Search Results - Richa Agarwala

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  1. 1
    COBALT: constraint-based alignment tool for multiple protein sequences

    COBALT: constraint-based alignment tool for multiple protein sequences by Jason S. Papadopoulos, Richa Agarwala

    Published 2007
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  2. 2
    SKESA: strategic k-mer extension for scrupulous assemblies

    SKESA: strategic k-mer extension for scrupulous assemblies by Alexandre Souvorov, Richa Agarwala, David J. Lipman

    Published 2018
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  3. 3
    Improved BLAST searches using longer words for protein seeding

    Improved BLAST searches using longer words for protein seeding by Sergey Shiryev, Jason S. Papadopoulos, Alejandro A. Schäffer, Richa Agarwala

    Published 2007
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  4. 4
    A Fast and Scalable Radiation Hybrid Map Construction and Integration Strategy

    A Fast and Scalable Radiation Hybrid Map Construction and Integration Strategy by Richa Agarwala, David Applegate, Donna Maglott, Gregory D. Schuler, Alejandro A. Schäffer

    Published 2000
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  5. 5
    Software for Constructing and Verifying Pedigrees within Large Genealogies and an Application to the Old Order Amish of Lancaster County

    Software for Constructing and Verifying Pedigrees within Large Genealogies and an Application to the Old Order Amish of Lancaster County by Richa Agarwala, Leslie G. Biesecker, Katherine Hopkins, Clair A. Francomano, Alejandro A. Schäffer

    Published 1998
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  6. 6
    Database indexing for production MegaBLAST searches

    Database indexing for production MegaBLAST searches by Aleksandr Morgulis, George Coulouris, Yan Raytselis, Thomas Madden, Richa Agarwala, Alejandro A. Schäffer

    Published 2008
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  7. 7
    PSI-BLAST pseudocounts and the minimum description length principle

    PSI-BLAST pseudocounts and the minimum description length principle by Stephen F. Altschul, E. Michael Gertz, Richa Agarwala, Alejandro A. Schäffer, Yi‐Kuo Yu

    Published 2008
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  8. 8
    Composition-based statistics and translated nucleotide searches: Improving the TBLASTN module of BLAST

    Composition-based statistics and translated nucleotide searches: Improving the TBLASTN module of BLAST by E. Michael Gertz, Yi‐Kuo Yu, Richa Agarwala, Alejandro A. Schäffer, Stephen F. Altschul

    Published 2006
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  9. 9
    Application of dissociation curve analysis to radiation hybrid panel marker scoring: generation of a map of river buffalo (B. bubalis) chromosome 20

    Application of dissociation curve analysis to radiation hybrid panel marker scoring: generation of a map of river buffalo (B. bubalis) chromosome 20 by Kelli J. Kochan, M.E.J. Amaral, Richa Agarwala, Alejandro A. Schäffer, Penny K. Riggs

    Published 2008
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  10. 10
    Domain enhanced lookup time accelerated BLAST

    Domain enhanced lookup time accelerated BLAST by Grzegorz M. Boratyn, Alejandro A. Schäffer, Richa Agarwala, Stephen F. Altschul, David J. Lipman, Thomas Madden

    Published 2012
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  11. 11
    Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model

    Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model by Richa Agarwala, Serafim Batzoglou, Vlado Dančík, Scott E. Decatur, Martı́n Farach-Colton, Sridhar Hannenhalli, S. Muthukrishnan, Steven Skiena

    Published 1997
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  12. 12
    The <i>Sox10<sup>Dom</sup></i> Mouse: Modeling the Genetic Variation of Waardenburg-Shah (WS4) Syndrome

    The <i>Sox10<sup>Dom</sup></i> Mouse: Modeling the Genetic Variation of Waardenburg-Shah (WS4) Syndrome by E. Michelle Southard‐Smith, Misha Angrist, Jane Ellison, Richa Agarwala, Andreas D. Baxevanis, Aravinda Chakravarti, William J. Pavan

    Published 1999
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  13. 13
    Construction of a river buffalo<i>(Bubalus bubalis)</i>whole-genome radiation hybrid panel and preliminary RH mapping of chromosomes 3 and 10

    Construction of a river buffalo<i>(Bubalus bubalis)</i>whole-genome radiation hybrid panel and preliminary RH mapping of chromosomes 3 and 10 by M.E.J. Amaral, K.E. Owens, Janice S. Elliott, C. Fickey, Alejandro A. Schäffer, Richa Agarwala, James E. Womack

    Published 2007
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  14. 14
    Construction of a river buffalo (<i>Bubalus bubalis</i>) whole‐genome radiation hybrid panel and preliminary RH mapping of chromosomes 3 and 10

    Construction of a river buffalo (<i>Bubalus bubalis</i>) whole‐genome radiation hybrid panel and preliminary RH mapping of chromosomes 3 and 10 by M.E.J. Amaral, K.E. Owens, Janice S. Elliott, C. Fickey, Alejandro A. Schäffer, Richa Agarwala, James E. Womack

    Published 2007
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  15. 15
    Protein database searches using compositionally adjusted substitution matrices

    Protein database searches using compositionally adjusted substitution matrices by Stephen F. Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schäffer, Yi‐Kuo Yu

    Published 2005
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  16. 16
    Novel Gene Acquisition on Carnivore Y Chromosomes

    Novel Gene Acquisition on Carnivore Y Chromosomes by William J. Murphy, Alison J. Pearks Wilkerson, Terje Raudsepp, Richa Agarwala, Alejandro A. Schäffer, Roscoe Stanyon, Bhanu P. Chowdhary

    Published 2006
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  17. 17
    A radiation hybrid map of river buffalo &lt;i&gt;(Bubalus bubalis)&lt;/i&gt; chromosome 7 and comparative mapping to the cattle and human genomes

    A radiation hybrid map of river buffalo &lt;i&gt;(Bubalus bubalis)&lt;/i&gt; chromosome 7 and comparative mapping to the cattle and human genomes by Tom Goldammer, Rosemarie Weikard, M.N. Miziara, Ronald M. Brunner, Richa Agarwala, Alejandro A. Schäffer, J.E. Womack, M.E.J. Amaral

    Published 2007
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  18. 18
    Preliminary comparative RH mapping between river buffalo chromosome 6 (BBU6) and bovine chromosome 3 (BTA3)

    Preliminary comparative RH mapping between river buffalo chromosome 6 (BBU6) and bovine chromosome 3 (BTA3) by Nedenia Bonvino Stafuzza, P. Ianella, M.N. Miziara, Richa Agarwala, A.A. Schäffer, Penny K. Riggs, J.E. Womack, M.E.J. Amaral

    Published 2010
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  19. 19
    A Novel Nemaline Myopathy in the Amish Caused by a Mutation in Troponin T1

    A Novel Nemaline Myopathy in the Amish Caused by a Mutation in Troponin T1 by Jennifer J. Johnston, Richard I. Kelley, Thomas O. Crawford, D. Holmes Morton, Richa Agarwala, Thorsten Koch, Alejandro A. Schäffer, Clair A. Francomano, Leslie G. Biesecker

    Published 2000
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  20. 20
    The National Center for Biotechnology Information's Protein Clusters Database

    The National Center for Biotechnology Information's Protein Clusters Database by William Klimke, Richa Agarwala, Azat Badretdin, Slava Chetvernin, Stacy Ciufo, Boris Fedorov, Boris Kiryutin, Kathleen O’Neill, Wolfgang Resch, Sergei Resenchuk, Susan Schafer, Igor Tolstoy, Tatiana Tatusova

    Published 2008
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