Search Results - Scott Emrich

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  1. 1
    Assessing De Novo transcriptome assembly metrics for consistency and utility

    Assessing De Novo transcriptome assembly metrics for consistency and utility by Shawn T. O’Neil, Scott Emrich

    Published 2013
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  2. 2
    Gene discovery and annotation using LCM-454 transcriptome sequencing

    Gene discovery and annotation using LCM-454 transcriptome sequencing by Scott Emrich, W. Brad Barbazuk, Li Li, Patrick S. Schnable

    Published 2006
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  3. 3
    %MinMax: A versatile tool for calculating and comparing synonymous codon usage and its impact on protein folding

    %MinMax: A versatile tool for calculating and comparing synonymous codon usage and its impact on protein folding by Anabel Rodríguez, Gabriel Wright, Scott Emrich, Patricia L. Clark

    Published 2017
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  4. 4
    SNP discovery via 454 transcriptome sequencing

    SNP discovery via 454 transcriptome sequencing by W. Brad Barbazuk, Scott Emrich, Hsin D. Chen, Li Li, Patrick S. Schnable

    Published 2007
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  5. 5
    Population-level transcriptome sequencing of nonmodel organisms Erynnis propertius and Papilio zelicaon

    Population-level transcriptome sequencing of nonmodel organisms Erynnis propertius and Papilio zelicaon by Shawn T. O’Neil, Jason D. K. Dzurisin, Rory Carmichael, Neil F. Lobo, Scott Emrich, Jessica J. Hellmann

    Published 2010
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  6. 6
    Chromosomal inversions and ecotypic differentiation in <i>Anopheles gambiae</i>: the perspective from whole‐genome sequencing

    Chromosomal inversions and ecotypic differentiation in <i>Anopheles gambiae</i>: the perspective from whole‐genome sequencing by R. Rebecca Love, Aaron Steele, Mamadou B. Coulibaly, Sékou F. Traorè, Scott Emrich, Michaël C. Fontaine, Nora J. Besansky

    Published 2016
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  7. 7
    Widespread position-specific conservation of synonymous rare codons within coding sequences

    Widespread position-specific conservation of synonymous rare codons within coding sequences by Julie L. Chaney, Aaron Steele, Rory Carmichael, Anabel Rodríguez, Alicia T. Specht, K Y Ngo, Jun Li, Scott Emrich, Patricia L. Clark

    Published 2017
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  8. 8
    High-Throughput Genetic Mapping of Mutants via Quantitative Single Nucleotide Polymorphism Typing

    High-Throughput Genetic Mapping of Mutants via Quantitative Single Nucleotide Polymorphism Typing by Sanzhen Liu, Hsin D. Chen, Irina Makarevitch, Rebecca Shirmer, Scott Emrich, Charles R. Dietrich, W. Brad Barbazuk, Nathan M. Springer, Patrick S. Schnable

    Published 2009
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  9. 9
    Experimental evidence of genome‐wide impact of ecological selection during early stages of speciation‐with‐gene‐flow

    Experimental evidence of genome‐wide impact of ecological selection during early stages of speciation‐with‐gene‐flow by Scott P. Egan, Gregory J. Ragland, Lauren A. Assour, Thomas H. Q. Powell, Glen R. Hood, Scott Emrich, Patrik Nosil, Jeffrey L. Feder

    Published 2015
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  10. 10
    VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases

    VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases by Gloria I. Giraldo-Calderón, Scott Emrich, Robert M. MacCallum, G. Maslen, Emmanuel Dialynas, Pantelis Topalis, Nicholas Ho, Sandra Gesing, Gregory R. Madey, Frank H. Collins, Daniel Lawson

    Published 2014
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  11. 11
    Genetic mapping of fitness determinants across the malaria parasite Plasmodium falciparum life cycle

    Genetic mapping of fitness determinants across the malaria parasite Plasmodium falciparum life cycle by Xue Li, Sudhir Kumar, Marina McDew‐White, Meseret T. Haile, Ian H. Cheeseman, Scott Emrich, Katrina A. Button-Simons, François Nosten, Stefan H. I. Kappe, Michael T. Ferdig, Tim Anderson, Ashley M. Vaughan

    Published 2019
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  12. 12
    The Evolution of the <i>Anopheles</i> 16 Genomes Project

    The Evolution of the <i>Anopheles</i> 16 Genomes Project by Daniel E. Neafsey, George K. Christophides, Frank H. Collins, Scott Emrich, Michaël C. Fontaine, William M Gelbart, Matthew W. Hahn, Paul Howell, Fotis C. Kafatos, Daniel Lawson, Marc A. T. Muskavitch, Robert M. Waterhouse, Louise Williams, Nora J. Besansky

    Published 2013
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  13. 13
    A molecular mechanism of artemisinin resistance in Plasmodium falciparum malaria

    A molecular mechanism of artemisinin resistance in Plasmodium falciparum malaria by Alassane Mbengue, Souvik Bhattacharjee, Trupti Pandharkar, Haining Liu, Guillermina Estiú, Robert V. Stahelin, Shahir S. Rizk, Dieudonné Lemuh Njimoh, Yana Ryan, Kesinee Chotivanich, Chea Nguon, Mehdi Ghorbal, José-Juan Lopez-Rubio, Michael E. Pfrender, Scott Emrich, Narla Mohandas, Arjen M. Dondorp, Olaf Wiest, Kasturi Haldar

    Published 2015
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  14. 14
    Whole genome comparisons reveal panmixia among fall armyworm (<i>Spodoptera frugiperda</i>) from diverse locations

