Rezultati - Robert Baertsch

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  1. 1
    Using native and syntenically mapped cDNA alignments to improve <i>de novo</i> gene finding

    Using native and syntenically mapped cDNA alignments to improve <i>de novo</i> gene finding od Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler

    Izdano 2008
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  2. 2
    Pathway-Based Genomics Prediction using Generalized Elastic Net

    Pathway-Based Genomics Prediction using Generalized Elastic Net od Artem Sokolov, Yichao Li, Evan Paull, Robert Baertsch, Joshua M. Stuart

    Izdano 2016
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  3. 3
    Mosaic retroposon insertion patterns in placental mammals

    Mosaic retroposon insertion patterns in placental mammals od Gennady Churakov, Jan Ole Kriegs, Robert Baertsch, Anja Zemann, Jürgen Brosius, Jürgen Schmitz

    Izdano 2009
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  4. 4
    The Structure of a Rigorously Conserved RNA Element within the SARS Virus Genome

    The Structure of a Rigorously Conserved RNA Element within the SARS Virus Genome od Michael P. Robertson, Haller Igel, Robert Baertsch, David Haussler, Manuel Ares, W. G. Scott

    Izdano 2004
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  5. 5
    Human–Mouse Alignments with BLASTZ

    Human–Mouse Alignments with BLASTZ od Scott Schwartz, W. James Kent, Arian F. A. Smit, Zheng Zhang, Robert Baertsch, Ross C. Hardison, David Haussler, Webb Miller

    Izdano 2002
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  6. 6
    A basal stem cell signature identifies aggressive prostate cancer phenotypes

    A basal stem cell signature identifies aggressive prostate cancer phenotypes od B. Smith, Artem Sokolov, Vladislav Uzunangelov, Robert Baertsch, Yulia Newton, Kiley Graim, Colleen Mathis, Donghui Cheng, Joshua M. Stuart, Owen N. Witte

    Izdano 2015
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  7. 7
    Aligning Multiple Genomic Sequences With the Threaded Blockset Aligner

    Aligning Multiple Genomic Sequences With the Threaded Blockset Aligner od Mathieu Blanchette, W. James Kent, Cathy Riemer, Laura Elnitski, Arian F. A. Smit, Krishna M. Roskin, Robert Baertsch, Kate R. Rosenbloom, Hiram Clawson, Eric D. Green, David Haussler, Webb Miller

    Izdano 2004
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  8. 8
    Forces Shaping the Fastest Evolving Regions in the Human Genome

    Forces Shaping the Fastest Evolving Regions in the Human Genome od Katherine S. Pollard, Sofie R. Salama, Bryan H. King, Andrew D. Kern, Timothy R. Dreszer, Sol Katzman, Adam Siepel, Jakob Skou Pedersen, Gill Bejerano, Robert Baertsch, Kate R. Rosenbloom, Jim Kent, David Haussler

    Izdano 2006
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  9. 9
    Pseudogenes in the ENCODE regions: Consensus annotation, analysis of transcription, and evolution

    Pseudogenes in the ENCODE regions: Consensus annotation, analysis of transcription, and evolution od Deyou Zheng, Adam Frankish, Robert Baertsch, Philipp Kapranov, Alexandre Reymond, Siew Woh Choo, Yontao Lu, France Denœud, Stylianos E. Antonarakis, M Snyder, Yijun Ruan, Chia‐Lin Wei, T Gingeras, Roderic Guigó, Jennifer Harrow, Mark Gerstein

    Izdano 2007
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  10. 10
    TumorMap: Exploring the Molecular Similarities of Cancer Samples in an Interactive Portal

    TumorMap: Exploring the Molecular Similarities of Cancer Samples in an Interactive Portal od Yulia Newton, Adam M. Novak, Teresa Swatloski, Duncan C. McColl, Sahil Chopra, Kiley Graim, Alana S. Weinstein, Robert Baertsch, Sofie R. Salama, Kyle Ellrott, M. R. Chopra, Theodore C. Goldstein, David Haussler, Olena Morozova, Joshua M. Stuart

