Ohcanbohtosat - Spidlen, Josef

FCS 3.1 Implementation Guidance() Dahkki Bray, Chris, Spidlen, Josef, Brinkman, Ryan R.

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ISAC's Gating-ML 2.0 data exchange standard for gating description Dahkki Spidlen, Josef, Moore, Wayne, Brinkman, Ryan R.

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ISAC’s Classification Results File Format (CLR) Dahkki Spidlen, Josef, Bray, Chris, Brinkman, Ryan R.

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Flow Cytometry Bioinformatics Dahkki O'Neill, Kieran, Aghaeepour, Nima, Špidlen, Josef, Brinkman, Ryan

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Flow cytometry data standards Dahkki Spidlen, Josef, Shooshtari, Parisa, Kollmann, Tobias R, Brinkman, Ryan R

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XML-based Gating Descriptions in Flow Cytometry Dahkki Spidlen, Josef, Leif, Robert, Moore, Wayne, Roederer, Mario, Brinkman, Ryan R.

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flowClean: Automated Identification and Removal of Fluorescence Anomalies in Flow Cytometry Data Dahkki Fletez-Brant, Kipper, Špidlen, Josef, Brinkman, Ryan R., Roederer, Mario, Chattopadhyay, Pratip K.

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Data File Standard for Flow Cytometry, Version FCS 3.2 Dahkki Spidlen, Josef, Moore, Wayne, Parks, David, Goldberg, Michael, Blenman, Kim, Cavenaugh, James S., Brinkman, Ryan

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Automated optimized parameters for T-distributed stochastic neighbor embedding improve visualization and analysis of large datasets Dahkki Belkina, Anna C., Ciccolella, Christopher O., Anno, Rina, Halpert, Richard, Spidlen, Josef, Snyder-Cappione, Jennifer E.

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flowCore: a Bioconductor package for high throughput flow cytometry Dahkki Hahne, Florian, LeMeur, Nolwenn, Brinkman, Ryan R, Ellis, Byron, Haaland, Perry, Sarkar, Deepayan, Spidlen, Josef, Strain, Errol, Gentleman, Robert

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ISAC Probe Tag Dictionary: Standardized Nomenclature for Detection and Visualization Labels Used in Cytometry and Microscopy Imaging Dahkki Blenman, Kim R. M., Spidlen, Josef, Parks, David R., Moore, Wayne, Treister, Adam, Leif, Robert, Bray, Chris, Goldberg, Michael, Brinkman, Ryan

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FuGEFlow: data model and markup language for flow cytometry Dahkki Qian, Yu, Tchuvatkina, Olga, Spidlen, Josef, Wilkinson, Peter, Gasparetto, Maura, Jones, Andrew R, Manion, Frank J, Scheuermann, Richard H, Sekaly, Rafick-Pierre, Brinkman, Ryan R

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Evaluating flow cytometer performance with weighted quadratic least squares analysis of LED and multi-level bead data Dahkki Parks, David R., Khettabi, Faysal El, Chase, Eric, Hoffman, Robert A., Perfetto, Stephen P., Spidlen, Josef, Wood, James C.S., Moore, Wayne A., Brinkman, Ryan R.

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Data Standards for Flow Cytometry Dahkki SPIDLEN, JOSEF, GENTLEMAN, ROBERT C., HAALAND, PERRY D., LANGILLE, MORGAN, MEUR, NOLWENN LE, OCHS, MICHAEL F., SCHMITT, CHARLES, SMITH, CLAYTON A., TREISTER, ADAM S., BRINKMAN, RYAN R.

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AutoSpill is a principled framework that simplifies the analysis of multichromatic flow cytometry data Dahkki Roca, Carlos P., Burton, Oliver T., Gergelits, Václav, Prezzemolo, Teresa, Whyte, Carly E., Halpert, Richard, Kreft, Łukasz, Collier, James, Botzki, Alexander, Spidlen, Josef, Humblet-Baron, Stéphanie, Liston, Adrian

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GenePattern flow cytometry suite Dahkki Spidlen, Josef, Barsky, Aaron, Breuer, Karin, Carr, Peter, Nazaire, Marc-Danie, Hill, Barbara Allen, Qian, Yu, Liefeld, Ted, Reich, Michael, Mesirov, Jill P, Wilkinson, Peter, Scheuermann, Richard H, Sekaly, Rafick-Pierre, Brinkman, Ryan R

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Methodology for Evaluating and Comparing Flow Cytometers: A Multisite Study of 23 Instruments Dahkki Parks, David R., Moore, Wayne A., Brinkman, Ryan R., Chen, Yong, Condello, Danilo, El Khettabi, Faysal, Nolan, John P., Perfetto, Stephen P., Redelman, Doug, Spidlen, Josef, Van Dyke, Jonathan, Wang, Lili, Wood, James C. S.