    Whole genome comparisons reveal panmixia among fall armyworm (<i>Spodoptera frugiperda</i>) from diverse locations by Katrina Schlum, Kurt Lamour, Caroline Placidi De Bortoli, R. Banerjee, Scott Emrich, Robert L. Meagher, Eliseu José Guedes Pereira, María Gabriela Murúa, Gregory A. Sword, Ashley E. Tessnow, Diego Viteri Dillon, Angela M. Linares Ramirez, Komivi Senyo Akutse, Rebecca A Schmidt‐Jeffris, Fangneng Huang, Dominic Reisig, Juan Luis Jurat‐Fuentes

    Published 2020
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  15. 15
    Whole genome comparisons reveal panmixia among fall armyworm (Spodoptera frugiperda) from diverse locations

    Whole genome comparisons reveal panmixia among fall armyworm (Spodoptera frugiperda) from diverse locations by Katrina Schlum, Kurt Lamour, Caroline Placidi De Bortoli, R. Banerjee, Robert L. Meagher, Eliseu José Guedes Pereira, María Gabriela Murúa, Gregory A. Sword, Ashley E. Tessnow, Diego Viteri Dillon, Angela M. Linares Ramirez, Komivi Senyo Akutse, Rebecca A Schmidt‐Jeffris, Fangneng Huang, Dominic Reisig, Scott Emrich, Juan Luis Jurat‐Fuentes

    Published 2021
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  16. 16
    Extensive introgression in a malaria vector species complex revealed by phylogenomics

    Extensive introgression in a malaria vector species complex revealed by phylogenomics by Michaël C. Fontaine, James B. Pease, Aaron Steele, Robert M. Waterhouse, Daniel E. Neafsey, Igor V. Sharakhov, Xiaofang Jiang, A. Brantley Hall, Flaminia Catteruccia, Evdoxia G. Kakani, Sara N. Mitchell, Yi-Chieh Wu, Hilary A. Smith, R. Rebecca Love, Mara Lawniczak, Michel A Slotman, Scott Emrich, Matthew W. Hahn, Nora J. Besansky

    Published 2014
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  17. 17
    Phlebotomus papatasi SP15: mRNA expression variability and amino acid sequence polymorphisms of field populations

    Phlebotomus papatasi SP15: mRNA expression variability and amino acid sequence polymorphisms of field populations by Marcelo Ramalho-Ortigão, Iliano V. Coutinho-Abreu, Valdir de Queiroz Balbino, Carlos Alberto Santiago Figueirêdo, Rami Mukbel, Hussan Dayem, Hanafi A. Hanafi, Shabaan S. El-Hossary, Emad El-Din Y. Fawaz, Mahmoud N. Abo‐Shehada, David F. Hoel, Gwen Stayback, Mariha Wadsworth, Douglas A. Shoue, Jenica Abrudan, Neil F. Lobo, Andrew R. Mahon, Scott Emrich, Shaden Kamhawi, Frank H. Collins, Mary Ann McDowell

    Published 2015
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  18. 18
    Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies

    Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies by Robert M. Waterhouse, Sergey Aganezov, Yoann Anselmetti, Jiyoung Lee, Livio Ruzzante, Maarten Reijnders, Romain Feron, Sèverine Bérard, Phillip George, Matthew W. Hahn, Paul Howell, Maryam Kamali, Sergey Koren, Daniel Lawson, G. Maslen, Ashley Peery, Adam M. Phillippy, Maria V. Sharakhova, Éric Tannier, Maria Unger, Simo V. Zhang, Max A. Alekseyev, Nora J. Besansky, Cédric Chauve, Scott Emrich, Igor V. Sharakhov

    Published 2020
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  19. 19
    Radical remodeling of the Y chromosome in a recent radiation of malaria mosquitoes

    Radical remodeling of the Y chromosome in a recent radiation of malaria mosquitoes by A. Brantley Hall, Philippos Aris Papathanos, Atashi Sharma, Changde Cheng, Omar S. Akbari, Lauren A. Assour, Nicholas H. Bergman, Alessia Cagnetti, Andrea Crisanti, Tania Dottorini, Elisa Fiorentini, Roberto Galizi, Jonathan Hnath, Xiaofang Jiang, Sergey Koren, Tony Nolan, Diane Radune, Maria V. Sharakhova, Aaron Steele, Vladimir A. Timoshevskiy, Nikolai Windbichler, Simo Zhang, Matthew W. Hahn, Adam M. Phillippy, Scott Emrich, Igor V. Sharakhov, Zhijian Tu, Nora J. Besansky

    Published 2016
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  20. 20
    Widespread Divergence Between Incipient <i>Anopheles gambiae</i> Species Revealed by Whole Genome Sequences

    Widespread Divergence Between Incipient <i>Anopheles gambiae</i> Species Revealed by Whole Genome Sequences by Mara Lawniczak, Scott Emrich, Alisha K. Holloway, Allison Regier, Mark A. Olson, Bradley J. White, Seth Redmond, Lucinda Fulton, Elizabeth L. Appelbaum, Jennifer Godfrey, Candace N. Farmer, Asif Chinwalla, Shiaw-Pyng Yang, Patrick Minx, Joanne O. Nelson, Kyung Kim, Brian P. Walenz, Edisa García Hernández, Marcus A. M. de Aguiar, Lakshmi Viswanathan, Yu Hui Rogers, R L Strausberg, Christopher Saski, Daniel Lawson, Frank H. Collins, Fotis C. Kafatos, George K. Christophides, Sandra W. Clifton, Ewen F. Kirkness, Nora J. Besansky

    Published 2010
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