Výsledky vyhledávání - Shashank Sathe

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  1. 1
    Direct RNA sequencing enables m<sup>6</sup>A detection in endogenous transcript isoforms at base-specific resolution

    Direct RNA sequencing enables m<sup>6</sup>A detection in endogenous transcript isoforms at base-specific resolution Autor Daniel A. Lorenz, Shashank Sathe, Jaclyn M. Einstein, G Yeo

    Vydáno 2019
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  2. 2
    A Small RNA-Catalytic Argonaute Pathway Tunes Germline Transcript Levels to Ensure Embryonic Divisions

    A Small RNA-Catalytic Argonaute Pathway Tunes Germline Transcript Levels to Ensure Embryonic Divisions Autor Adina Gerson‐Gurwitz, Shaohe Wang, Shashank Sathe, Rebecca A. Green, G Yeo, Karen Oegema, Arshad Desai

    Vydáno 2016
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  3. 3
    Pseudouridine synthases modify human pre-mRNA co-transcriptionally and affect pre-mRNA processing

    Pseudouridine synthases modify human pre-mRNA co-transcriptionally and affect pre-mRNA processing Autor Nicole M. Martínez, Amanda Su, Margaret C. Burns, Julia K. Nussbacher, Cassandra Schaening-Burgos, Shashank Sathe, G Yeo, Wendy V. Gilbert

    Vydáno 2022
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  4. 4
    Enhanced CLIP Uncovers IMP Protein-RNA Targets in Human Pluripotent Stem Cells Important for Cell Adhesion and Survival

    Enhanced CLIP Uncovers IMP Protein-RNA Targets in Human Pluripotent Stem Cells Important for Cell Adhesion and Survival Autor Anne E. Conway, Eric L. Van Nostrand, Gabriel A. Pratt, Stefan Aigner, Melissa L. Wilbert, Balaji Sundararaman, Peter Freese, Nicole Lambert, Shashank Sathe, Tiffany Y Liang, Anthony Essex, Séverine Landais, Christopher B. Burge, D. Leanne Jones, G Yeo

    Vydáno 2016
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  5. 5
    Transcriptome-wide profiles of circular RNA and RNA-binding protein interactions reveal effects on circular RNA biogenesis and cancer pathway expression

    Transcriptome-wide profiles of circular RNA and RNA-binding protein interactions reveal effects on circular RNA biogenesis and cancer pathway expression Autor Trine Line Hauge Okholm, Shashank Sathe, Samuel S. Park, Andreas Bjerregaard Kamstrup, Asta Mannstaedt Rasmussen, Archana Shankar, Zong Ming Chua, Niels Fristrup, Morten Muhlig Nielsen, Søren Vang, Lars Dyrskjøt, Stefan Aigner, Christian Kroun Damgaard, G Yeo, Jakob Skou Pedersen

    Vydáno 2020
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  6. 6
    Large-scale tethered function assays identify factors that regulate mRNA stability and translation

    Large-scale tethered function assays identify factors that regulate mRNA stability and translation Autor En‐Ching Luo, Jason L. Nathanson, Frederick E. Tan, Joshua L. Schwartz, Jonathan C. Schmok, Archana Shankar, Sebastian Markmiller, Brian A. Yee, Shashank Sathe, Gabriel A. Pratt, Duy B. Scaletta, Yuanchi Ha, David E. Hill, Stefan Aigner, G Yeo

    Vydáno 2020
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  7. 7
    RNA-binding protein CPEB1 remodels host and viral RNA landscapes

    RNA-binding protein CPEB1 remodels host and viral RNA landscapes Autor Ranjan Batra, Thomas Stark, Alex E. Clark, Jean-Philippe Belzile, Emily C. Wheeler, Brian A. Yee, Hui Huang, Chelsea Gelboin-Burkhart, Stephanie C. Huelga, Stefan Aigner, Brett Roberts, Tomas Bos, Shashank Sathe, John P. Donohue, Frank Rigo, Manuel Ares, Deborah H. Spector, G Yeo