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Data File Standard for Flow Cytometry, Version FCS 3.1 Dahkki Spidlen, Josef, Moore, Wayne, Parks, David, Goldberg, Michael, Bray, Chris, Bierre, Pierre, Gorombey, Peter, Hyun, Bill, Hubbard, Mark, Lange, Simon, Lefebvre, Ray, Leif, Robert, Novo, David, Ostruszka, Leo, Treister, Adam, Wood, James, Murphy, Robert F., Roederer, Mario, Sudar, Damir, Zigon, Robert, Brinkman, Ryan R.

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MIFlowCyt: The Minimum Information about a Flow Cytometry Experiment Dahkki Lee, Jamie A., Spidlen, Josef, Boyce, Keith, Cai, Jennifer, Crosbie, Nicholas, Dalphin, Mark, Furlong, Jeff, Gasparetto, Maura, Goldberg, Michael, Goralczyk, Elizabeth M., Hyun, Bill, Jansen, Kirstin, Kollmann, Tobias, Kong, Megan, Leif, Robert, McWeeney, Shannon, Moloshok, Thomas D., Moore, Wayne, Nolan, Garry, Nolan, John, Nikolich-Zugich, Janko, Parrish, David, Purcell, Barclay, Qian, Yu, Selvaraj, Biruntha, Smith, Clayton, Tchuvatkina, Olga, Wertheimer, Anne, Wilkinson, Peter, Wilson, Christopher, Wood, James, Zigon, Robert, Scheuermann, Richard H., Brinkman, Ryan R.

