Rezultati - Shumate, Alaina

Liftoff: accurate mapping of gene annotations od Shumate, Alaina, Salzberg, Steven L

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Improved transcriptome assembly using a hybrid of long and short reads with StringTie od Shumate, Alaina, Wong, Brandon, Pertea, Geo, Pertea, Mihaela

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Chromosome-Scale Assembly of the Bread Wheat Genome Reveals Thousands of Additional Gene Copies od Alonge, Michael, Shumate, Alaina, Puiu, Daniela, Zimin, Aleksey V., Salzberg, Steven L.

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The genome of the American groundhog, Marmota monax od Puiu, Daniela, Zimin, Aleksey, Shumate, Alaina, Ge, Yuchen, Qiu, Jiabin, Bhaskaran, Manoj, Salzberg, Steven L.

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A reference-quality, fully annotated genome from a Puerto Rican individual od Zimin, Aleksey V, Shumate, Alaina, Shinder, Ida, Heinz, Jakob, Puiu, Daniela, Pertea, Mihaela, Salzberg, Steven L

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CHESS: a new human gene catalog curated from thousands of large-scale RNA sequencing experiments reveals extensive transcriptional noise od Pertea, Mihaela, Shumate, Alaina, Pertea, Geo, Varabyou, Ales, Breitwieser, Florian P., Chang, Yu-Chi, Madugundu, Anil K., Pandey, Akhilesh, Salzberg, Steven L.

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Assembly and annotation of an Ashkenazi human reference genome od Shumate, Alaina, Zimin, Aleksey V., Sherman, Rachel M., Puiu, Daniela, Wagner, Justin M., Olson, Nathan D., Pertea, Mihaela, Salit, Marc L., Zook, Justin M., Salzberg, Steven L.

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Epigenetic Patterns in a Complete Human Genome od Gershman, Ariel, Sauria, Michael E.G., Guitart, Xavi, Vollger, Mitchell R., Hook, Paul W., Hoyt, Savannah J., Jain, Miten, Shumate, Alaina, Razaghi, Roham, Koren, Sergey, Altemose, Nicolas, Caldas, Gina V., Logsdon, Glennis A., Rhie, Arang, Eichler, Evan E., Schatz, Michael C., O’Neill, Rachel J., Phillippy, Adam M., Miga, Karen H., Timp, Winston

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A complete reference genome improves analysis of human genetic variation od Aganezov, Sergey, Yan, Stephanie M., Soto, Daniela C., Kirsche, Melanie, Zarate, Samantha, Avdeyev, Pavel, Taylor, Dylan J., Shafin, Kishwar, Shumate, Alaina, Xiao, Chunlin, Wagner, Justin, McDaniel, Jennifer, Olson, Nathan D., Sauria, Michael E. G., Vollger, Mitchell R., Rhie, Arang, Meredith, Melissa, Martin, Skylar, Lee, Joyce, Koren, Sergey, Rosenfeld, Jeffrey A., Paten, Benedict, Layer, Ryan, Chin, Chen-Shan, Sedlazeck, Fritz J., Hansen, Nancy F., Miller, Danny E., Phillippy, Adam M., Miga, Karen H., McCoy, Rajiv C., Dennis, Megan Y., Zook, Justin M., Schatz, Michael C.

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Curated variation benchmarks for challenging medically-relevant autosomal genes od Wagner, Justin, Olson, Nathan D, Harris, Lindsay, McDaniel, Jennifer, Cheng, Haoyu, Fungtammasan, Arkarachai, Hwang, Yih-Chii, Gupta, Richa, Wenger, Aaron M, Rowell, William J, Khan, Ziad M, Farek, Jesse, Zhu, Yiming, Pisupati, Aishwarya, Mahmoud, Medhat, Xiao, Chunlin, Yoo, Byunggil, Sahraeian, Sayed Mohammad Ebrahim, Miller, Danny E., Jáspez, David, Lorenzo-Salazar, José M., Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A., Flores, Carlos, Narzisi, Giuseppe, Evani, Uday Shanker, Clarke, Wayne E., Lee, Joyce, Mason, Christopher E., Lincoln, Stephen E., Miga, Karen H., Ebbert, Mark T. W., Shumate, Alaina, Li, Heng, Chin, Chen-Shan, Zook, Justin M, Sedlazeck, Fritz J

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The complete sequence of a human genome* od Nurk, Sergey, Koren, Sergey, Rhie, Arang, Rautiainen, Mikko, Bzikadze, Andrey V., Mikheenko, Alla, Vollger, Mitchell R., Altemose, Nicolas, Uralsky, Lev, Gershman, Ariel, Aganezov, Sergey, Hoyt, Savannah J., Diekhans, Mark, Logsdon, Glennis A., Alonge, Michael, Antonarakis, Stylianos E., Borchers, Matthew, Bouffard, Gerard G., Brooks, Shelise Y., Caldas, Gina V., Chen, Nae-Chyun, Cheng, Haoyu, Chin, Chen-Shan, Chow, William, de Lima, Leonardo G., Dishuck, Philip C., Durbin, Richard, Dvorkina, Tatiana, Fiddes, Ian T., Formenti, Giulio, Fulton, Robert S., Fungtammasan, Arkarachai, Garrison, Erik, Grady, Patrick G.S., Graves-Lindsay, Tina A., Hall, Ira M., Hansen, Nancy F., Hartley, Gabrielle A., Haukness, Marina, Howe, Kerstin, Hunkapiller, Michael W., Jain, Chirag, Jain, Miten, Jarvis, Erich D., Kerpedjiev, Peter, Kirsche, Melanie, Kolmogorov, Mikhail, Korlach, Jonas, Kremitzki, Milinn, Li, Heng, Maduro, Valerie V., Marschall, Tobias, McCartney, Ann M., McDaniel, Jennifer, Miller, Danny E., Mullikin, James C., Myers, Eugene W., Olson, Nathan D., Paten, Benedict, Peluso, Paul, Pevzner, Pavel A., Porubsky, David, Potapova, Tamara, Rogaev, Evgeny I., Rosenfeld, Jeffrey A., Salzberg, Steven L., Schneider, Valerie A., Sedlazeck, Fritz J., Shafin, Kishwar, Shew, Colin J., Shumate, Alaina, Sims, Ying, Smit, Arian F. A., Soto, Daniela C., Sović, Ivan, Storer, Jessica M., Streets, Aaron, Sullivan, Beth A., Thibaud-Nissen, Françoise, Torrance, James, Wagner, Justin, Walenz, Brian P., Wenger, Aaron, Wood, Jonathan M. D., Xiao, Chunlin, Yan, Stephanie M., Young, Alice C., Zarate, Samantha, Surti, Urvashi, McCoy, Rajiv C., Dennis, Megan Y., Alexandrov, Ivan A., Gerton, Jennifer L., O’Neill, Rachel J., Timp, Winston, Zook, Justin M., Schatz, Michael C., Eichler, Evan E., Miga, Karen H., Phillippy, Adam M.

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