    Vydáno 2016
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  8. 8
    Context-dependent functional compensation between Ythdf m<sup>6</sup>A reader proteins

    Context-dependent functional compensation between Ythdf m<sup>6</sup>A reader proteins Autor Lior Lasman, Vladislav Krupalnik, Sergey Viukov, Nofar Mor, Alejandro Aguilera-Castrejon, Dan Schneir, Jonathan Bayerl, Orel Mizrahi, Shani Peles, Shadi Tawil, Shashank Sathe, Aharon Nachshon, Tom Shani, Mirie Zerbib, Itay Kilimnik, Stefan Aigner, Archana Shankar, Jasmine R. Mueller, Schraga Schwartz, Noam Stern-Ginossar, G Yeo, Shay Geula, Noa Novershtern, Jacob H. Hanna

    Vydáno 2020
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  9. 9
    Gain-of-function cardiomyopathic mutations in RBM20 rewire splicing regulation and re-distribute ribonucleoprotein granules within processing bodies

    Gain-of-function cardiomyopathic mutations in RBM20 rewire splicing regulation and re-distribute ribonucleoprotein granules within processing bodies Autor Aidan M. Fenix, Yuichiro Miyaoka, Alessandro Bertero, Steven M. Blue, Matthew Spindler, Kenneth K. B. Tan, Juan A. Pérez-Bermejo, Amanda H. Chan, Steven J. Mayerl, Trieu Nguyen, Caitlin R. Russell, Paweena Lizarraga, Annie Truong, Po-Lin So, Aishwarya Kulkarni, Kashish Chetal, Shashank Sathe, Nathan J. Sniadecki, G Yeo, Charles E. Murry, Bruce R. Conklin, Nathan Salomonis

    Vydáno 2021
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  10. 10
    A Large-Scale Binding and Functional Map of Human RNA Binding Proteins

    A Large-Scale Binding and Functional Map of Human RNA Binding Proteins Autor Eric L. Van Nostrand, Peter Freese, Gabriel A. Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M. Blue, Jiayu Chen, Neal Cody, Daniel Domínguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O. Duff, Keri E. Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole Lambert, Hairi Li, Thai B. Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A. Yee, Bing Zhou, Ashley L. Louie, Stefan Aigner, Xiang‐Dong Fu, Éric Lécuyer, Christopher B. Burge, Brenton R. Graveley, G Yeo

    Vydáno 2017
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  11. 11
    A large-scale binding and functional map of human RNA-binding proteins

    A large-scale binding and functional map of human RNA-binding proteins Autor Eric L. Van Nostrand, Peter Freese, Henry Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M. Blue, Jiayu Chen, Neal Cody, Daniel Domínguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O. Duff, Keri E. Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole Lambert, Hairi Li, Michael P. McGurk, Thai B. Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A. Yee, Bing Zhou, Ashley L. Louie, Stefan Aigner, Xiang‐Dong Fu, Éric Lécuyer, Christopher B. Burge, Brenton R. Graveley, G Yeo

    Vydáno 2020
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  12. 12
    Genomic epidemiology identifies emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States

    Genomic epidemiology identifies emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States Autor Nicole L. Washington, Karthik Gangavarapu, Mark Zeller, Alexandre Bolze, Elizabeth T. Cirulli, Kelly M. Schiabor Barrett, Brendan B. Larsen, Catelyn Anderson, Simon White, Tyler Cassens, Sharoni Jacobs, Geraint Levan, Jason Nguyen, Jimmy M. Ramirez, Charlotte Rivera-Garcia, Efren Sandoval, Xueqing Wang, David Wong, Emily Spencer, Refugio Robles‐Sikisaka, Ezra Kurzban, Laura D. Hughes, Xianding Deng, Candace Wang, Venice Servellita, Holly Valentine, Peter De Hoff, Phoebe Seaver, Shashank Sathe, Kimberly Gietzen, Brad Sickler, Jay Antico, Kelly Hoon, Jianwen Liu, Aaron Harding, Omid Bakhtar, Tracy Basler, Brett Austin, Magnus Isaksson, Phillip G. Febbo, David G. Becker, Marc Laurent, Eric McDonald, G Yeo, Rob Knight, Louise C. Laurent, Eileen de Feo, Michael Worobey, Charles Y. Chiu, Marc A. Suchard, James T. Lu, William Lee, Kristian G. Andersen

