Search Results - Simon Rasmussen

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  1. 1
    Innate recognition of intracellular pathogens: detection and activation of the first line of defense

    Innate recognition of intracellular pathogens: detection and activation of the first line of defense by Simon Rasmussen, Line S. Reinert, Søren R. Paludan

    Published 2009
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  2. 2
    Leveraging haplotype information in heritability estimation and polygenic prediction

    Leveraging haplotype information in heritability estimation and polygenic prediction by Jonas Meisner, Michael E. Benros, Simon Rasmussen

    Published 2025
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  3. 3
    Double-Stranded RNA Is Produced by Positive-Strand RNA Viruses and DNA Viruses but Not in Detectable Amounts by Negative-Strand RNA Viruses

    Double-Stranded RNA Is Produced by Positive-Strand RNA Viruses and DNA Viruses but Not in Detectable Amounts by Negative-Strand RNA Viruses by Friedemann Weber, Valentina Wagner, Simon Rasmussen, Rune Hartmann, Søren R. Paludan

    Published 2006
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  4. 4
    <i>Lactobacillus acidophilus</i> induces virus immune defence genes in murine dendritic cells by a Toll‐like receptor‐2‐dependent mechanism

    <i>Lactobacillus acidophilus</i> induces virus immune defence genes in murine dendritic cells by a Toll‐like receptor‐2‐dependent mechanism by Gudrun Weiss, Simon Rasmussen, Louise Zeuthen, Birgit Nøhr Nielsen, Hanne Jarmer, Lene Jespersen, Hanne Frøkiær

    Published 2010
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  5. 5
    Emergence and Spread of Basal Lineages of Yersinia pestis during the Neolithic Decline

    Emergence and Spread of Basal Lineages of Yersinia pestis during the Neolithic Decline by Nicolás Rascovan, Karl-Göran Sjögren, Kristian Kristiansen, Rasmus Nielsen, Eske Willerslev, Christelle Desnues, Simon Rasmussen

    Published 2018
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  6. 6
    Adversarial and variational autoencoders improve metagenomic binning

    Adversarial and variational autoencoders improve metagenomic binning by Pau Piera Líndez, Joachim Johansen, Svetlana Kutuzova, Arnór I. Sigurdsson, Jakob Nybo Nissen, Simon Rasmussen

    Published 2023
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  7. 7
    snpTree - a web-server to identify and construct SNP trees from whole genome sequence data

    snpTree - a web-server to identify and construct SNP trees from whole genome sequence data by Pimlapas Leekitcharoenphon, Rolf Sommer Kaas, Martin Christen Frølund Thomsen, Carsten Friis, Simon Rasmussen, Frank M. Aarestrup

    Published 2012
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  8. 8
    Activation of Innate Defense against a Paramyxovirus Is Mediated by RIG-I and TLR7 and TLR8 in a Cell-Type-Specific Manner

    Activation of Innate Defense against a Paramyxovirus Is Mediated by RIG-I and TLR7 and TLR8 in a Cell-Type-Specific Manner by Jesper Melchjorsen, Søren B. Jensen, Lene Malmgaard, Simon Rasmussen, Friedemann Weber, Andrew Bowie, Sampsa Matikainen, Søren R. Paludan

    Published 2005
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  9. 9
    Identification of acquired antimicrobial resistance genes

    Identification of acquired antimicrobial resistance genes by Ea Zankari, Henrik Hasman, Salvatore Cosentino, Martin Vestergaard, Simon Rasmussen, Ole Lund, Frank M. Aarestrup, Mikkel V. Larsen

    Published 2012
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  10. 10
    Type I Interferon Production during Herpes Simplex Virus Infection Is Controlled by Cell-Type-Specific Viral Recognition through Toll-Like Receptor 9, the Mitochondrial Antiviral Signaling Protein Pathway, and Novel Recognition Systems

    Type I Interferon Production during Herpes Simplex Virus Infection Is Controlled by Cell-Type-Specific Viral Recognition through Toll-Like Receptor 9, the Mitochondrial Antiviral S... by Simon Rasmussen, Louise N. Sørensen, Lene Malmgaard, Nina Ank, Joel D. Baines, Zhijian J. Chen, Søren R. Paludan

    Published 2007
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  11. 11
    Machine learning and deep learning applications in microbiome research

    Machine learning and deep learning applications in microbiome research by Ricardo Hernández Medina, Svetlana Kutuzova, Knud Nor Nielsen, Joachim Johansen, Lars Hestbjerg Hansen, Mads Eggert Nielsen, Simon Rasmussen

