Resultados de procura - Stuart, Joshua

Pathway-based analysis of mutation impact por Stuart, Joshua

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TRACING CO-REGULATORY NETWORK DYNAMICS IN NOISY, SINGLE-CELL TRANSCRIPTOME TRAJECTORIES por Cordero, Pablo, Stuart, Joshua M.

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PRINCIPAL COMPONENTS ANALYSIS TO SUMMARIZE MICROARRAY EXPERIMENTS: APPLICATION TO SPORULATION TIME SERIES por Raychaudhuri, Soumya, Stuart, Joshua M., Altman, Russ B.

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Computational Integration of Homolog and Pathway Gene Module Expression Reveals General Stemness Signatures por Koeva, Martina, Forsberg, E. Camilla, Stuart, Joshua M.

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ONE-CLASS DETECTION OF CELL STATES IN TUMOR SUBTYPES por SOKOLOV, ARTEM, PAULL, EVAN O., STUART, JOSHUA M.

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Accurate cancer phenotype prediction with AKLIMATE, a stacked kernel learner integrating multimodal genomic data and pathway knowledge por Uzunangelov, Vladislav, Wong, Christopher K., Stuart, Joshua M.

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VEGA is an interpretable generative model for inferring biological network activity in single-cell transcriptomics por Seninge, Lucas, Anastopoulos, Ioannis, Ding, Hongxu, Stuart, Joshua

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Biological process activity transformation of single cell gene expression for cross-species alignment por Ding, Hongxu, Blair, Andrew, Yang, Ying, Stuart, Joshua M.

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PLATYPUS: A Multiple–View Learning Predictive Framework for Cancer Drug Sensitivity Prediction por Graim, Kiley, Friedl, Verena, Houlahan, Kathleen E., Stuart, Joshua M.

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Information-based methods for predicting gene function from systematic gene knock-downs por Weirauch, Matthew T, Wong, Christopher K, Byrne, Alexandra B, Stuart, Joshua M

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Molecular Pathways: Extracting Medical Knowledge from High Throughput Genomic Data por Goldstein, Theodore, Paull, Evan O., Ellis, Matthew J., Stuart, Joshua M.

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Towards inferring nanopore sequencing ionic currents from nucleotide chemical structures por Ding, Hongxu, Anastopoulos, Ioannis, Bailey, Andrew D., Stuart, Joshua, Paten, Benedict

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Dual RNA-Seq analysis of SARS-CoV-2 correlates specific human transcriptional response pathways directly to viral expression por Maulding, Nathan D., Seiler, Spencer, Pearson, Alexander, Kreusser, Nicholas, Stuart, Joshua M.

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A search engine to identify pathway genes from expression data on multiple organisms por Chen, Chunnuan, Weirauch, Matthew T, Powell, Corey C, Zambon, Alexander C, Stuart, Joshua M

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Pattern recognition of genomic features with microarrays: site typing of Mycobacterium tuberculosis strains por Raychaudhuri, Soumya, Stuart, Joshua M., Liu, Xuemin, Small, Peter M., Altman, Russ B.

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Misannotations of rRNA can now generate 90% false positive protein matches in metatranscriptomic studies por Tripp, H. James, Hewson, Ian, Boyarsky, Sam, Stuart, Joshua M., Zehr, Jonathan P.

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Toward better benchmarking: challenge-based methods assessment in cancer genomics por Boutros, Paul C, Margolin, Adam A, Stuart, Joshua M, Califano, Andrea, Stolovitzky, Gustavo

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Pathway-Based Genomics Prediction using Generalized Elastic Net por Sokolov, Artem, Carlin, Daniel E., Paull, Evan O., Baertsch, Robert, Stuart, Joshua M.

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Transcriptional Map of Respiratory Versatility in the Hyperthermophilic Crenarchaeon Pyrobaculum aerophilum por Cozen, Aaron E., Weirauch, Matthew T., Pollard, Katherine S., Bernick, David L., Stuart, Joshua M., Lowe, Todd M.

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Discovering causal pathways linking genomic events to transcriptional states using Tied Diffusion Through Interacting Events (TieDIE) por Paull, Evan O., Carlin, Daniel E., Niepel, Mario, Sorger, Peter K., Haussler, David, Stuart, Joshua M.

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