellai, Tibor, Korcsmáros, Tamás

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