檢索結果 - Serghei Mangul

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  1. 1
    Estimation of alternative splicing isoform frequencies from RNA-Seq data

    Estimation of alternative splicing isoform frequencies from RNA-Seq data 由 Marius Nicolae, Serghei Mangul, Ion Măndoiu, Alex Zelikovsky

    出版 2011
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  2. 2
    A Comprehensive Map of Genetic Variation in the World’s Largest Ethnic Group—Han Chinese

    A Comprehensive Map of Genetic Variation in the World’s Largest Ethnic Group—Han Chinese 由 Charleston W. K. Chiang, Serghei Mangul, Christopher R. Robles, Sriram Sankararaman

    出版 2018
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  3. 3
    Metalign: efficient alignment-based metagenomic profiling via containment min hash

    Metalign: efficient alignment-based metagenomic profiling via containment min hash 由 Nathan LaPierre, Mohammed Alser, Eleazar Eskin, David Koslicki, Serghei Mangul

    出版 2020
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  4. 4
    Inferring viral quasispecies spectra from 454 pyrosequencing reads

    Inferring viral quasispecies spectra from 454 pyrosequencing reads 由 Irina Astrovskaya, Bassam Tork, Serghei Mangul, Kelly Westbrooks, Ion Măndoiu, Peter Balfe, Alex Zelikovsky

    出版 2011
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  5. 5
    The Gene Expression Deconvolution Interactive Tool (GEDIT): accurate cell type quantification from gene expression data

    The Gene Expression Deconvolution Interactive Tool (GEDIT): accurate cell type quantification from gene expression data 由 Brian B. Nadel, David López, Dennis Montoya, Feiyang Ma, Hannah Waddel, Misha M. Khan, Serghei Mangul, Matteo Pellegrini

    出版 2021
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  6. 6
    Genomic reproducibility in the bioinformatics era

    Genomic reproducibility in the bioinformatics era 由 Pelin Icer Baykal, Paweł P. Łabaj, Florian Markowetz, Lynn M. Schriml, Daniel J. Stekhoven, Serghei Mangul, Niko Beerenwinkel

    出版 2024
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  7. 7
    Systematic benchmarking of omics computational tools

    Systematic benchmarking of omics computational tools 由 Serghei Mangul, Lana S. Martin, Brian L. Hill, Angela Ka-Mei Lam, Margaret G. Distler, Alex Zelikovsky, Eleazar Eskin, Jonathan Flint

    出版 2019
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  8. 8
    The knowns and unknowns of long COVID-19: from mechanisms to therapeutical approaches

    The knowns and unknowns of long COVID-19: from mechanisms to therapeutical approaches 由 Roxana Gheorghiţă, Iuliana Șoldănescu, Andrei Lobiuc, Olga Adriana Căliman-Sturdza, Roxana Filip, Adela Constantinescu – Bercu, Mihai Dimian, Serghei Mangul, Mihai Covașă

    出版 2024
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  9. 9
    CRISPR-Mediated VHL Knockout Generates an Improved Model for Metastatic Renal Cell Carcinoma

    CRISPR-Mediated VHL Knockout Generates an Improved Model for Metastatic Renal Cell Carcinoma 由 Shiruyeh Schokrpur, Junhui Hu, Diana Moughon, Peijun Liu, Lucia Christiana Lin, Kip Hermann, Serghei Mangul, Wei Guan, Matteo Pellegrini, Hua Xu, Lily Wu

    出版 2016
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  10. 10
    Accurate assembly of minority viral haplotypes from next-generation sequencing through efficient noise reduction

    Accurate assembly of minority viral haplotypes from next-generation sequencing through efficient noise reduction 由 Sergey Knyazev, Viachaslau Tsyvina, Anupama Shankar, Andrew Melnyk, Alexander Artyomenko, Tatiana Malygina, Yuri B. Porozov, Ellsworth M. Campbell, William M. Switzer, Pavel Skums, Serghei Mangul, Alex Zelikovsky

    出版 2021
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  11. 11
    Technology dictates algorithms: recent developments in read alignment

    Technology dictates algorithms: recent developments in read alignment 由 Mohammed Alser, Jeremy Rotman, Dhrithi Deshpande, Kodi Taraszka, Huwenbo Shi, Pelin Icer Baykal, Harry Taegyun Yang, Victor Xue, Sergey Knyazev, Benjamin D. Singer, Brunilda Balliu, David Koslicki, Pavel Skums, Alex Zelikovsky, Can Alkan, Onur Mutlu, Serghei Mangul

    出版 2021
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  12. 12
    RNA-seq data science: From raw data to effective interpretation

    RNA-seq data science: From raw data to effective interpretation 由 Dhrithi Deshpande, Karishma Chhugani, Yutong Chang, Aaron Karlsberg, Caitlin Loeffler, Jinyang Zhang, Agata Muszyńska, Viorel Munteanu, Harry Taegyun Yang, Jeremy Rotman, Laura Tao, Brunilda Balliu, Elizabeth Tseng, Eleazar Eskin, Fangqing Zhao, Pejman Mohammadi, Paweł P. Łabaj, Serghei Mangul

    出版 2023
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  13. 13
    Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia

    Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia 由 Loes M. Olde Loohuis, Serghei Mangul, Anil P. S. Ori, Guillaume Jospin, David Koslicki, Harry Taegyun Yang, Timothy Wu, Marco P. Boks, Catherine Lomen‐Hoerth, Martina Wiedau‐Pazos, Rita M. Cantor, Willem M. de Vos, René S. Kahn, Eleazar Eskin, Roel A. Ophoff