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Guidelines for the use of flow cytometry and cell sorting in immunological studies Dahkki Cossarizza, Andrea, Chang, Hyun-Dong, Radbruch, Andreas, Akdis, Mübeccel, Andrä, Immanuel, Annunziato, Francesco, Bacher, Petra, Barnaba, Vincenzo, Battistini, Luca, Bauer, Wolfgang M., Baumgart, Sabine, Becher, Burkhard, Beisker, Wolfgang, Berek, Claudia, Blanco, Alfonso, Borsellino, Giovanna, Boulais, Philip E., Brinkman, Ryan R., Büscher, Martin, Busch, Dirk H., Bushnell, Timothy P., Cao, Xuetao, Cavani, Andrea, Chattopadhyay, Pratip K., Cheng, Qingyu, Chow, Sue, Clerici, Mario, Cooke, Anne, Cosma, Antonio, Cosmi, Lorenzo, Cumano, Ana, Dang, Van Duc, Davies, Derek, De Biasi, Sara, Del Zotto, Genny, Bella, Silvia Della, Dellabona, Paolo, Deniz, Günnur, Dessing, Mark, Diefenbach, Andreas, Di Santo, James, Dieli, Francesco, Dolf, Andreas, Donnenberg, Vera S., Dörner, Thomas, Ehrhardt, Götz R.A., Endl, Elmar, Engel, Pablo, Engelhardt, Britta, Esser, Charlotte, Everts, Bart, Dreher, Anita, Falk, Christine S., Fehniger, Todd A., Filby, Andrew, Fillatreau, Simon, Follo, Marie, Förster, Irmgard, Foster, John, Foulds, Gemma A., Frenette, Paul S., Galbraith, David, Garbi, Natalio, García-Godoy, Maria Dolores, Geginat, Jens, Ghoreschi, Kamran, Gibellini, Lara, Goettlinger, Christoph, Goodyear, Carl S., Gori, Andrea, Grogan, Jane, Gross, Mor, Grützkau, Andreas, Grummitt, Daryl, Hahn, Jonas, Hammer, Quirin, Hauser, Anja E., Haviland, David L., Hedley, David, Herrera, Guadalupe, Herrmann, Martin, Hiepe, Falk, Holland, Tristan, Hombrink, Pleun, Houston, Jessica P., Hoyer, Bimba F., Huang, Bo, Hunter, Christopher A., Iannone, Anna, Jäck, Hans-Martin, Jávega, Beatriz, Jonjic, Stipan, Juelke, Kerstin, Jung, Steffen, Kaiser, Toralf, Kalina, Tomas, Keller, Baerbel, Khan, Srijit, Kienhöfer, Deborah, Kroneis, Thomas, Kunkel, Désirée, Kurts, Christian, Kvistborg, Pia, Lannigan, Joanne, Lantz, Olivier, Larbi, Anis, Gut-Landmann, Salome Leibund, Leipold, Michael D., Levings, Megan K., Litwin, Virginia, Liu, Yanling, Lohoff, Michael, Lombardi, Giovanna, Lopez, Lilly, Lovett-Racke, Amy, Lubberts, Erik, Ludewig, Burkhard, Lugli, Enrico, Maecker, Holden T., Martrus, Glòria, Matarese, Giuseppe, Maueröder, Christian, McGrath, Mairi, McInnes, Iain, Mei, Henrik E., Melchers, Fritz, Melzer, Susanne, Mielenz, Dirk, Mills, Kingston, Mirrer, David, Mjösberg, Jenny, Moore, Jonni, Moran, Barry, Moretta, Alessandro, Moretta, Lorenzo, Mosmann, Tim R., Müller, Susann, Müller, Werner, Münz, Christian, Multhoff, Gabriele, Munoz, Luis Enrique, Murphy, Kenneth M., Nakayama, Toshinori, Nasi, Milena, Neudörfl, Christine, Nolan, John, Nourshargh, Sussan, O’Connor, José-Enrique, Ouyang, Wenjun, Oxenius, Annette, Palankar, Raghav, Panse, Isabel, Peterson, Pärt, Peth, Christian, Petriz, Jordi, Philips, Daisy, Pickl, Winfried, Piconese, Silvia, Pinti, Marcello, Pockley, A. Graham, Podolska, Malgorzata Justyna, Pucillo, Carlo, Quataert, Sally A., Radstake, Timothy R. D. J., Rajwa, Bartek, Rebhahn, Jonathan A., Recktenwald, Diether, Remmerswaal, Ester B.M., Rezvani, Katy, Rico, Laura G., Robinson, J. Paul, Romagnani, Chiara, Rubartelli, Anna, Ruckert, Beate, Ruland, Jürgen, Sakaguchi, Shimon, Sala-de-Oyanguren, Francisco, Samstag, Yvonne, Sanderson, Sharon, Sawitzki, Birgit, Scheffold, Alexander, Schiemann, Matthias, Schildberg, Frank, Schimisky, Esther, Schmid, Stephan A, Schmitt, Steffen, Schober, Kilian, Schüler, Thomas, Schulz, Axel Ronald, Schumacher, Ton, Scotta, Cristiano, Shankey, T. Vincent, Shemer, Anat, Simon, Anna-Katharina, Spidlen, Josef, Stall, Alan M., Stark, Regina, Stehle, Christina, Stein, Merle, Steinmetz, Tobit, Stockinger, Hannes, Takahama, Yousuke, Tarnok, Attila, Tian, Zhi Gang, Toldi, Gergely, Tornack, Julia, Traggiai, Elisabetta, Trotter, Joe, Ulrich, Henning, van der Braber, Marlous, van Lier, René A.W., Veldhoen, Marc, Vento-Asturias, Salvador, Vieira, Paulo, Voehringer, David, Volk, Hans-Dieter, von Volkmann, Konrad, Waisman, Ari, Walker, Rachael, Ward, Michael D., Warnatz, Klaus, Warth, Sarah, Watson, James V., Watzl, Carsten, Wegener, Leonie, Wiedemann, Annika, Wienands, Jürgen, Willimsky, Gerald, Wing, James, Wurst, Peter, Yu, Liping, Yue, Alice, Zhang, Qianjun, Zhao, Yi, Ziegler, Susanne, Zimmermann, Jakob

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