Resultados da busca - Stewart, Chip

Comment on “DNA damage is a pervasive cause of sequencing errors, directly confounding variant identification” por Stewart, Chip, Leshchiner, Ignaty, Hess, Julian, Getz, Gad

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Somatic retrotransposition in human cancer revealed by whole-genome and exome sequencing por Helman, Elena, Lawrence, Michael S., Stewart, Chip, Sougnez, Carrie, Getz, Gad, Meyerson, Matthew

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Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression por Busby, Michele A., Stewart, Chip, Miller, Chase A., Grzeda, Krzysztof R., Marth, Gabor T.

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MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping por Lee, Wan-Ping, Stromberg, Michael P., Ward, Alistair, Stewart, Chip, Garrison, Erik P., Marth, Gabor T.

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A (fire)cloud-based DNA methylation data preprocessing and quality control platform por Kangeyan, Divy, Dunford, Andrew, Iyer, Sowmya, Stewart, Chip, Hanna, Megan, Getz, Gad, Aryee, Martin J.

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Copy Number Variation detection from 1000 Genomes project exon capture sequencing data por Wu, Jiantao, Grzeda, Krzysztof R, Stewart, Chip, Grubert, Fabian, Urban, Alexander E, Snyder, Michael P, Marth, Gabor T

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Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability por Drier, Yotam, Lawrence, Michael S., Carter, Scott L., Stewart, Chip, Gabriel, Stacey B., Lander, Eric S., Meyerson, Matthew, Beroukhim, Rameen, Getz, Gad

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Expression divergence measured by transcriptome sequencing of four yeast species por Busby, Michele A, Gray, Jesse M, Costa, Allen M, Stewart, Chip, Stromberg, Michael P, Barnett, Derek, Chuang, Jeffrey H, Springer, Michael, Marth, Gabor T

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DeTiN : Overcoming Tumor in Normal Contamination por Taylor-Weiner, Amaro, Stewart, Chip, Giordano, Thomas, Miller, Mendy, Rosenberg, Mara, Macbeth, Alyssa, Lennon, Niall, Rheinbay, Esther, Landau, Dan-Avi, Wu, Catherine J., Getz, Gad

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GE-05 EXOME SEQUENCING REVEALS BRAF MUTATIONS IN PAPILLARY CRANIOPHARYNGIOMAS por Brastianos, Priscilla, Taylor-Weiner, Amaro, Manley, Peter, Jones, Robert, Dias-Santagata, Dora, Thorner, Aaron, Rodriguez, Fausto, Bernardo, Lindsay, Schubert, Laura, Stewart, Chip, Kieran, Mark, Louis, David, Getz, Gad, Santagata, Sandro

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A remarkably simple genome underlies highly malignant pediatric rhabdoid cancers por Lee, Ryan S., Stewart, Chip, Carter, Scott L., Ambrogio, Lauren, Cibulskis, Kristian, Sougnez, Carrie, Lawrence, Michael S., Auclair, Daniel, Mora, Jaume, Golub, Todd R., Biegel, Jaclyn A., Getz, Gad, Roberts, Charles W.M.

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Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines por Ellrott, Kyle, Bailey, Matthew H., Saksena, Gordon, Covington, Kyle R., Kandoth, Cyriac, Stewart, Chip, Hess, Julian, Ma, Singer, McLellan, Michael, Sofia, Heidi J., Hutter, Carolyn, Getz, Gad, Wheeler, David, Ding, Li

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Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation por Costello, Maura, Pugh, Trevor J., Fennell, Timothy J., Stewart, Chip, Lichtenstein, Lee, Meldrim, James C., Fostel, Jennifer L., Friedrich, Dennis C., Perrin, Danielle, Dionne, Danielle, Kim, Sharon, Gabriel, Stacey B., Lander, Eric S., Fisher, Sheila, Getz, Gad