    Vydáno 2021
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  13. 13
    Emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States

    Emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States Autor Nicole L. Washington, Karthik Gangavarapu, Mark Zeller, Alexandre Bolze, Elizabeth T. Cirulli, Kelly M. Schiabor Barrett, Brendan B. Larsen, Catelyn Anderson, Simon White, Tyler Cassens, Sharoni Jacobs, Geraint Levan, Jason Nguyen, Jimmy M. Ramirez, Charlotte Rivera-Garcia, Efren Sandoval, Xueqing Wang, David Wong, Emily Spencer, Refugio Robles‐Sikisaka, Ezra Kurzban, Laura D. Hughes, Xianding Deng, Candace Wang, Venice Servellita, Holly Valentine, Peter De Hoff, Phoebe Seaver, Shashank Sathe, Kimberly Gietzen, Brad Sickler, Jay Antico, Kelly Hoon, Jianwen Liu, Aaron Harding, Omid Bakhtar, Tracy Basler, Brett Austin, Duncan MacCannell, Magnus Isaksson, Phillip G. Febbo, David G. Becker, Marc Laurent, Eric McDonald, G Yeo, Rob Knight, Louise C. Laurent, Eileen de Feo, Michael Worobey, Charles Y. Chiu, Marc A. Suchard, James T. Lu, William Lee, Kristian G. Andersen

    Vydáno 2021
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  14. 14
    Biallelic mutations in the 3′ exonuclease TOE1 cause pontocerebellar hypoplasia and uncover a role in snRNA processing

    Biallelic mutations in the 3′ exonuclease TOE1 cause pontocerebellar hypoplasia and uncover a role in snRNA processing Autor Rea M. Lardelli, Ashleigh E. Schaffer, Veerle Rc Eggens, Maha S. Zaki, Stephanie Grainger, Shashank Sathe, Eric L. Van Nostrand, Zinayida Schlachetzki, Başak Rosti, Naiara Akizu, Eric Scott, Jennifer L. Silhavy, Laura D. Heckman, Rasim Özgür Rosti, Esra Dikoglu, Anne Gregor, Alicia Guemez‐Gamboa, Damir Musaev, Rohit Mande, Ari Widjaja, Timothy Shaw, Sebastian Markmiller, Isaac Marin‐Valencia, Justin H. Davies, Linda De Meırleır, Hülya Kayserili, Umut Altunoğlu, Mary Louise Freckmann, Linda Warwick, David Chitayat, Susan Blasér, Ahmet Okay Çağlayan, Kaya Bilgüvar, Hüseyin Per, Christina Fagerberg, Henrik Thybo Christesen, Maria Kibæk, Kimberly A. Aldinger, David K. Manchester, Naomichi Matsumoto, Kazuhiro Muramatsu, Hirotomo Saitsu, Masaaki Shiina, Kazuhiro Ogata, Nicola Foulds, William B. Dobyns, C. Neil, David Traver, Luigina Spaccini, Stefania Maria Bova, Stacey B. Gabriel, Murat Günel, Enza Maria Valente, Marie‐Cécile Nassogne, Eric J. Bennett, G Yeo, Frank Baas, Jens Lykke‐Andersen, Joseph G. Gleeson

    Vydáno 2017
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  15. 15
    Safer at school early alert: an observational study of wastewater and surface monitoring to detect COVID-19 in elementary schools