    Published 2022
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  12. 12
    The evolutionary impact of childhood cancer on the human gene pool

    The evolutionary impact of childhood cancer on the human gene pool by Ulrik Kristoffer Stoltze, Jon Foss-Skiftesvik, Thomas van Overeem Hansen, Simon Rasmussen, Konrad J. Karczewski, Karin Wadt, Kjeld Schmiegelow

    Published 2024
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  13. 13
    Transcriptome Responses to Combinations of Stresses in Arabidopsis

    Transcriptome Responses to Combinations of Stresses in Arabidopsis by Simon Rasmussen, Pankaj Barah, Maria Cristina Suarez-Rodriguez, Simon Bressendorff, Pia Friis, Paolo Costantino, Atle M. Bones, Henrik Bjørn Nielsen, John Mundy

    Published 2013
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  14. 14
    Benchmarking of Methods for Genomic Taxonomy

    Benchmarking of Methods for Genomic Taxonomy by Mette Voldby Larsen, Salvatore Cosentino, Oksana Lukjančenko, Dhany Saputra, Simon Rasmussen, Henrik Hasman, Thomas Sicheritz‐Pontén, Frank M. Aarestrup, David W. Ussery, Ole Lund

    Published 2014
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  15. 15
    Activation of Autophagy by α-Herpesviruses in Myeloid Cells Is Mediated by Cytoplasmic Viral DNA through a Mechanism Dependent on Stimulator of IFN Genes

    Activation of Autophagy by α-Herpesviruses in Myeloid Cells Is Mediated by Cytoplasmic Viral DNA through a Mechanism Dependent on Stimulator of IFN Genes by Simon Rasmussen, Kristy Horan, Christian K. Holm, Amanda J. Stranks, Thomas C. Mettenleiter, Anna Katharina Simon, Søren B. Jensen, Frazer J. Rixon, Bin He, Søren R. Paludan

    Published 2011
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  16. 16
    Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria

    Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria by Mette Voldby Larsen, Salvatore Cosentino, Simon Rasmussen, Carsten Friis, Henrik Hasman, Rasmus L. Marvig, Lars Jelsbak, Thomas Sicheritz‐Pontén, David W. Ussery, Frank M. Aarestrup, Ole Lund

    Published 2012
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  17. 17
    Meta-genomic analysis of toilet waste from long distance flights; a step towards global surveillance of infectious diseases and antimicrobial resistance

    Meta-genomic analysis of toilet waste from long distance flights; a step towards global surveillance of infectious diseases and antimicrobial resistance by Thomas Nordahl Petersen, Simon Rasmussen, Henrik Hasman, Christian Carøe, Jacob Bælum, Anna Charlotte Schultz, Lasse Bergmark, Christina Aaby Svendsen, Ole Lund, Thomas Sicheritz‐Pontén, Frank M. Aarestrup

    Published 2015
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  18. 18
    Ancient pathogen <scp>DNA</scp> in human teeth and petrous bones

    Ancient pathogen <scp>DNA</scp> in human teeth and petrous bones by Ashot Margaryan, Henrik B. Hansen, Simon Rasmussen, Martin Sikora, Vyacheslav Moiseyev, Alexandr Khoklov, Andrey Epimakhov, Levon Yepiskoposyan, Айвар Крийска, Liivi Varul, Lehti Saag, Niels Lynnerup, Eske Willerslev, Morten E. Allentoft

    Published 2018
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  19. 19
    Improved metagenome binning and assembly using deep variational autoencoders

    Improved metagenome binning and assembly using deep variational autoencoders by Jakob Nybo Nissen, Joachim Johansen, Rosa Lundbye Allesøe, Casper Kaae Sønderby, José Juan Almagro Armenteros, Christopher Heje Grønbech, Lars Juhl Jensen, Henrik Bjørn Nielsen, Thomas Nordahl Petersen, Ole Winther, Simon Rasmussen

    Published 2021
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  20. 20
    Biosynthesis of bioactive diterpenoids in the medicinal plant <i>Vitex agnus‐castus</i>

    Biosynthesis of bioactive diterpenoids in the medicinal plant <i>Vitex agnus‐castus</i> by Allison M. Heskes, Tamil Chelvan Meenakshi Sundram, Berin A. Boughton, Niels Bjerg Jensen, Nikolaj Lervad Hansen, Christoph Crocoll, Federico Cozzi, Simon Rasmussen, Britta Hamberger, Björn Hamberger, Dan Stærk, Birger Lindberg Møller, Irini Pateraki

    Published 2018
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