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SvABA: genome-wide detection of structural variants and indels by local assembly por Wala, Jeremiah A., Bandopadhayay, Pratiti, Greenwald, Noah F., O'Rourke, Ryan, Sharpe, Ted, Stewart, Chip, Schumacher, Steve, Li, Yilong, Weischenfeldt, Joachim, Yao, Xiaotong, Nusbaum, Chad, Campbell, Peter, Getz, Gad, Meyerson, Matthew, Zhang, Cheng-Zhong, Imielinski, Marcin, Beroukhim, Rameen

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Genomic analyses of PMBL reveal new drivers and mechanisms of sensitivity to PD-1 blockade por Chapuy, Bjoern, Stewart, Chip, Dunford, Andrew J., Kim, Jaegil, Wienand, Kirsty, Kamburov, Atanas, Griffin, Gabriel K., Chen, Pei-Hsuan, Lako, Ana, Redd, Robert A., Cote, Claire M., Ducar, Matthew D., Thorner, Aaron R., Rodig, Scott J., Getz, Gad, Shipp, Margaret A.

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Integrated Molecular Characterization of Uterine Carcinosarcoma por Cherniack, Andrew, Shen, Hui, Walter, Vonn, Stewart, Chip, Murray, Bradley, Bowlby, Reanne, Hu, Xin, Ling, Shiyun, Soslow, Robert A., Broaddus, Russell R., Zuna, Rosemary E., Robertson, Gordon, Laird, Peter W., Kucherlapati, Raju, Mills, Gordon B, Weinstein, John N, Zhang, Jiashan, Akbani, Rehan, Levine, Douglas A

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RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues por Yizhak, Keren, Aguet, Francois, Kim, Jaegil, Hess, Julian, Kübler, Kirsten, Grimsby, Jonna, Frazer, Ruslana, Zhang, Hailei, Haradhvala, Nicholas J., Rosebrock, Daniel, Livitz, Dimitri, Li, Xiao, Arich- Landkof, Eila, Shoresh, Noam, Stewart, Chip, Segrè, Ayelet V., Branton, Philip A., Polak, Paz, Ardlie, Kristin, Getz, Gad

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Genetic and Clonal Dissection of Murine Small Cell Lung Carcinoma Progression by Genome Sequencing por McFadden, David G., Papagiannakopoulos, Thales, Taylor-Weiner, Amaro, Stewart, Chip, Carter, Scott L., Cibulskis, Kristian, Bhutkar, Arjun, McKenna, Aaron, Dooley, Alison, Vernon, Amanda, Sougnez, Carrie, Malstrom, Scott, Heimann, Megan, Park, Jennifer, Chen, Frances, Farago, Anna F., Dayton, Talya, Shefler, Erica, Gabriel, Stacey, Getz, Gad, Jacks, Tyler

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Genomic evolutionary patterns of leiomyosarcoma and liposarcoma por Amin-Mansour, Ali, George, Suzanne, Sioltec, Stefano, Carter, Scott L., Rosenberg, Mara, Taylor-Weiner, Amaro, Stewart, Chip, Chevalier, Aaron, Seepo, Sara, Tracy, Adam, Getz, Gad, Hornick, Jason L., Nucci, Marisa R., Quade, Bradley, Demetri, George D., Raut, Chandrajit P., Garraway, Levi, Van Allen, Eliezer M., Wagner, Andrew J.

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A Comprehensive Map of Mobile Element Insertion Polymorphisms in Humans por Stewart, Chip, Kural, Deniz, Strömberg, Michael P., Walker, Jerilyn A., Konkel, Miriam K., Stütz, Adrian M., Urban, Alexander E., Grubert, Fabian, Lam, Hugo Y. K., Lee, Wan-Ping, Busby, Michele, Indap, Amit R., Garrison, Erik, Huff, Chad, Xing, Jinchuan, Snyder, Michael P., Jorde, Lynn B., Batzer, Mark A., Korbel, Jan O., Marth, Gabor T.

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