    出版 2018
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  14. 14
    Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing

    Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing 由 Igor Mandric, Jeremy Rotman, Harry Taegyun Yang, Nicolas Strauli, Dennis Montoya, William Van Der Wey, Jiem R. Ronas, Benjamin Statz, Douglas Yao, Velislava Petrova, Alex Zelikovsky, Roberto Spreafico, Sagiv Shifman, Noah Zaitlen, Maura Rossetti, K. Mark Ansel, Eleazar Eskin, Serghei Mangul

    出版 2020
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  15. 15
    Intratumoral CD4+ T Cells Mediate Anti-tumor Cytotoxicity in Human Bladder Cancer

    Intratumoral CD4+ T Cells Mediate Anti-tumor Cytotoxicity in Human Bladder Cancer 由 David Y. Oh, Serena S. Kwek, Siddharth S. Raju, Tony Li, Elizabeth McCarthy, Eric D. Chow, Dvir Aran, Arielle Ilano, Chien-Chun Steven Pai, Chiara Rancan, Kathryn M. Allaire, Arun Burra, Yang Sun, Matthew H. Spitzer, Serghei Mangul, Sima P. Porten, Maxwell V. Meng, Terence W. Friedlander, Chun Ye, Lawrence Fong

    出版 2020
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  16. 16
    ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues

    ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues 由 Serghei Mangul, Harry Taegyun Yang, Nicolas Strauli, Franziska Gruhl, Hagit T. Porath, Kevin Hsieh, Linus Chen, Timothy Daley, S. Christenson, Agata Wesolowska‐Andersen, Roberto Spreafico, Cydney Rios, Celeste Eng, Andrew D. Smith, Ryan D. Hernandez, Roel A. Ophoff, Jose Rodriguez Santana, Erez Y. Levanon, Prescott G. Woodruff, Esteban G. Burchard, Max A. Seibold, Sagiv Shifman, Eleazar Eskin, Noah Zaitlen

    出版 2018
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  17. 17
    Benchmarking of computational error-correction methods for next-generation sequencing data

    Benchmarking of computational error-correction methods for next-generation sequencing data 由 Keith Mitchell, Jaqueline Brito, Igor Mandric, Qiaozhen Wu, Sergey Knyazev, Sei Chang, Lana S. Martin, Aaron Karlsberg, Ekaterina S. Gerasimov, Russell Littman, Brian L. Hill, Nicholas C. Wu, Harry Taegyun Yang, Kevin Li‐Chun Hsieh, Linus Chen, Eli Littman, Taylor Shabani, German Enik, Douglas Yao, Ren Sun, Jan Schroeder, Eleazar Eskin, Alex Zelikovsky, Pavel Skums, Mihai Pop, Serghei Mangul

    出版 2020
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  18. 18
    Cell type specific genetic regulation of gene expression across human tissues

    Cell type specific genetic regulation of gene expression across human tissues 由 Sarah Kim-Hellmuth, François Aguet, Meritxell Oliva, Manuel Muñoz-Aguirre, Valentin Wucher, Silva Kasela, Stephane E. Castel, Andrew R. Hamel, Ana Viñuela, Amy L. Roberts, Serghei Mangul, Xiaoquan Wen, Gao Wang, Alvaro Barbeira, Diego Garrido-Martín, Brian B. Nadel, Yuxin Zou, Rodrigo Bonazzola, Jie Quan, Andrew Brown, Ángel Martínez-Pérez, José Manuel Soria, Gad Getz, Emmanouil T. Dermitzakis, Kerrin S. Small, Matthew Stephens, Hualin Simon Xi, Hae Kyung Im, Roderic Guigó, Ayellet V. Segrè, Barbara E. Stranger, Kristin Ardlie, Tuuli Lappalainen

    出版 2019
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  19. 19
    Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure

    Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure 由 Halie M. Rando, Adam L. MacLean, Alexandra Lee, Ronan Lordan, Sandipan Ray, V. Bansal, Ashwin N. Skelly, Elizabeth Sell, John J. Dziak, Lamonica Shinholster, Lucy D’Agostino McGowan, Marouen Ben Guebila, Nils Wellhausen, Sergey Knyazev, Simina M. Boca, Stephen Capone, Yanjun Qi, YoSon Park, David Mai, Yuchen Sun, Joel D. Boerckel, Christian Brueffer, James Brian Byrd, Jeremy P. Kamil, Jinhui Wang, Ryan Velazquez, Gregory L. Szeto, John P. Barton, Rishi R. Goel, Serghei Mangul, Tiago Lubiana, Anthony Gitter, Casey S. Greene

    出版 2021
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  20. 20
    Correction for Rando et al., “Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure”

    Correction for Rando et al., “Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure” 由 Halie M. Rando, Adam L. MacLean, Alexandra Lee, Ronan Lordan, Sandipan Ray, V. Bansal, Ashwin N. Skelly, Elizabeth Sell, John J. Dziak, Lamonica Shinholster, Lucy D’Agostino McGowan, Marouen Ben Guebila, Nils Wellhausen, Sergey Knyazev, Simina M. Boca, Stephen Capone, Yanjun Qi, YoSon Park, David Mai, Yuchen Sun, Joel D. Boerckel, Christian Brueffer, James Brian Byrd, Jeremy P. Kamil, Jinhui Wang, Ryan Velazquez, Gregory L. Szeto, John P. Barton, Rishi R. Goel, Serghei Mangul, Tiago Lubiana, Anthony Gitter, Casey S. Greene

    出版 2022
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