检索结果 - Ryan M. Layer

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  1. 1
    Vcfanno: fast, flexible annotation of genetic variants

    Vcfanno: fast, flexible annotation of genetic variants 由 Brent S. Pedersen, Ryan M. Layer, Aaron R. Quinlan

    出版 2016
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  2. 2
    LUMPY: a probabilistic framework for structural variant discovery

    LUMPY: a probabilistic framework for structural variant discovery 由 Ryan M. Layer, Colby Chiang, Aaron R. Quinlan, Ira M. Hall

    出版 2014
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  3. 3
    A map of constrained coding regions in the human genome

    A map of constrained coding regions in the human genome 由 James M. Havrilla, Brent S. Pedersen, Ryan M. Layer, Aaron R. Quinlan

    出版 2018
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  4. 4
    Notch3 and Mef2c Proteins Are Mutually Antagonistic via Mkp1 Protein and miR-1/206 MicroRNAs in Differentiating Myoblasts

    Notch3 and Mef2c Proteins Are Mutually Antagonistic via Mkp1 Protein and miR-1/206 MicroRNAs in Differentiating Myoblasts 由 Jeffrey Gagan, Bijan K. Dey, Ryan M. Layer, Zhen Yan, Anindya Dutta

    出版 2012
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  5. 5
    MicroRNA-378 Targets the Myogenic Repressor MyoR during Myoblast Differentiation

    MicroRNA-378 Targets the Myogenic Repressor MyoR during Myoblast Differentiation 由 Jeffrey Gagan, Bijan K. Dey, Ryan M. Layer, Zhen Yan, Anindya Dutta

    出版 2011
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  6. 6
    GIGGLE: a search engine for large-scale integrated genome analysis

    GIGGLE: a search engine for large-scale integrated genome analysis 由 Ryan M. Layer, Brent S. Pedersen, Tonya DiSera, Gábor Marth, Jason Gertz, Aaron R. Quinlan

    出版 2018
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  7. 7
    Extrachromosomal MicroDNAs and Chromosomal Microdeletions in Normal Tissues

    Extrachromosomal MicroDNAs and Chromosomal Microdeletions in Normal Tissues 由 Yoshiyuki Shibata, Pankaj Kumar, Ryan M. Layer, Smaranda Willcox, Jeffrey Gagan, Jack D. Griffith, Anindya Dutta

    出版 2012
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  8. 8
    Regulation of several androgen-induced genes through the repression of the miR-99a/let-7c/miR-125b-2 miRNA cluster in prostate cancer cells

    Regulation of several androgen-induced genes through the repression of the miR-99a/let-7c/miR-125b-2 miRNA cluster in prostate cancer cells 由 Dongxiao Sun, Ryan M. Layer, Adam C. Mueller, Magdalena A. Cichewicz, Masahiko Negishi, Bryce M. Paschal, Anindya Dutta

    出版 2013
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  9. 9
    Samplot: a platform for structural variant visual validation and automated filtering

    Samplot: a platform for structural variant visual validation and automated filtering 由 Jonathan R. Belyeu, Murad Chowdhury, Joseph Brown, Brent S. Pedersen, Michael J. Cormier, Aaron R. Quinlan, Ryan M. Layer

    出版 2021
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  10. 10
    MUNC, a Long Noncoding RNA That Facilitates the Function of MyoD in Skeletal Myogenesis

    MUNC, a Long Noncoding RNA That Facilitates the Function of MyoD in Skeletal Myogenesis 由 Adam C. Mueller, Magdalena A. Cichewicz, Bijan K. Dey, Ryan M. Layer, Brian J. Reon, Jeffrey Gagan, Anindya Dutta

    出版 2014
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  11. 11
    svtools: population-scale analysis of structural variation

    svtools: population-scale analysis of structural variation 由 David E. Larson, Haley Abel, Colby Chiang, Abhijit Badve, Indraniel Das, James M. Eldred, Ryan M. Layer, Ira M. Hall

    出版 2019
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  12. 12
    Breakpoint profiling of 64 cancer genomes reveals numerous complex rearrangements spawned by homology-independent mechanisms

    Breakpoint profiling of 64 cancer genomes reveals numerous complex rearrangements spawned by homology-independent mechanisms 由 Ankit Malhotra, Michael Lindberg, Gregory G. Faust, Mitchell L. Leibowitz, Royden A. Clark, Ryan M. Layer, Aaron R. Quinlan, Ira M. Hall

    出版 2013
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  13. 13
    SpeedSeq: ultra-fast personal genome analysis and interpretation

    SpeedSeq: ultra-fast personal genome analysis and interpretation 由 Colby Chiang, Ryan M. Layer, Gregory G. Faust, Michael Lindberg, David B Rose, Erik Garrison, Gábor Marth, Aaron R. Quinlan, Ira M. Hall

    出版 2015
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  14. 14
    SV-plaudit: A cloud-based framework for manually curating thousands of structural variants