    Safer at school early alert: an observational study of wastewater and surface monitoring to detect COVID-19 in elementary schools Autor Rebecca Fielding‐Miller, Smruthi Karthikeyan, Tommi Gaines, Richard S. Garfein, Rodolfo A. Salido, Victor Cantu, Laura Kohn, Natasha K. Martin, Adriane Wynn, Carrissa Wijaya, Marlene Flores, Vinton Omaleki, Araz Majnoonian, Patricia González‐Zúñiga, Megan Nguyen, Anh Van Vo, Tina Le, Dawn Duong, Ashkan Hassani, Samantha Tweeten, Kristen Jepsen, Benjamin Henson, Abbas Hakim, Amanda Birmingham, Peter De Hoff, Adam M. Mark, Chanond A. Nasamran, Sara Brin Rosenthal, Niema Moshiri, Kathleen M. Fisch, Greg Humphrey, Sawyer Farmer, Helena M. Tubb, Tommy Valles, Justin Morris, Jaeyoung Kang, Behnam Khaleghi, Colin Young, Ameen Akel, Sean Eilert, Justin Eno, Ken Curewitz, Louise C. Laurent, Tajana Rosing, Rob Knight, Nathan A. Baer, Tom Barber, Anelizze Castro-Martínez, Marisol Chacón, Willi Cheung, Evelyn S. Crescini, Emily Eisner, Lizbeth Franco Vargas, Abbas Hakim, Charlotte A. Hobbs, Alma L. Lastrella, Elijah S. Lawrence, Nathaniel L. Matteson, Karthik Gangavarapu, Toan T. Ngo, Phoebe Seaver, Elizabeth W. Smoot, Rebecca Tsai, Bing Xia, Stefan Aigner, Catelyn Anderson, Pedro Belda‐Ferre, Shashank Sathe, Mark Zeller, Kristian G. Andersen, G Yeo, Ezra Kurzban

    Vydáno 2023
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  16. 16
    Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission

    Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission Autor Smruthi Karthikeyan, Joshua I. Levy, Peter De Hoff, Greg Humphrey, Amanda Birmingham, Kristen Jepsen, Sawyer Farmer, Helena M. Tubb, Tommy Valles, Caitlin Tribelhorn, Rebecca Tsai, Stefan Aigner, Shashank Sathe, Niema Moshiri, Benjamin Henson, Adam M. Mark, Abbas Hakim, Nathan A. Baer, Tom Barber, Pedro Belda‐Ferre, Marisol Chacón, Willi Cheung, Evelyn S. Cresini, Emily Eisner, Alma L. Lastrella, Elijah S. Lawrence, Clarisse Marotz, Toan T. Ngo, Tyler Ostrander, Ashley Plascencia, Rodolfo A. Salido, Phoebe Seaver, Elizabeth W. Smoot, Daniel McDonald, Robert M. Neuhard, Angela L. Scioscia, Alysson M. Satterlund, Elizabeth H. Simmons, Dismas B. Abelman, David A. Brenner, Judith C. Bruner, Anne F. Buckley, M. Ellison, Jeffrey Gattas, Steven L. Gonias, Matt Hale, Faith Hawkins, Lydia Ikeda, Hemlata Jhaveri, Ted W. Johnson, Vince Kellen, Brendan Kremer, Gary Matthews, Ronald W. McLawhon, Pierre Ouillet, Daniel Park, Allorah Pradenas, Sharon L. Reed, Lindsay Riggs, Alison Sanders, Bradley Sollenberger, Angela Song, Benjamin L. White, Terri Winbush, Christine M. Aceves, Catelyn Anderson, Karthik Gangavarapu, Emory Hufbauer, Ezra Kurzban, Justin Lee, Nathaniel L. Matteson, Edyth Parker, Sarah A. Perkins, Karthik Ramesh, Refugio Robles‐Sikisaka, Madison A. Schwab, Emily Spencer, Shirlee Wohl, Laura Nicholson, Ian McHardy, David Dimmock, Charlotte A. Hobbs, Omid Bakhtar, Aaron Harding, Art Mendoza, Alexandre Bolze, David G. Becker, Elizabeth T. Cirulli, Magnus Isaksson, Kelly M. Schiabor Barrett, Nicole L. Washington, John D. Malone, Ashleigh Murphy Schafer, Nikos Gurfield, Sarah Stous, Rebecca Fielding‐Miller, Richard S. Garfein, Tommi Gaines, Cheryl A.M. Anderson, Natasha K. Martin

    Vydáno 2022
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