    Izdano 2017
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  11. 11
    N-Myc Drives Neuroendocrine Prostate Cancer Initiated from Human Prostate Epithelial Cells

    N-Myc Drives Neuroendocrine Prostate Cancer Initiated from Human Prostate Epithelial Cells od John K. Lee, John W. Phillips, B. Smith, Jung Wook Park, Tanya Stoyanova, Erin McCaffrey, Robert Baertsch, Artem Sokolov, Justin Meyerowitz, Colleen Mathis, Donghui Cheng, Joshua M. Stuart, Kevan M. Shokat, W. Clay Gustafson, Jiaoti Huang, Owen N. Witte

    Izdano 2016
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  12. 12
    The UCSC Genome Browser Database: 2008 update

    The UCSC Genome Browser Database: 2008 update od Donna Karolchik, Robert M. Kuhn, Robert Baertsch, G. P. Barber, Hiram Clawson, Mark Diekhans, Belinda Giardine, Rachel Harte, Angie S. Hinrichs, F. Hsu, Kord M. Kober, Webb Miller, Jakob Skou Pedersen, A. Pohl, Brian J. Raney, Brooke Rhead, Kate R. Rosenbloom, Kayla Smith, Mario Stanke, A. Thakkapallayil, Heather Trumbower, Ting Wang, Ann S. Zweig, David Haussler, W. James Kent

    Izdano 2007
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  13. 13
    The UCSC genome browser database: update 2007

    The UCSC genome browser database: update 2007 od Robert M. Kuhn, Donna Karolchik, Ann S. Zweig, Heather Trumbower, Daniel Thomas, A. Thakkapallayil, Charles W. Sugnet, Mario Stanke, Kayla Smith, Adam Siepel, Kate R. Rosenbloom, Brooke Rhead, Brian J. Raney, A. Pohl, Jakob Skou Pedersen, F. Hsu, Angie S. Hinrichs, Rachel Harte, Mark Diekhans, Hiram Clawson, Gill Bejerano, G. P. Barber, Robert Baertsch, David Haussler, W. James Kent

    Izdano 2006
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  14. 14
    The UCSC Genome Browser Database: update 2006

    The UCSC Genome Browser Database: update 2006 od Angie S. Hinrichs, Donna Karolchik, Robert Baertsch, G. P. Barber, Gill Bejerano, Hiram Clawson, Mark Diekhans, Terrence S. Furey, Rachel Harte, F. Hsu, Jennifer Hillman‐Jackson, Robert M. Kuhn, Jakob Skou Pedersen, A. Pohl, Brian J. Raney, Kate R. Rosenbloom, Adam Siepel, Kinley Smith, Charles W. Sugnet, A Sultan-Qurraie, Daniel Thomas, Heather Trumbower, R. Weber, Matt Weirauch, Ann S. Zweig, David Haussler, W. James Kent

    Izdano 2005
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  15. 15
    28-Way vertebrate alignment and conservation track in the UCSC Genome Browser

    28-Way vertebrate alignment and conservation track in the UCSC Genome Browser od Webb Miller, Kate R. Rosenbloom, Ross C. Hardison, Minmei Hou, James Taylor, Brian J. Raney, Richard Burhans, David King, Robert Baertsch, Daniel Blankenberg, Sergei L. Kosakovsky Pond, Anton Nekrutenko, Belinda Giardine, Robert S. Harris, Svitlana Tyekucheva, Mark Diekhans, Thomas H. Pringle, William J. Murphy, Arthur M. Lesk, George M. Weinstock, Kerstin Lindblad‐Toh, Richard A. Gibbs, Eric S. Lander, Adam Siepel, David Haussler, W. James Kent

    Izdano 2007
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  16. 16
    MEK-ERK signaling is a therapeutic target in metastatic castration resistant prostate cancer