    SV-plaudit: A cloud-based framework for manually curating thousands of structural variants 由 Jonathan R. Belyeu, T. Nicholas, Brent S. Pedersen, Thomas A. Sasani, James M. Havrilla, Stephanie N. Kravitz, Megan E. Conway, Brian K. Lohman, Aaron R. Quinlan, Ryan M. Layer

    出版 2018
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  15. 15
    Whole-genome analysis for effective clinical diagnosis and gene discovery in early infantile epileptic encephalopathy

    Whole-genome analysis for effective clinical diagnosis and gene discovery in early infantile epileptic encephalopathy 由 Betsy Ostrander, Russell J. Butterfield, Brent S. Pedersen, Andrew Farrell, Ryan M. Layer, Alistair Ward, Chase Miller, Tonya DiSera, Francis Filloux, Meghan Candee, Tara Newcomb, Joshua L. Bonkowsky, Gábor Marth, Aaron R. Quinlan

    出版 2018
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  16. 16
    Mapping and characterization of structural variation in 17,795 human genomes

    Mapping and characterization of structural variation in 17,795 human genomes 由 Haley Abel, David E. Larson, Allison Regier, Colby Chiang, Indraniel Das, Krishna Kanchi, Ryan M. Layer, Benjamin M. Neale, William Salerno, Catherine Reeves, Steven Buyske, Tara C. Matise, Donna M. Muzny, Michael C. Zody, Eric S. Lander, Susan K. Dutcher, Nathan O. Stitziel, Ira M. Hall

    出版 2020
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  17. 17
    The structural variation landscape in 492 Atlantic salmon genomes

    The structural variation landscape in 492 Atlantic salmon genomes 由 Alicia C. Bertolotti, Ryan M. Layer, Manu Kumar Gundappa, Michael D. Gallagher, Ege Pehlivanoglu, Torfinn Nome, Diego Robledo, Matthew Kent, Line L. Røsæg, Matilde Mengkrog Holen, Teshome Mulugeta, Thomas J. Ashton, Kjetil Hindar, Harald Sægrov, Bjørn Florø‐Larsen, Jaakko Erkinaro, Craig R. Primmer, Louis Bernatchez, Samuel Martín, Ian A. Johnston, Simen R. Sandve, Sigbjørn Lien, Daniel J. Macqueen

    出版 2020
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  18. 18
    Combating subclonal evolution of resistant cancer phenotypes

    Combating subclonal evolution of resistant cancer phenotypes 由 Samuel W. Brady, Jasmine A. McQuerry, 義行 高橋, Stephen Piccolo, Gajendra Shrestha, David F. Jenkins, Ryan M. Layer, Brent S. Pedersen, R.H. Miller, Amanda Esch, Sara R. Selitsky, Joel S. Parker, Layla A. Anderson, Brian K. Dalley, Rachel E. Factor, Chakravarthy B. Reddy, Jonathan Boltax, Dean Y. Li, Philip J. Moos, Joe W. Gray, Laura M. Heiser, Saundra S. Buys, Adam L. Cohen, W. Evan Johnson, Aaron R. Quinlan, Gábor Marth, Theresa L. Werner, Andrea H. Bild

    出版 2017
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  19. 19
    A complete reference genome improves analysis of human genetic variation

    A complete reference genome improves analysis of human genetic variation 由 Sergey Aganezov, Stephanie M. Yan, Daniela C. Soto, Melanie Kirsche, Samantha Zarate, Pavel Avdeyev, Dylan J. Taylor, Kishwar Shafin, Alaina Shumate, Chunlin Xiao, Justin Wagner, Jennifer McDaniel, Nathan D. Olson, Michael Sauria, Mitchell R. Vollger, Arang Rhie, Melissa Meredith, Skylar Martin, Joyce Lee, Sergey Koren, Jeffrey Rosenfeld, Benedict Paten, Ryan M. Layer, Chen-Shan Chin, Fritz J. Sedlazeck, Nancy F. Hansen, Danny E. Miller, Adam M. Phillippy, Karen H. Miga, Rajiv C. McCoy, Megan Y. Dennis, Justin M. Zook, Michael C. Schatz

    出版 2021
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  20. 20
    A complete reference genome improves analysis of human genetic variation

    A complete reference genome improves analysis of human genetic variation 由 Sergey Aganezov, Stephanie M. Yan, Daniela C. Soto, Melanie Kirsche, Samantha Zarate, Pavel Avdeyev, Dylan J. Taylor, Kishwar Shafin, Alaina Shumate, Chunlin Xiao, Justin Wagner, Jennifer McDaniel, Nathan D. Olson, Michael Sauria, Mitchell R. Vollger, Arang Rhie, Melissa Meredith, Skylar Martin, Joyce Lee, Sergey Koren, Jeffrey Rosenfeld, Benedict Paten, Ryan M. Layer, Chen-Shan Chin, Fritz J. Sedlazeck, Nancy F. Hansen, Danny E. Miller, Adam M. Phillippy, Karen H. Miga, Rajiv C. McCoy, Megan Y. Dennis, Justin M. Zook, Michael C. Schatz

    出版 2022
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