    MEK-ERK signaling is a therapeutic target in metastatic castration resistant prostate cancer od Nicholas G. Nickols, Ramin Nazarian, Shuang G. Zhao, Victor M. Tan, Vladislav Uzunangelov, Zheng Xia, Robert Baertsch, Elad Neeman, Allen C. Gao, George Thomas, Lauren E. Howard, Amanda M. De Hoedt, Joshua M. Stuart, Theodore C. Goldstein, Kim Chi, Martin Gleave, Julie N. Graff, Tomasz M. Beer, Justin M. Drake, Christopher P. Evans, Rahul Aggarwal, Adam Foye, Felix Y. Feng, Eric J. Small, William J. Aronson, Stephen J. Freedland, Owen N. Witte, Jiaoti Huang, Joshi J. Alumkal, Robert E. Reiter, Matthew B. Rettig

    Izdano 2019
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  17. 17
    Current status and new features of the Consensus Coding Sequence database

    Current status and new features of the Consensus Coding Sequence database od Catherine M. Farrell, Nuala A. O’Leary, Rachel Harte, Jane Loveland, Laurens Wilming, Craig Wallin, Mark Diekhans, Daniel Barrell, Stephen M. J. Searle, Bronwen Aken, Susan M. Hiatt, Adam Frankish, Marie‐Marthe Suner, Bhanu Rajput, Charles A. Steward, Garth Brown, Ruth Bennett, Michael R. Murphy, Wendy Wu, Mike Kay, Jennifer Hart, Jeena Rajan, Janet A. Weber, Catherine Snow, Lillian D. Riddick, Toby Hunt, David Webb, Mark Thomas, Pamela Tamez, Sanjida H Rangwala, Kelly M. McGarvey, Shashikant Pujar, Andrei Shkeda, Jonathan M. Mudge, José M. González, James Gilbert, Stephen J. Trevanion, Robert Baertsch, Jennifer Harrow, Tim Hubbard, James M. Ostell, David Haussler, Kim D. Pruitt

    Izdano 2013
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  18. 18
    The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes

    The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes od Kim D. Pruitt, Jennifer Harrow, Rachel Harte, Craig Wallin, Mark Diekhans, Donna Maglott, Steve Searle, Catherine M. Farrell, Jane Loveland, Barbara J. Ruef, Elizabeth A. Hart, Marie‐Marthe Suner, Melissa Landrum, Bronwen Aken, Sarah Ayling, Robert Baertsch, Julio Fernandez-Banet, Joshua L. Cherry, Val Curwen, Michael DiCuccio, Manolis Kellis, Jennifer Lee, Michael F. Lin, Michael Schuster, Andrew Shkeda, Clara Amid, Garth Brown, Oksana I. Dukhanina, Adam Frankish, Jennifer Hart, B. Maidak, Jonathan M. Mudge, Michael R. Murphy, Terence D. Murphy, Jeena Rajan, Bhanu Rajput, Lillian D. Riddick, Catherine Snow, Charles A. Steward, David Webb, Janet A. Weber, Laurens Wilming, Wenyu Wu, Ewan Birney, David Haussler, Tim Hubbard, James Ostell, Richard Durbin, David J. Lipman

    Izdano 2009
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  19. 19
    Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

    Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project od Ewan Birney, J Stamatoyannopoulos, Anindya Dutta, Roderic Guigó, T Gingeras, Elliott H. Margulies, Zhiping Weng, M Snyder, Emmanouil T. Dermitzakis, Robert E. Thurman, Michael S. Kuehn, Christopher M. Taylor, Shane Neph, Christof Koch, Saurabh Asthana, Ankit Malhotra, Ivan Adzhubei, Jason Greenbaum, Robert Andrews, Paul Flicek, Patrick J. Boyle, Hua Cao, N. P. Carter, Gayle K. Clelland, Sean Davis, Nathan Day, Pawandeep Dhami, Shane C. Dillon, Michael O. Dorschner, Heike Fiegler, Paul G. Giresi, Jeff Goldy, Michael Hawrylycz, Andrew Haydock, Richard Humbert, Keith James, Brett Johnson, Ericka M. Johnson, Tristan Frum, Elizabeth Rosenzweig, Neerja Karnani, Kirsten Lee, Grégory Lefebvre, Patrick A. Navas, Fidencio Neri, Stephen C. J. Parker, Peter J. Sabo, Richard Sandstrom, Anthony Shafer, David Vetrie, Molly Weaver, Sarah Wilcox, Man Yu, Francis S. Collins, Job Dekker, Jason D. Lieb, Thomas D. Tullius, Gregory E. Crawford, Shamil Sunyaev, William Stafford Noble, Ian Dunham, Alexandre Reymond, Philipp Kapranov, Joel Rozowsky, Deyou Zheng, Robert Castelo, Adam Frankish, Jennifer Harrow, Srinka Ghosh, Albin Sandelin, Ivo L. Hofacker, Robert Baertsch, Damian Keefe, Sujit Dike, Jill Cheng, Heather A. Hirsch, Edward A. Sekinger, Julien Lagarde, Josep F. Abril, Atif Shahab, Christoph Flamm, Claudia Fried, Jörg Hackermüller, Jana Hertel, Manja Lindemeyer, Kristin Missal, Andrea Tanzer, Stefan Washietl, Jan O. Korbel, Olof Emanuelsson, Jakob Skou Pedersen, Nancy Holroyd, Ruth Taylor, David Swarbreck, Nicholas Matthews, Mark Dickson, Daryl J. Thomas, Matthew T. Weirauch, James Gilbert, Jörg Drenkow

    Izdano 2007
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  20. 20
    The DNA sequence of human chromosome 7

    The DNA sequence of human chromosome 7 od LaDeana W. Hillier, Robert S. Fulton, Lucinda A. Fulton, Tina Graves, Kymberlie Pepin, Caryn Wagner-McPherson, Dan Layman, Jason E. Maas, Sara R. Jaeger, Rebecca Walker, Kristine M. Wylie, Mandeep Sekhon, Michael C. Becker, Michelle D. O’Laughlin, Mark E. Schaller, Ginger Fewell, Kimberly D. Delehaunty, Tracie L. Miner, William E. Nash, M. Cordes, Hui Du, Hui Sun, Jennifer Edwards, Holland Bradshaw-Cordum, Johar Ali, S. Andrews, Amber Isak, Andrew VanBrunt, Christine Nguyen, Feiyu Du, Betty Lamar, Laura Courtney, Joelle Kalicki, Philip Ozersky, Lauren Bielicki, Kelsi Scott, Andrea E. Holmes, Richard Harkins, Anthony Harris, Cynthia Madsen Strong, Shunfang Hou, Chad Tomlinson, Sara Dauphin-Kohlberg, Amy Kozlowicz-Reilly, Shawn Leonard, Theresa Rohlfing, Susan M. Rock, Aye-Mon Tin-Wollam, A. Abbott, Patrick Minx, Rachel Maupin, Catrina Strowmatt, Phil Latreille, Nancy Miller, D R Johnson, J. Murray, Jeffrey P. Woessner, Michael C. Wendl, Shiaw‐Pyng Yang, Brian Schultz, John W. Wallis, John Spieth, Tamberlyn Bieri, Joanne O. Nelson, Nicolas Berkowicz, P. Wohldmann, Lisa L. Cook, Matthew T. Hickenbotham, James M. Eldred, Donald Williams, Joseph A. Bedell, Elaine R. Mardis, Sandra W. Clifton, Stephanie L. Chissoe, Marco A. Marra, Christopher K. Raymond, Eric Haugen, Will Gillett, Yang Zhou, R. Lupski James, Karen A. Phelps, Shawn Iadanoto, Kerry L. Bubb, Elizabeth Simms, Ruth Levy, James B. Clendenning, Rajinder Kaul, W. James Kent, Terrence S. Furey, Robert Baertsch, Michael R. Brent, Evan Keibler, Paul Flicek, Peer Bork, Mikita Suyama, Jeffrey A. Bailey, Matthew E. Portnoy, David Torrents, Asif Chinwalla, Warren Gish

    Izdano 2003
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